EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015022118 (Gene tree)
Gene ID: 108921151
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6417 bases
Position: chrKV410805.1:346036-352452
Accession: 108921151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034727	PRP4	PF08799.11	1.3e-13	1	1
ENSSFOP00015034717	PRP4	PF08799.11	1.7e-13	1	1
ENSSFOP00015034717	Prp18	PF02840.15	4.8e-62	1	1
ENSSFOP00015034727	Prp18	PF02840.15	1.7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015035107	-	975	-	ENSSFOP00015034727	324 (aa)	-	-
ENSSFOT00015035097	-	1357	XM_018730481	ENSSFOP00015034717	421 (aa)	XP_018585997	-

Gene Model

Click here to download ENSSFOG00015022118's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015022118	prpf18	66	52.558	ENSSFOG00015021154	-	89	52.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022118	prpf18	100	76.945	ENSG00000165630	PRPF18	98	81.449	Homo_sapiens
ENSSFOG00015022118	prpf18	100	82.749	ENSAPOG00000024177	prpf18	98	86.377	Acanthochromis_polyacanthus
ENSSFOG00015022118	prpf18	100	76.945	ENSAMEG00000013591	-	98	81.449	Ailuropoda_melanoleuca
ENSSFOG00015022118	prpf18	100	81.844	ENSACIG00000001186	prpf18	98	86.087	Amphilophus_citrinellus
ENSSFOG00015022118	prpf18	98	80.588	ENSAOCG00000006572	prpf18	94	86.297	Amphiprion_ocellaris
ENSSFOG00015022118	prpf18	100	80.980	ENSAPEG00000004564	prpf18	98	86.087	Amphiprion_percula
ENSSFOG00015022118	prpf18	100	81.268	ENSATEG00000000303	prpf18	98	85.507	Anabas_testudineus
ENSSFOG00015022118	prpf18	99	76.522	ENSAPLG00000003387	-	98	82.216	Anas_platyrhynchos
ENSSFOG00015022118	prpf18	100	76.791	ENSACAG00000000818	-	98	82.709	Anolis_carolinensis
ENSSFOG00015022118	prpf18	100	77.233	ENSANAG00000037445	-	98	83.188	Aotus_nancymaae
ENSSFOG00015022118	prpf18	100	81.556	ENSACLG00000026296	prpf18	98	85.217	Astatotilapia_calliptera
ENSSFOG00015022118	prpf18	100	79.437	ENSAMXG00000012848	prpf18	98	87.246	Astyanax_mexicanus
ENSSFOG00015022118	prpf18	100	76.945	ENSBTAG00000017244	PRPF18	98	82.899	Bos_taurus
ENSSFOG00015022118	prpf18	98	38.636	WBGene00009320	F32B6.3	96	40.173	Caenorhabditis_elegans
ENSSFOG00015022118	prpf18	100	77.233	ENSCJAG00000009432	-	98	83.188	Callithrix_jacchus
ENSSFOG00015022118	prpf18	100	76.945	ENSCAFG00000004735	-	98	81.449	Canis_familiaris
ENSSFOG00015022118	prpf18	100	76.945	ENSCAFG00020007712	-	98	81.449	Canis_lupus_dingo
ENSSFOG00015022118	prpf18	100	76.945	ENSCHIG00000000499	-	98	82.899	Capra_hircus
ENSSFOG00015022118	prpf18	100	76.657	ENSTSYG00000003517	-	98	82.319	Carlito_syrichta
ENSSFOG00015022118	prpf18	100	76.945	ENSCPOG00000021069	-	98	82.609	Cavia_porcellus
ENSSFOG00015022118	prpf18	100	77.233	ENSCCAG00000036822	-	98	83.188	Cebus_capucinus
ENSSFOG00015022118	prpf18	100	67.723	ENSCATG00000016633	-	98	71.014	Cercocebus_atys
