EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015022259 (Gene tree)
Gene ID: 108934446
Gene Symbol: rbm22 (1 of many)
Alias: fb37a01|fc62e03|fe05c04|wu:fb37a01|wu:fc62e03|wu:fe05c04|zgc:77910
Full Name: pre-mRNA-splicing factor RBM22-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7793 bases
Position: chrKV411071.1:3353007-3360799
Accession: 108934446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015035004	RRM_1	PF00076.22	4.9e-09	1	1
ENSSFOP00015034968	RRM_1	PF00076.22	5.4e-09	1	1
ENSSFOP00015034981	RRM_1	PF00076.22	5.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015035364	-	1394	-	ENSSFOP00015034981	423 (aa)	-	A0A1W4ZVX9
ENSSFOT00015035387	-	1197	-	ENSSFOP00015035004	398 (aa)	-	-
ENSSFOT00015035351	-	1399	XM_018752293	ENSSFOP00015034968	423 (aa)	XP_018607809	A0A1W4ZVX9

Gene Model

Click here to download ENSSFOG00015022259's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015022259	rbm22	100	89.486	ENSSFOG00015014955	rbm22	100	89.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022259	rbm22	99	85.071	ENSG00000086589	RBM22	100	89.785	Homo_sapiens
ENSSFOG00015022259	rbm22	99	84.471	ENSAPOG00000010338	rbm22	99	84.579	Acanthochromis_polyacanthus
ENSSFOG00015022259	rbm22	99	85.071	ENSAMEG00000004544	RBM22	99	84.834	Ailuropoda_melanoleuca
ENSSFOG00015022259	rbm22	99	77.778	ENSACIG00000016372	rbm22	99	77.857	Amphilophus_citrinellus
ENSSFOG00015022259	rbm22	99	84.471	ENSAOCG00000007179	rbm22	99	84.579	Amphiprion_ocellaris
ENSSFOG00015022259	rbm22	99	84.471	ENSAPEG00000016689	rbm22	99	84.579	Amphiprion_percula
ENSSFOG00015022259	rbm22	99	85.047	ENSATEG00000008286	rbm22	99	84.706	Anabas_testudineus
ENSSFOG00015022259	rbm22	98	81.775	ENSAPLG00000016408	RBM22	98	81.775	Anas_platyrhynchos
ENSSFOG00015022259	rbm22	99	82.547	ENSACAG00000014750	RBM22	99	84.198	Anolis_carolinensis
ENSSFOG00015022259	rbm22	94	79.101	ENSANAG00000019688	-	99	79.101	Aotus_nancymaae
ENSSFOG00015022259	rbm22	99	85.071	ENSANAG00000033743	-	99	84.597	Aotus_nancymaae
ENSSFOG00015022259	rbm22	99	85.106	ENSACLG00000008863	rbm22	98	84.762	Astatotilapia_calliptera
ENSSFOG00015022259	rbm22	100	84.038	ENSAMXG00000038080	rbm22	100	79.024	Astyanax_mexicanus
ENSSFOG00015022259	rbm22	99	84.397	ENSAMXG00000018529	-	99	84.397	Astyanax_mexicanus
ENSSFOG00015022259	rbm22	99	85.071	ENSBTAG00000030366	RBM22	99	84.834	Bos_taurus
ENSSFOG00015022259	rbm22	96	53.398	WBGene00011722	rbm-22	96	48.411	Caenorhabditis_elegans
ENSSFOG00015022259	rbm22	99	85.071	ENSCJAG00000020963	RBM22	99	84.597	Callithrix_jacchus
ENSSFOG00015022259	rbm22	86	85.753	ENSCJAG00000013247	-	85	86.226	Callithrix_jacchus
ENSSFOG00015022259	rbm22	99	84.670	ENSCAFG00000018082	RBM22	99	84.434	Canis_familiaris
ENSSFOG00015022259	rbm22	99	85.071	ENSCAFG00020023671	RBM22	99	84.834	Canis_lupus_dingo
ENSSFOG00015022259	rbm22	99	85.071	ENSCHIG00000015561	RBM22	99	84.834	Capra_hircus
