EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015022133 (Gene tree)
Gene ID: 108941183
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 18271 bases
Position: chrKV411217.1:6791614-6809884
Accession: 108941183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034755	Suf	PF05843.14	6.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015035135	-	5473	XM_018763816	ENSSFOP00015034755	716 (aa)	XP_018619332	A0A1W5AUW5

Gene Model

Click here to download ENSSFOG00015022133's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022133's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022133	cstf3	100	92.190	ENSG00000176102	CSTF3	100	92.190	Homo_sapiens
ENSSFOG00015022133	cstf3	100	94.003	ENSAPOG00000014054	cstf3	100	94.003	Acanthochromis_polyacanthus
ENSSFOG00015022133	cstf3	99	92.666	ENSAMEG00000007187	CSTF3	98	92.666	Ailuropoda_melanoleuca
ENSSFOG00015022133	cstf3	87	88.942	ENSACIG00000005539	cstf3	100	88.942	Amphilophus_citrinellus
ENSSFOG00015022133	cstf3	100	94.003	ENSAOCG00000010930	cstf3	100	94.003	Amphiprion_ocellaris
ENSSFOG00015022133	cstf3	100	94.003	ENSAPEG00000007903	cstf3	100	94.003	Amphiprion_percula
ENSSFOG00015022133	cstf3	100	94.421	ENSATEG00000000190	cstf3	100	94.421	Anabas_testudineus
ENSSFOG00015022133	cstf3	99	93.220	ENSAPLG00000007217	CSTF3	100	93.220	Anas_platyrhynchos
ENSSFOG00015022133	cstf3	100	92.479	ENSACAG00000002823	CSTF3	100	92.479	Anolis_carolinensis
ENSSFOG00015022133	cstf3	100	92.190	ENSANAG00000020699	CSTF3	100	92.190	Aotus_nancymaae
ENSSFOG00015022133	cstf3	98	94.602	ENSACLG00000007820	cstf3	100	94.003	Astatotilapia_calliptera
ENSSFOG00015022133	cstf3	100	92.329	ENSAMXG00000014198	cstf3	100	92.608	Astyanax_mexicanus
ENSSFOG00015022133	cstf3	100	92.190	ENSBTAG00000008617	CSTF3	100	92.582	Bos_taurus
ENSSFOG00015022133	cstf3	97	48.153	WBGene00006307	suf-1	99	48.153	Caenorhabditis_elegans
ENSSFOG00015022133	cstf3	100	92.190	ENSCJAG00000005533	CSTF3	100	92.190	Callithrix_jacchus
ENSSFOG00015022133	cstf3	100	92.190	ENSCAFG00000007264	CSTF3	100	92.190	Canis_familiaris
ENSSFOG00015022133	cstf3	99	92.807	ENSCAFG00020002715	CSTF3	99	92.807	Canis_lupus_dingo
ENSSFOG00015022133	cstf3	98	91.323	ENSCHIG00000016418	CSTF3	100	92.000	Capra_hircus
ENSSFOG00015022133	cstf3	99	92.948	ENSTSYG00000000451	CSTF3	99	96.681	Carlito_syrichta
ENSSFOG00015022133	cstf3	83	88.652	ENSCAPG00000010958	CSTF3	98	88.652	Cavia_aperea
ENSSFOG00015022133	cstf3	100	92.190	ENSCPOG00000005545	CSTF3	100	92.426	Cavia_porcellus
ENSSFOG00015022133	cstf3	100	92.190	ENSCCAG00000024790	CSTF3	96	96.889	Cebus_capucinus
ENSSFOG00015022133	cstf3	100	92.190	ENSCATG00000007080	CSTF3	100	92.190	Cercocebus_atys
ENSSFOG00015022133	cstf3	100	92.190	ENSCLAG00000016179	CSTF3	100	92.190	Chinchilla_lanigera
ENSSFOG00015022133	cstf3	78	98.496	ENSCHOG00000002497	CSTF3	79	98.496	Choloepus_hoffmanni