ENSSFOG00015022118	prpf18	100	76.657	ENSCLAG00000011770	-	98	82.319	Chinchilla_lanigera
ENSSFOG00015022118	prpf18	100	75.000	ENSCSAG00000013109	-	98	82.899	Chlorocebus_sabaeus
ENSSFOG00015022118	prpf18	100	74.238	ENSCPBG00000003100	-	98	80.223	Chrysemys_picta_bellii
ENSSFOG00015022118	prpf18	99	53.043	ENSCING00000020481	-	96	56.433	Ciona_intestinalis
ENSSFOG00015022118	prpf18	99	53.026	ENSCSAVG00000010546	-	97	55.848	Ciona_savignyi
ENSSFOG00015022118	prpf18	100	77.233	ENSCANG00000034900	-	98	83.188	Colobus_angolensis_palliatus
ENSSFOG00015022118	prpf18	100	76.945	ENSCGRG00001023665	Prpf18	98	81.739	Cricetulus_griseus_chok1gshd
ENSSFOG00015022118	prpf18	100	76.945	ENSCGRG00000014690	Prpf18	98	81.739	Cricetulus_griseus_crigri
ENSSFOG00015022118	prpf18	100	84.098	ENSCSEG00000005536	prpf18	100	84.098	Cynoglossus_semilaevis
ENSSFOG00015022118	prpf18	100	80.851	ENSCVAG00000012401	prpf18	98	84.348	Cyprinodon_variegatus
ENSSFOG00015022118	prpf18	100	80.172	ENSDARG00000058306	prpf18	98	86.705	Danio_rerio
ENSSFOG00015022118	prpf18	100	76.657	ENSDNOG00000035607	-	98	81.159	Dasypus_novemcinctus
ENSSFOG00015022118	prpf18	100	76.369	ENSDORG00000000858	Prpf18	98	80.580	Dipodomys_ordii
ENSSFOG00015022118	prpf18	99	48.397	FBgn0027784	Prp18	97	50.289	Drosophila_melanogaster
ENSSFOG00015022118	prpf18	100	69.452	ENSETEG00000015060	-	98	74.128	Echinops_telfairi
ENSSFOG00015022118	prpf18	100	65.341	ENSEBUG00000016502	prpf18	98	68.588	Eptatretus_burgeri
ENSSFOG00015022118	prpf18	100	77.233	ENSEASG00005019373	-	98	83.188	Equus_asinus_asinus
ENSSFOG00015022118	prpf18	100	80.480	ENSECAG00000006997	PRPF18	98	83.188	Equus_caballus
ENSSFOG00015022118	prpf18	92	42.812	ENSEEUG00000001171	-	100	49.846	Erinaceus_europaeus
ENSSFOG00015022118	prpf18	100	78.448	ENSELUG00000022190	prpf18	98	84.682	Esox_lucius
ENSSFOG00015022118	prpf18	100	76.945	ENSFCAG00000004436	-	98	82.899	Felis_catus
ENSSFOG00015022118	prpf18	92	74.242	ENSFALG00000001912	-	97	83.077	Ficedula_albicollis
ENSSFOG00015022118	prpf18	99	52.286	ENSFDAG00000010713	-	95	55.977	Fukomys_damarensis
ENSSFOG00015022118	prpf18	93	78.462	ENSFDAG00000014026	-	98	83.282	Fukomys_damarensis
ENSSFOG00015022118	prpf18	79	82.014	ENSFHEG00000020125	prpf18	95	90.385	Fundulus_heteroclitus
ENSSFOG00015022118	prpf18	99	75.434	ENSGMOG00000012210	prpf18	98	79.710	Gadus_morhua
ENSSFOG00015022118	prpf18	100	77.522	ENSGALG00000043593	-	98	83.478	Gallus_gallus
ENSSFOG00015022118	prpf18	100	79.827	ENSGAFG00000006034	prpf18	98	84.348	Gambusia_affinis
ENSSFOG00015022118	prpf18	100	77.522	ENSGACG00000012232	prpf18	98	81.159	Gasterosteus_aculeatus
ENSSFOG00015022118	prpf18	100	77.522	ENSGAGG00000016878	-	98	83.478	Gopherus_agassizii
ENSSFOG00015022118	prpf18	92	75.078	ENSGGOG00000025188	-	96	82.154	Gorilla_gorilla
ENSSFOG00015022118	prpf18	100	81.556	ENSHBUG00000010264	prpf18	98	86.667	Haplochromis_burtoni