ENSSFOG00015022259	rbm22	99	85.071	ENSTSYG00000003939	-	99	84.834	Carlito_syrichta
ENSSFOG00015022259	rbm22	91	71.505	ENSTSYG00000037586	-	99	72.312	Carlito_syrichta
ENSSFOG00015022259	rbm22	95	80.311	ENSCAPG00000002598	RBM22	95	82.051	Cavia_aperea
ENSSFOG00015022259	rbm22	99	85.071	ENSCPOG00000001946	RBM22	99	84.834	Cavia_porcellus
ENSSFOG00015022259	rbm22	99	85.071	ENSCCAG00000033546	RBM22	99	84.597	Cebus_capucinus
ENSSFOG00015022259	rbm22	99	85.071	ENSCATG00000042133	RBM22	99	84.834	Cercocebus_atys
ENSSFOG00015022259	rbm22	99	85.071	ENSCLAG00000010842	-	99	84.834	Chinchilla_lanigera
ENSSFOG00015022259	rbm22	99	63.208	ENSCLAG00000014221	-	93	64.455	Chinchilla_lanigera
ENSSFOG00015022259	rbm22	99	69.668	ENSCLAG00000007106	-	99	68.396	Chinchilla_lanigera
ENSSFOG00015022259	rbm22	93	85.642	ENSCSAG00000019006	-	92	88.430	Chlorocebus_sabaeus
ENSSFOG00015022259	rbm22	99	84.123	ENSCHOG00000013522	-	99	83.886	Choloepus_hoffmanni
ENSSFOG00015022259	rbm22	74	89.153	ENSCHOG00000004192	-	99	89.153	Choloepus_hoffmanni
ENSSFOG00015022259	rbm22	99	84.597	ENSCHOG00000001041	-	99	84.360	Choloepus_hoffmanni
ENSSFOG00015022259	rbm22	99	84.634	ENSCPBG00000010094	RBM22	99	84.397	Chrysemys_picta_bellii
ENSSFOG00015022259	rbm22	98	62.619	ENSCING00000005843	zf(c3h)-12	99	57.482	Ciona_intestinalis
ENSSFOG00015022259	rbm22	98	63.333	ENSCSAVG00000009145	-	99	63.571	Ciona_savignyi
ENSSFOG00015022259	rbm22	99	85.071	ENSCANG00000025232	RBM22	99	84.834	Colobus_angolensis_palliatus
ENSSFOG00015022259	rbm22	99	85.071	ENSCGRG00001015110	Rbm22	99	84.834	Cricetulus_griseus_chok1gshd
ENSSFOG00015022259	rbm22	99	81.146	ENSCGRG00000011751	Rbm22	99	80.668	Cricetulus_griseus_crigri
ENSSFOG00015022259	rbm22	99	83.810	ENSCSEG00000010790	rbm22	98	82.270	Cynoglossus_semilaevis
ENSSFOG00015022259	rbm22	99	82.979	ENSCVAG00000010670	rbm22	98	81.560	Cyprinodon_variegatus
ENSSFOG00015022259	rbm22	99	83.491	ENSDARG00000010238	rbm22	99	84.038	Danio_rerio
ENSSFOG00015022259	rbm22	99	85.071	ENSDNOG00000011166	RBM22	99	84.834	Dasypus_novemcinctus
ENSSFOG00015022259	rbm22	99	65.640	ENSDORG00000005329	Rbm22	99	65.166	Dipodomys_ordii
ENSSFOG00015022259	rbm22	98	59.070	FBgn0037220	CG14641	99	57.009	Drosophila_melanogaster
ENSSFOG00015022259	rbm22	91	89.362	ENSEBUG00000016742	-	99	89.362	Eptatretus_burgeri
ENSSFOG00015022259	rbm22	99	85.071	ENSEASG00005002681	RBM22	99	84.834	Equus_asinus_asinus
ENSSFOG00015022259	rbm22	99	77.586	ENSECAG00000014940	RBM22	78	88.430	Equus_caballus
ENSSFOG00015022259	rbm22	99	68.794	ENSEEUG00000009778	-	99	68.322	Erinaceus_europaeus
ENSSFOG00015022259	rbm22	99	83.412	ENSEEUG00000005638	-	99	83.412	Erinaceus_europaeus
ENSSFOG00015022259	rbm22	99	86.085	ENSELUG00000001106	rbm22	96	86.085	Esox_lucius
ENSSFOG00015022259	rbm22	99	85.071	ENSFCAG00000018845	RBM22	99	84.834	Felis_catus