ENSSFOG00015022133	cstf3	100	93.315	ENSCPBG00000006753	CSTF3	100	93.315	Chrysemys_picta_bellii
ENSSFOG00015022133	cstf3	99	61.625	ENSCING00000006401	-	98	61.625	Ciona_intestinalis
ENSSFOG00015022133	cstf3	98	61.345	ENSCSAVG00000004851	-	100	61.345	Ciona_savignyi
ENSSFOG00015022133	cstf3	100	92.190	ENSCANG00000035468	CSTF3	100	92.190	Colobus_angolensis_palliatus
ENSSFOG00015022133	cstf3	100	91.911	ENSCGRG00001014773	Cstf3	100	91.911	Cricetulus_griseus_chok1gshd
ENSSFOG00015022133	cstf3	100	91.911	ENSCGRG00000004142	Cstf3	100	91.911	Cricetulus_griseus_crigri
ENSSFOG00015022133	cstf3	100	93.296	ENSCSEG00000014283	cstf3	100	93.296	Cynoglossus_semilaevis
ENSSFOG00015022133	cstf3	100	93.584	ENSCVAG00000019739	cstf3	100	93.584	Cyprinodon_variegatus
ENSSFOG00015022133	cstf3	100	94.413	ENSDARG00000018904	cstf3	100	94.413	Danio_rerio
ENSSFOG00015022133	cstf3	99	92.437	ENSDNOG00000007366	CSTF3	99	92.437	Dasypus_novemcinctus
ENSSFOG00015022133	cstf3	99	85.190	ENSDORG00000005898	Cstf3	99	85.190	Dipodomys_ordii
ENSSFOG00015022133	cstf3	98	57.441	FBgn0003559	su(f)	98	57.441	Drosophila_melanogaster
ENSSFOG00015022133	cstf3	90	86.916	ENSETEG00000017097	CSTF3	90	86.916	Echinops_telfairi
ENSSFOG00015022133	cstf3	84	73.798	ENSEBUG00000015459	cstf3	96	73.798	Eptatretus_burgeri
ENSSFOG00015022133	cstf3	98	93.000	ENSEASG00005019884	CSTF3	97	97.111	Equus_asinus_asinus
ENSSFOG00015022133	cstf3	98	93.000	ENSECAG00000023338	CSTF3	97	97.111	Equus_caballus
ENSSFOG00015022133	cstf3	100	86.890	ENSEEUG00000015167	CSTF3	100	86.890	Erinaceus_europaeus
ENSSFOG00015022133	cstf3	100	93.305	ENSELUG00000023393	cstf3	100	93.305	Esox_lucius
ENSSFOG00015022133	cstf3	100	92.190	ENSFCAG00000030711	CSTF3	100	92.190	Felis_catus
ENSSFOG00015022133	cstf3	93	94.144	ENSFALG00000010764	CSTF3	100	92.166	Ficedula_albicollis
ENSSFOG00015022133	cstf3	100	92.190	ENSFDAG00000012082	CSTF3	100	92.190	Fukomys_damarensis
ENSSFOG00015022133	cstf3	100	93.584	ENSFHEG00000020623	cstf3	100	93.584	Fundulus_heteroclitus
ENSSFOG00015022133	cstf3	100	92.201	ENSGMOG00000012275	cstf3	100	92.201	Gadus_morhua
ENSSFOG00015022133	cstf3	100	92.479	ENSGALG00000011685	CSTF3	100	92.479	Gallus_gallus
ENSSFOG00015022133	cstf3	100	93.863	ENSGAFG00000002181	cstf3	100	93.863	Gambusia_affinis
ENSSFOG00015022133	cstf3	100	93.584	ENSGACG00000015997	cstf3	100	93.584	Gasterosteus_aculeatus
ENSSFOG00015022133	cstf3	100	93.315	ENSGAGG00000006200	CSTF3	100	93.315	Gopherus_agassizii
ENSSFOG00015022133	cstf3	99	87.024	ENSGGOG00000026591	CSTF3	96	92.000	Gorilla_gorilla
ENSSFOG00015022133	cstf3	98	94.602	ENSHBUG00000016656	cstf3	100	94.003	Haplochromis_burtoni
ENSSFOG00015022133	cstf3	100	92.190	ENSHGLG00000017834	CSTF3	100	92.190	Heterocephalus_glaber_female
ENSSFOG00015022133	cstf3	100	92.190	ENSHGLG00100018042	CSTF3	100	92.190	Heterocephalus_glaber_male