ENSSFOG00015022118	prpf18	100	76.657	ENSHGLG00000018534	PRPF18	98	80.870	Heterocephalus_glaber_female
ENSSFOG00015022118	prpf18	94	78.287	ENSHGLG00100012161	-	97	82.769	Heterocephalus_glaber_male
ENSSFOG00015022118	prpf18	100	79.827	ENSHCOG00000015987	prpf18	98	84.638	Hippocampus_comes
ENSSFOG00015022118	prpf18	100	76.536	ENSIPUG00000007432	prpf18	98	83.862	Ictalurus_punctatus
ENSSFOG00015022118	prpf18	100	76.945	ENSSTOG00000008735	-	98	82.319	Ictidomys_tridecemlineatus
ENSSFOG00015022118	prpf18	100	76.945	ENSJJAG00000024041	-	98	81.449	Jaculus_jaculus
ENSSFOG00015022118	prpf18	100	64.308	ENSJJAG00000015191	-	100	64.308	Jaculus_jaculus
ENSSFOG00015022118	prpf18	100	85.231	ENSKMAG00000012124	prpf18	100	85.231	Kryptolebias_marmoratus
ENSSFOG00015022118	prpf18	100	75.504	ENSLBEG00000028466	prpf18	98	79.420	Labrus_bergylta
ENSSFOG00015022118	prpf18	100	79.827	ENSLACG00000009885	prpf18	98	85.507	Latimeria_chalumnae
ENSSFOG00015022118	prpf18	100	81.844	ENSLOCG00000016736	prpf18	98	88.696	Lepisosteus_oculatus
ENSSFOG00015022118	prpf18	100	76.945	ENSLAFG00000007753	-	98	81.449	Loxodonta_africana
ENSSFOG00015022118	prpf18	100	76.945	ENSMFAG00000000540	-	98	82.899	Macaca_fascicularis
ENSSFOG00015022118	prpf18	100	76.945	ENSMMUG00000015071	PRPF18	99	88.199	Macaca_mulatta
ENSSFOG00015022118	prpf18	100	76.945	ENSMNEG00000024679	-	98	82.899	Macaca_nemestrina
ENSSFOG00015022118	prpf18	100	61.960	ENSMLEG00000031715	-	98	66.377	Mandrillus_leucophaeus
ENSSFOG00015022118	prpf18	100	80.692	ENSMAMG00000006610	prpf18	98	86.377	Mastacembelus_armatus
ENSSFOG00015022118	prpf18	100	81.556	ENSMZEG00005019392	prpf18	98	86.667	Maylandia_zebra
ENSSFOG00015022118	prpf18	100	77.522	ENSMGAG00000005023	-	98	83.188	Meleagris_gallopavo
ENSSFOG00015022118	prpf18	100	79.167	ENSMICG00000006572	-	98	82.609	Microcebus_murinus
ENSSFOG00015022118	prpf18	100	76.945	ENSMOCG00000021468	Prpf18	98	81.449	Microtus_ochrogaster
ENSSFOG00015022118	prpf18	100	80.403	ENSMMOG00000013012	prpf18	98	84.638	Mola_mola
ENSSFOG00015022118	prpf18	100	68.588	ENSMODG00000024043	-	98	73.043	Monodelphis_domestica
ENSSFOG00015022118	prpf18	96	71.720	ENSMODG00000016902	-	92	80.178	Monodelphis_domestica
ENSSFOG00015022118	prpf18	100	77.035	ENSMALG00000005486	prpf18	100	77.035	Monopterus_albus
ENSSFOG00015022118	prpf18	100	76.657	MGP_CAROLIEiJ_G0023143	Prpf18	100	93.151	Mus_caroli
ENSSFOG00015022118	prpf18	100	76.657	ENSMUSG00000039449	Prpf18	100	93.151	Mus_musculus
ENSSFOG00015022118	prpf18	100	76.657	MGP_PahariEiJ_G0019203	Prpf18	100	93.151	Mus_pahari
ENSSFOG00015022118	prpf18	100	76.657	MGP_SPRETEiJ_G0024061	Prpf18	100	93.151	Mus_spretus
ENSSFOG00015022118	prpf18	100	76.657	ENSMPUG00000000938	-	98	81.159	Mustela_putorius_furo
ENSSFOG00015022118	prpf18	100	76.945	ENSMLUG00000009200	-	98	81.449	Myotis_lucifugus