ENSSFOG00015022259	rbm22	99	84.597	ENSFALG00000008051	RBM22	99	84.360	Ficedula_albicollis
ENSSFOG00015022259	rbm22	99	85.071	ENSFDAG00000020067	RBM22	99	84.834	Fukomys_damarensis
ENSSFOG00015022259	rbm22	99	83.810	ENSFHEG00000014032	rbm22	98	83.810	Fundulus_heteroclitus
ENSSFOG00015022259	rbm22	99	84.597	ENSGMOG00000010186	rbm22	100	83.649	Gadus_morhua
ENSSFOG00015022259	rbm22	99	84.597	ENSGALG00000004555	RBM22	99	84.360	Gallus_gallus
ENSSFOG00015022259	rbm22	99	83.765	ENSGAFG00000008621	rbm22	99	83.765	Gambusia_affinis
ENSSFOG00015022259	rbm22	99	84.870	ENSGACG00000018027	rbm22	99	83.215	Gasterosteus_aculeatus
ENSSFOG00015022259	rbm22	99	84.634	ENSGAGG00000024305	RBM22	99	84.397	Gopherus_agassizii
ENSSFOG00015022259	rbm22	99	85.071	ENSGGOG00000012947	RBM22	99	84.834	Gorilla_gorilla
ENSSFOG00015022259	rbm22	99	85.106	ENSHBUG00000002941	rbm22	98	84.762	Haplochromis_burtoni
ENSSFOG00015022259	rbm22	99	85.071	ENSHGLG00000008488	RBM22	99	84.834	Heterocephalus_glaber_female
ENSSFOG00015022259	rbm22	97	84.783	ENSHGLG00100006872	RBM22	98	84.541	Heterocephalus_glaber_male
ENSSFOG00015022259	rbm22	85	85.596	ENSHCOG00000016334	rbm22	92	85.596	Hippocampus_comes
ENSSFOG00015022259	rbm22	100	84.038	ENSIPUG00000019751	rbm22	100	84.507	Ictalurus_punctatus
ENSSFOG00015022259	rbm22	99	71.564	ENSSTOG00000027197	RBM22	99	68.246	Ictidomys_tridecemlineatus
ENSSFOG00015022259	rbm22	99	70.853	ENSSTOG00000029346	-	97	72.749	Ictidomys_tridecemlineatus
ENSSFOG00015022259	rbm22	99	85.071	ENSJJAG00000009565	Rbm22	99	84.834	Jaculus_jaculus
ENSSFOG00015022259	rbm22	99	83.765	ENSKMAG00000004354	rbm22	99	83.765	Kryptolebias_marmoratus
ENSSFOG00015022259	rbm22	99	84.964	ENSLBEG00000027750	rbm22	88	84.834	Labrus_bergylta
ENSSFOG00015022259	rbm22	100	88.785	ENSLOCG00000010989	rbm22	100	88.318	Lepisosteus_oculatus
ENSSFOG00015022259	rbm22	99	85.071	ENSLAFG00000006638	RBM22	99	84.834	Loxodonta_africana
ENSSFOG00015022259	rbm22	99	85.071	ENSMFAG00000004034	RBM22	99	84.834	Macaca_fascicularis
ENSSFOG00015022259	rbm22	99	85.071	ENSMMUG00000020683	RBM22	99	84.834	Macaca_mulatta
ENSSFOG00015022259	rbm22	99	85.071	ENSMNEG00000035500	RBM22	99	84.834	Macaca_nemestrina
ENSSFOG00015022259	rbm22	99	85.071	ENSMLEG00000034825	RBM22	99	84.834	Mandrillus_leucophaeus
ENSSFOG00015022259	rbm22	99	84.706	ENSMAMG00000007370	rbm22	99	84.706	Mastacembelus_armatus
ENSSFOG00015022259	rbm22	99	85.106	ENSMZEG00005013001	rbm22	98	84.762	Maylandia_zebra
ENSSFOG00015022259	rbm22	99	84.597	ENSMGAG00000006298	RBM22	99	84.360	Meleagris_gallopavo
ENSSFOG00015022259	rbm22	99	85.071	ENSMAUG00000001133	Rbm22	99	84.834	Mesocricetus_auratus
ENSSFOG00015022259	rbm22	99	85.071	ENSMICG00000033712	RBM22	99	84.834	Microcebus_murinus
ENSSFOG00015022259	rbm22	99	78.910	ENSMOCG00000018311	Rbm22	99	78.673	Microtus_ochrogaster
ENSSFOG00015022259	rbm22	99	85.000	ENSMMOG00000003192	rbm22	98	85.000	Mola_mola