ENSSFOG00015022133	cstf3	98	91.631	ENSHCOG00000015218	cstf3	100	90.934	Hippocampus_comes
ENSSFOG00015022133	cstf3	100	92.737	ENSIPUG00000013170	CSTF3	100	92.737	Ictalurus_punctatus
ENSSFOG00015022133	cstf3	100	92.190	ENSSTOG00000013306	CSTF3	100	92.190	Ictidomys_tridecemlineatus
ENSSFOG00015022133	cstf3	99	81.742	ENSJJAG00000018430	Cstf3	99	81.742	Jaculus_jaculus
ENSSFOG00015022133	cstf3	100	93.026	ENSKMAG00000010916	cstf3	100	93.026	Kryptolebias_marmoratus
ENSSFOG00015022133	cstf3	100	93.584	ENSLBEG00000002306	cstf3	100	93.584	Labrus_bergylta
ENSSFOG00015022133	cstf3	100	91.760	ENSLACG00000017296	CSTF3	100	91.760	Latimeria_chalumnae
ENSSFOG00015022133	cstf3	100	95.537	ENSLOCG00000004415	cstf3	100	95.537	Lepisosteus_oculatus
ENSSFOG00015022133	cstf3	100	92.190	ENSLAFG00000008712	CSTF3	100	92.190	Loxodonta_africana
ENSSFOG00015022133	cstf3	100	92.190	ENSMFAG00000029516	CSTF3	100	92.190	Macaca_fascicularis
ENSSFOG00015022133	cstf3	100	92.190	ENSMMUG00000002542	CSTF3	100	92.190	Macaca_mulatta
ENSSFOG00015022133	cstf3	100	92.190	ENSMNEG00000021807	CSTF3	100	92.190	Macaca_nemestrina
ENSSFOG00015022133	cstf3	100	92.190	ENSMLEG00000039594	CSTF3	100	92.190	Mandrillus_leucophaeus
ENSSFOG00015022133	cstf3	100	93.863	ENSMAMG00000020423	cstf3	100	93.863	Mastacembelus_armatus
ENSSFOG00015022133	cstf3	98	94.602	ENSMZEG00005012082	cstf3	100	94.003	Maylandia_zebra
ENSSFOG00015022133	cstf3	99	92.707	ENSMGAG00000001383	CSTF3	100	92.039	Meleagris_gallopavo
ENSSFOG00015022133	cstf3	100	91.771	ENSMAUG00000002487	Cstf3	100	91.771	Mesocricetus_auratus
ENSSFOG00015022133	cstf3	100	91.911	ENSMICG00000004784	CSTF3	100	91.911	Microcebus_murinus
ENSSFOG00015022133	cstf3	100	91.911	ENSMOCG00000017583	Cstf3	100	91.911	Microtus_ochrogaster
ENSSFOG00015022133	cstf3	99	94.201	ENSMMOG00000016026	cstf3	94	94.201	Mola_mola
ENSSFOG00015022133	cstf3	100	92.050	ENSMODG00000009745	-	100	92.050	Monodelphis_domestica
ENSSFOG00015022133	cstf3	100	81.311	ENSMODG00000025205	-	100	81.311	Monodelphis_domestica
ENSSFOG00015022133	cstf3	100	93.584	ENSMALG00000012050	cstf3	100	93.584	Monopterus_albus
ENSSFOG00015022133	cstf3	100	91.911	MGP_CAROLIEiJ_G0024026	Cstf3	100	91.911	Mus_caroli
ENSSFOG00015022133	cstf3	100	91.911	ENSMUSG00000027176	Cstf3	100	91.911	Mus_musculus
ENSSFOG00015022133	cstf3	100	91.911	MGP_PahariEiJ_G0025464	Cstf3	100	91.911	Mus_pahari
ENSSFOG00015022133	cstf3	100	91.911	MGP_SPRETEiJ_G0024939	Cstf3	100	91.911	Mus_spretus
ENSSFOG00015022133	cstf3	100	92.050	ENSMPUG00000011457	CSTF3	100	92.050	Mustela_putorius_furo
ENSSFOG00015022133	cstf3	99	92.546	ENSMLUG00000003073	-	99	92.546	Myotis_lucifugus
ENSSFOG00015022133	cstf3	100	89.400	ENSMLUG00000026022	-	100	89.400	Myotis_lucifugus
ENSSFOG00015022133	cstf3	100	92.190	ENSNGAG00000010677	Cstf3	100	92.190	Nannospalax_galili