ENSSFOG00015022118	prpf18	100	76.945	ENSNGAG00000012500	-	98	81.449	Nannospalax_galili
ENSSFOG00015022118	prpf18	68	68.016	ENSNGAG00000023550	-	81	82.667	Nannospalax_galili
ENSSFOG00015022118	prpf18	100	81.556	ENSNBRG00000001778	prpf18	98	85.217	Neolamprologus_brichardi
ENSSFOG00015022118	prpf18	100	76.945	ENSNLEG00000012186	-	98	82.899	Nomascus_leucogenys
ENSSFOG00015022118	prpf18	100	54.971	ENSMEUG00000005032	-	100	54.971	Notamacropus_eugenii
ENSSFOG00015022118	prpf18	76	58.889	ENSOPRG00000002153	-	100	61.314	Ochotona_princeps
ENSSFOG00015022118	prpf18	100	76.369	ENSODEG00000003770	-	98	80.580	Octodon_degus
ENSSFOG00015022118	prpf18	98	81.176	ENSONIG00000014854	prpf18	96	85.465	Oreochromis_niloticus
ENSSFOG00015022118	prpf18	100	76.945	ENSOANG00000015404	-	98	82.899	Ornithorhynchus_anatinus
ENSSFOG00015022118	prpf18	100	76.657	ENSOCUG00000027756	-	94	82.121	Oryctolagus_cuniculus
ENSSFOG00015022118	prpf18	100	79.832	ENSORLG00000010293	prpf18	98	86.377	Oryzias_latipes
ENSSFOG00015022118	prpf18	100	86.769	ENSORLG00020001530	prpf18	100	86.769	Oryzias_latipes_hni
ENSSFOG00015022118	prpf18	100	80.980	ENSORLG00015013705	prpf18	98	86.087	Oryzias_latipes_hsok
ENSSFOG00015022118	prpf18	100	81.844	ENSOMEG00000009167	prpf18	98	86.377	Oryzias_melastigma
ENSSFOG00015022118	prpf18	100	76.081	ENSOGAG00000007294	-	98	80.580	Otolemur_garnettii
ENSSFOG00015022118	prpf18	100	75.000	ENSOARG00000006243	-	98	82.899	Ovis_aries
ENSSFOG00015022118	prpf18	100	76.945	ENSPPAG00000041959	-	98	82.899	Pan_paniscus
ENSSFOG00015022118	prpf18	100	76.945	ENSPPRG00000000107	-	98	81.449	Panthera_pardus
ENSSFOG00015022118	prpf18	100	76.945	ENSPTIG00000021094	-	98	81.449	Panthera_tigris_altaica
ENSSFOG00015022118	prpf18	100	76.945	ENSPTRG00000002306	PRPF18	98	82.899	Pan_troglodytes
ENSSFOG00015022118	prpf18	100	76.945	ENSPANG00000023346	-	98	82.609	Papio_anubis
ENSSFOG00015022118	prpf18	100	78.652	ENSPKIG00000014128	prpf18	94	89.244	Paramormyrops_kingsleyae
ENSSFOG00015022118	prpf18	100	76.945	ENSPSIG00000016064	-	98	82.609	Pelodiscus_sinensis
ENSSFOG00015022118	prpf18	100	83.587	ENSPMGG00000016486	prpf18	100	83.587	Periophthalmus_magnuspinnatus
ENSSFOG00015022118	prpf18	100	76.945	ENSPEMG00000013704	Prpf18	98	81.449	Peromyscus_maniculatus_bairdii
ENSSFOG00015022118	prpf18	100	67.429	ENSPMAG00000000204	prpf18	98	72.174	Petromyzon_marinus
ENSSFOG00015022118	prpf18	92	75.389	ENSPCIG00000012963	-	99	82.769	Phascolarctos_cinereus
ENSSFOG00015022118	prpf18	100	77.871	ENSPFOG00000017611	prpf18	98	84.348	Poecilia_formosa
ENSSFOG00015022118	prpf18	100	79.251	ENSPLAG00000000369	prpf18	98	83.478	Poecilia_latipinna
ENSSFOG00015022118	prpf18	100	79.251	ENSPMEG00000005183	prpf18	98	84.638	Poecilia_mexicana
ENSSFOG00015022118	prpf18	100	79.251	ENSPREG00000015232	prpf18	98	84.058	Poecilia_reticulata