ENSSFOG00015022259	rbm22	99	84.123	ENSMODG00000009574	-	99	83.886	Monodelphis_domestica
ENSSFOG00015022259	rbm22	100	78.220	ENSMODG00000006398	-	100	78.220	Monodelphis_domestica
ENSSFOG00015022259	rbm22	99	84.471	ENSMALG00000013964	rbm22	99	84.471	Monopterus_albus
ENSSFOG00015022259	rbm22	99	85.071	MGP_CAROLIEiJ_G0022307	Rbm22	99	84.834	Mus_caroli
ENSSFOG00015022259	rbm22	99	85.071	ENSMUSG00000024604	Rbm22	99	84.834	Mus_musculus
ENSSFOG00015022259	rbm22	99	85.071	MGP_PahariEiJ_G0019037	Rbm22	99	84.834	Mus_pahari
ENSSFOG00015022259	rbm22	99	85.071	MGP_SPRETEiJ_G0023219	Rbm22	99	84.834	Mus_spretus
ENSSFOG00015022259	rbm22	99	85.071	ENSMPUG00000013760	RBM22	99	84.834	Mustela_putorius_furo
ENSSFOG00015022259	rbm22	99	85.071	ENSMLUG00000009040	RBM22	99	84.834	Myotis_lucifugus
ENSSFOG00015022259	rbm22	99	84.123	ENSMLUG00000003461	-	99	82.938	Myotis_lucifugus
ENSSFOG00015022259	rbm22	99	85.071	ENSNGAG00000018233	Rbm22	99	84.834	Nannospalax_galili
ENSSFOG00015022259	rbm22	92	80.159	ENSNBRG00000010458	rbm22	95	85.217	Neolamprologus_brichardi
ENSSFOG00015022259	rbm22	99	85.071	ENSNLEG00000010397	-	99	84.834	Nomascus_leucogenys
ENSSFOG00015022259	rbm22	82	72.607	ENSMEUG00000001573	-	72	72.607	Notamacropus_eugenii
ENSSFOG00015022259	rbm22	99	75.059	ENSMEUG00000009348	-	99	75.059	Notamacropus_eugenii
ENSSFOG00015022259	rbm22	99	66.825	ENSOPRG00000016612	-	99	66.351	Ochotona_princeps
ENSSFOG00015022259	rbm22	99	85.308	ENSOPRG00000008481	-	99	85.071	Ochotona_princeps
ENSSFOG00015022259	rbm22	99	84.360	ENSODEG00000005016	RBM22	99	84.123	Octodon_degus
ENSSFOG00015022259	rbm22	99	84.906	ENSONIG00000013049	rbm22	99	83.610	Oreochromis_niloticus
ENSSFOG00015022259	rbm22	99	82.629	ENSOANG00000002314	RBM22	99	83.099	Ornithorhynchus_anatinus
ENSSFOG00015022259	rbm22	99	85.071	ENSOCUG00000011532	RBM22	99	84.834	Oryctolagus_cuniculus
ENSSFOG00015022259	rbm22	99	82.629	ENSORLG00000004975	rbm22	99	82.270	Oryzias_latipes
ENSSFOG00015022259	rbm22	99	82.629	ENSORLG00020012969	rbm22	99	82.270	Oryzias_latipes_hni
ENSSFOG00015022259	rbm22	99	82.629	ENSORLG00015022508	rbm22	99	82.270	Oryzias_latipes_hsok
ENSSFOG00015022259	rbm22	99	82.394	ENSOMEG00000004904	rbm22	99	81.797	Oryzias_melastigma
ENSSFOG00015022259	rbm22	99	81.560	ENSOGAG00000011086	RBM22	99	81.324	Otolemur_garnettii
ENSSFOG00015022259	rbm22	99	84.198	ENSOARG00000007633	RBM22	99	83.491	Ovis_aries
ENSSFOG00015022259	rbm22	99	85.071	ENSPPAG00000034432	RBM22	99	84.834	Pan_paniscus
ENSSFOG00015022259	rbm22	99	85.071	ENSPPRG00000011577	RBM22	99	84.834	Panthera_pardus
ENSSFOG00015022259	rbm22	99	85.071	ENSPTIG00000004453	RBM22	99	84.834	Panthera_tigris_altaica
ENSSFOG00015022259	rbm22	99	85.071	ENSPTRG00000017423	RBM22	99	84.834	Pan_troglodytes
ENSSFOG00015022259	rbm22	99	85.071	ENSPANG00000011297	RBM22	99	84.834	Papio_anubis