ENSSFOG00015022133	cstf3	87	94.071	ENSNBRG00000007345	cstf3	100	94.071	Neolamprologus_brichardi
ENSSFOG00015022133	cstf3	100	92.190	ENSNLEG00000017901	CSTF3	100	92.190	Nomascus_leucogenys
ENSSFOG00015022133	cstf3	73	90.631	ENSMEUG00000005640	-	100	90.631	Notamacropus_eugenii
ENSSFOG00015022133	cstf3	67	90.667	ENSOPRG00000000199	-	67	90.667	Ochotona_princeps
ENSSFOG00015022133	cstf3	100	92.050	ENSODEG00000016737	-	100	92.050	Octodon_degus
ENSSFOG00015022133	cstf3	89	80.031	ENSODEG00000006311	-	97	80.031	Octodon_degus
ENSSFOG00015022133	cstf3	98	94.602	ENSONIG00000005563	cstf3	100	94.003	Oreochromis_niloticus
ENSSFOG00015022133	cstf3	90	91.846	ENSOANG00000015140	CSTF3	100	91.846	Ornithorhynchus_anatinus
ENSSFOG00015022133	cstf3	100	91.911	ENSOCUG00000015417	CSTF3	100	91.911	Oryctolagus_cuniculus
ENSSFOG00015022133	cstf3	100	93.156	ENSORLG00000009762	cstf3	100	93.156	Oryzias_latipes
ENSSFOG00015022133	cstf3	100	93.156	ENSORLG00020005540	cstf3	100	93.156	Oryzias_latipes_hni
ENSSFOG00015022133	cstf3	100	93.017	ENSORLG00015003551	cstf3	100	93.017	Oryzias_latipes_hsok
ENSSFOG00015022133	cstf3	100	92.458	ENSOMEG00000003848	cstf3	100	92.458	Oryzias_melastigma
ENSSFOG00015022133	cstf3	100	91.667	ENSOGAG00000010229	CSTF3	100	91.667	Otolemur_garnettii
ENSSFOG00015022133	cstf3	90	92.068	ENSOARG00000017271	CSTF3	99	92.068	Ovis_aries
ENSSFOG00015022133	cstf3	99	89.422	ENSPPAG00000027358	CSTF3	99	89.422	Pan_paniscus
ENSSFOG00015022133	cstf3	100	92.190	ENSPPRG00000016852	CSTF3	100	92.190	Panthera_pardus
ENSSFOG00015022133	cstf3	100	92.190	ENSPTIG00000008716	CSTF3	100	92.190	Panthera_tigris_altaica
ENSSFOG00015022133	cstf3	100	92.190	ENSPTRG00000003485	CSTF3	100	92.190	Pan_troglodytes
ENSSFOG00015022133	cstf3	100	92.190	ENSPANG00000013722	CSTF3	100	92.190	Papio_anubis
ENSSFOG00015022133	cstf3	100	97.067	ENSPKIG00000023648	cstf3	100	97.067	Paramormyrops_kingsleyae
ENSSFOG00015022133	cstf3	100	93.175	ENSPSIG00000009173	CSTF3	100	93.175	Pelodiscus_sinensis
ENSSFOG00015022133	cstf3	76	96.161	ENSPMGG00000000164	cstf3	99	96.161	Periophthalmus_magnuspinnatus
ENSSFOG00015022133	cstf3	100	91.911	ENSPEMG00000011481	Cstf3	100	91.911	Peromyscus_maniculatus_bairdii
ENSSFOG00015022133	cstf3	99	79.354	ENSPMAG00000007282	cstf3	99	79.494	Petromyzon_marinus
ENSSFOG00015022133	cstf3	99	90.409	ENSPCIG00000026406	-	100	91.840	Phascolarctos_cinereus
ENSSFOG00015022133	cstf3	100	77.437	ENSPCIG00000030419	-	90	77.716	Phascolarctos_cinereus
ENSSFOG00015022133	cstf3	100	94.003	ENSPFOG00000017239	cstf3	100	94.003	Poecilia_formosa
ENSSFOG00015022133	cstf3	100	94.142	ENSPLAG00000009456	cstf3	100	94.142	Poecilia_latipinna
ENSSFOG00015022133	cstf3	100	94.003	ENSPMEG00000010320	cstf3	100	94.003	Poecilia_mexicana
ENSSFOG00015022133	cstf3	100	94.003	ENSPREG00000013549	cstf3	100	94.003	Poecilia_reticulata