ENSSFOG00015022118	prpf18	100	76.657	ENSPPYG00000002101	PRPF18	98	81.159	Pongo_abelii
ENSSFOG00015022118	prpf18	100	59.654	ENSPCAG00000010833	-	98	63.768	Procavia_capensis
ENSSFOG00015022118	prpf18	100	72.911	ENSPCOG00000013057	-	98	77.616	Propithecus_coquereli
ENSSFOG00015022118	prpf18	100	50.144	ENSPVAG00000002947	-	100	50.144	Pteropus_vampyrus
ENSSFOG00015022118	prpf18	100	81.268	ENSPNYG00000003554	prpf18	98	86.377	Pundamilia_nyererei
ENSSFOG00015022118	prpf18	100	79.775	ENSPNAG00000023151	prpf18	98	87.536	Pygocentrus_nattereri
ENSSFOG00015022118	prpf18	100	76.657	ENSRNOG00000018396	Prpf18	98	81.449	Rattus_norvegicus
ENSSFOG00015022118	prpf18	100	82.407	ENSRBIG00000028028	-	100	82.407	Rhinopithecus_bieti
ENSSFOG00015022118	prpf18	100	77.233	ENSRROG00000040695	-	98	83.188	Rhinopithecus_roxellana
ENSSFOG00015022118	prpf18	100	77.233	ENSSBOG00000034482	-	98	83.188	Saimiri_boliviensis_boliviensis
ENSSFOG00015022118	prpf18	100	76.945	ENSSHAG00000016463	-	98	81.739	Sarcophilus_harrisii
ENSSFOG00015022118	prpf18	100	63.401	ENSSHAG00000009669	-	98	67.536	Sarcophilus_harrisii
ENSSFOG00015022118	prpf18	100	79.251	ENSSMAG00000005308	prpf18	98	84.058	Scophthalmus_maximus
ENSSFOG00015022118	prpf18	100	80.980	ENSSDUG00000015428	prpf18	98	86.087	Seriola_dumerili
ENSSFOG00015022118	prpf18	100	80.980	ENSSLDG00000023989	prpf18	98	86.087	Seriola_lalandi_dorsalis
ENSSFOG00015022118	prpf18	90	70.435	ENSSARG00000005307	-	83	70.435	Sorex_araneus
ENSSFOG00015022118	prpf18	100	82.286	ENSSPUG00000002619	-	98	82.609	Sphenodon_punctatus
ENSSFOG00015022118	prpf18	100	80.980	ENSSPAG00000019502	prpf18	98	86.087	Stegastes_partitus
ENSSFOG00015022118	prpf18	100	82.407	ENSSSCG00000026354	-	100	82.407	Sus_scrofa
ENSSFOG00015022118	prpf18	100	77.810	ENSTGUG00000002286	-	98	83.478	Taeniopygia_guttata
ENSSFOG00015022118	prpf18	100	78.674	ENSTRUG00000011278	prpf18	98	82.319	Takifugu_rubripes
ENSSFOG00015022118	prpf18	100	80.403	ENSTNIG00000000911	prpf18	98	84.058	Tetraodon_nigroviridis
ENSSFOG00015022118	prpf18	79	100.000	ENSTBEG00000013011	-	77	98.611	Tupaia_belangeri
ENSSFOG00015022118	prpf18	100	76.945	ENSTTRG00000011117	PRPF18	98	81.449	Tursiops_truncatus
ENSSFOG00015022118	prpf18	90	79.430	ENSUAMG00000001815	-	91	84.395	Ursus_americanus
ENSSFOG00015022118	prpf18	100	72.622	ENSUMAG00000012329	-	98	77.101	Ursus_maritimus
ENSSFOG00015022118	prpf18	100	71.676	ENSVPAG00000011486	-	98	76.232	Vicugna_pacos
ENSSFOG00015022118	prpf18	100	76.945	ENSVVUG00000005453	-	98	82.899	Vulpes_vulpes
ENSSFOG00015022118	prpf18	100	71.795	ENSXETG00000024057	prpf18	98	76.812	Xenopus_tropicalis
ENSSFOG00015022118	prpf18	100	78.510	ENSXCOG00000020414	prpf18	98	82.709	Xiphophorus_couchianus
ENSSFOG00015022118	prpf18	100	78.674	ENSXMAG00000004713	prpf18	89	84.058	Xiphophorus_maculatus