ENSSFOG00015022133	cstf3	100	92.190	ENSPPYG00000003375	CSTF3	100	92.190	Pongo_abelii
ENSSFOG00015022133	cstf3	71	95.470	ENSPCAG00000008025	-	71	95.470	Procavia_capensis
ENSSFOG00015022133	cstf3	100	86.890	ENSPCOG00000014417	CSTF3	100	86.890	Propithecus_coquereli
ENSSFOG00015022133	cstf3	100	86.890	ENSPVAG00000002350	CSTF3	100	86.890	Pteropus_vampyrus
ENSSFOG00015022133	cstf3	98	94.602	ENSPNYG00000018259	cstf3	100	94.003	Pundamilia_nyererei
ENSSFOG00015022133	cstf3	100	94.274	ENSPNAG00000020182	cstf3	100	94.274	Pygocentrus_nattereri
ENSSFOG00015022133	cstf3	87	91.520	ENSRNOG00000012089	Cstf3	100	91.520	Rattus_norvegicus
ENSSFOG00015022133	cstf3	99	91.396	ENSRBIG00000044258	CSTF3	100	92.000	Rhinopithecus_bieti
ENSSFOG00015022133	cstf3	100	92.190	ENSRROG00000043450	CSTF3	100	92.190	Rhinopithecus_roxellana
ENSSFOG00015022133	cstf3	100	92.190	ENSSBOG00000024764	CSTF3	98	96.889	Saimiri_boliviensis_boliviensis
ENSSFOG00015022133	cstf3	100	83.124	ENSSHAG00000003135	-	99	83.124	Sarcophilus_harrisii
ENSSFOG00015022133	cstf3	100	91.492	ENSSHAG00000018128	-	100	91.492	Sarcophilus_harrisii
ENSSFOG00015022133	cstf3	100	93.584	ENSSMAG00000002197	cstf3	100	93.584	Scophthalmus_maximus
ENSSFOG00015022133	cstf3	100	94.282	ENSSDUG00000020426	cstf3	100	94.282	Seriola_dumerili
ENSSFOG00015022133	cstf3	100	94.282	ENSSLDG00000025649	cstf3	100	94.282	Seriola_lalandi_dorsalis
ENSSFOG00015022133	cstf3	100	91.771	ENSSARG00000000391	CSTF3	100	91.771	Sorex_araneus
ENSSFOG00015022133	cstf3	96	92.764	ENSSPUG00000010546	CSTF3	100	92.764	Sphenodon_punctatus
ENSSFOG00015022133	cstf3	100	93.863	ENSSPAG00000004958	cstf3	100	93.863	Stegastes_partitus
ENSSFOG00015022133	cstf3	99	91.899	ENSSSCG00000040954	CSTF3	100	91.899	Sus_scrofa
ENSSFOG00015022133	cstf3	99	93.220	ENSTGUG00000005010	CSTF3	100	93.220	Taeniopygia_guttata
ENSSFOG00015022133	cstf3	100	92.887	ENSTRUG00000004959	cstf3	100	92.887	Takifugu_rubripes
ENSSFOG00015022133	cstf3	99	93.494	ENSTNIG00000013811	cstf3	98	93.494	Tetraodon_nigroviridis
ENSSFOG00015022133	cstf3	90	89.564	ENSTBEG00000001544	CSTF3	90	89.564	Tupaia_belangeri
ENSSFOG00015022133	cstf3	100	89.121	ENSTTRG00000016366	CSTF3	100	89.121	Tursiops_truncatus
ENSSFOG00015022133	cstf3	99	92.525	ENSUMAG00000018971	CSTF3	100	91.680	Ursus_maritimus
ENSSFOG00015022133	cstf3	100	92.050	ENSVPAG00000007800	CSTF3	100	92.050	Vicugna_pacos
ENSSFOG00015022133	cstf3	99	92.807	ENSVVUG00000014938	CSTF3	100	92.000	Vulpes_vulpes
ENSSFOG00015022133	cstf3	66	42.236	ENSXETG00000017946	-	99	42.236	Xenopus_tropicalis
ENSSFOG00015022133	cstf3	88	75.781	ENSXETG00000021399	cstf3	100	76.613	Xenopus_tropicalis
ENSSFOG00015022133	cstf3	87	93.590	ENSXCOG00000011741	cstf3	100	93.590	Xiphophorus_couchianus
ENSSFOG00015022133	cstf3	100	93.863	ENSXMAG00000009545	cstf3	100	93.863	Xiphophorus_maculatus