ENSSFOG00015022259	rbm22	85	86.704	ENSPKIG00000019326	rbm22	83	86.427	Paramormyrops_kingsleyae
ENSSFOG00015022259	rbm22	100	88.785	ENSPKIG00000010315	rbm22	100	88.318	Paramormyrops_kingsleyae
ENSSFOG00015022259	rbm22	99	84.870	ENSPSIG00000012818	RBM22	99	84.634	Pelodiscus_sinensis
ENSSFOG00015022259	rbm22	99	82.014	ENSPMGG00000017638	rbm22	100	81.905	Periophthalmus_magnuspinnatus
ENSSFOG00015022259	rbm22	99	85.071	ENSPEMG00000001753	Rbm22	99	84.834	Peromyscus_maniculatus_bairdii
ENSSFOG00015022259	rbm22	80	66.176	ENSPMAG00000007317	-	98	66.181	Petromyzon_marinus
ENSSFOG00015022259	rbm22	99	72.512	ENSPCIG00000015088	RBM22	99	72.275	Phascolarctos_cinereus
ENSSFOG00015022259	rbm22	99	84.543	ENSPFOG00000005625	rbm22	99	83.962	Poecilia_formosa
ENSSFOG00015022259	rbm22	99	84.543	ENSPLAG00000006344	rbm22	99	83.962	Poecilia_latipinna
ENSSFOG00015022259	rbm22	99	80.542	ENSPMEG00000007992	rbm22	99	82.776	Poecilia_mexicana
ENSSFOG00015022259	rbm22	99	83.726	ENSPREG00000003546	rbm22	99	83.726	Poecilia_reticulata
ENSSFOG00015022259	rbm22	99	85.071	ENSPPYG00000015955	RBM22	99	84.834	Pongo_abelii
ENSSFOG00015022259	rbm22	86	73.151	ENSPCAG00000015091	RBM22	96	73.554	Procavia_capensis
ENSSFOG00015022259	rbm22	99	85.071	ENSPVAG00000014231	RBM22	99	84.834	Pteropus_vampyrus
ENSSFOG00015022259	rbm22	85	84.150	ENSPNYG00000000380	rbm22	95	85.507	Pundamilia_nyererei
ENSSFOG00015022259	rbm22	99	86.761	ENSPNAG00000010001	-	99	86.998	Pygocentrus_nattereri
ENSSFOG00015022259	rbm22	99	86.118	ENSPNAG00000002687	rbm22	99	84.706	Pygocentrus_nattereri
ENSSFOG00015022259	rbm22	99	85.071	ENSRNOG00000019235	Rbm22	99	84.834	Rattus_norvegicus
ENSSFOG00015022259	rbm22	99	85.071	ENSRBIG00000041683	RBM22	99	84.834	Rhinopithecus_bieti
ENSSFOG00015022259	rbm22	99	85.071	ENSRROG00000041637	RBM22	99	84.834	Rhinopithecus_roxellana
ENSSFOG00015022259	rbm22	99	84.834	ENSSBOG00000035400	-	99	84.360	Saimiri_boliviensis_boliviensis
ENSSFOG00015022259	rbm22	99	83.886	ENSSHAG00000017734	-	99	83.649	Sarcophilus_harrisii
ENSSFOG00015022259	rbm22	99	85.748	ENSSMAG00000002921	rbm22	99	85.412	Scophthalmus_maximus
ENSSFOG00015022259	rbm22	99	85.412	ENSSDUG00000003846	rbm22	99	85.412	Seriola_dumerili
ENSSFOG00015022259	rbm22	99	85.412	ENSSLDG00000003804	rbm22	99	85.412	Seriola_lalandi_dorsalis
ENSSFOG00015022259	rbm22	99	82.311	ENSSPUG00000003986	RBM22	99	83.962	Sphenodon_punctatus
ENSSFOG00015022259	rbm22	99	84.706	ENSSPAG00000000383	rbm22	99	84.813	Stegastes_partitus
ENSSFOG00015022259	rbm22	99	84.834	ENSSSCG00000023231	RBM22	99	84.597	Sus_scrofa
ENSSFOG00015022259	rbm22	99	84.597	ENSTGUG00000000850	RBM22	99	84.360	Taeniopygia_guttata
ENSSFOG00015022259	rbm22	99	84.309	ENSTRUG00000004724	rbm22	99	83.607	Takifugu_rubripes
ENSSFOG00015022259	rbm22	99	72.512	ENSTBEG00000005617	RBM22	99	72.275	Tupaia_belangeri
ENSSFOG00015022259	rbm22	99	85.071	ENSTTRG00000012778	RBM22	99	84.834	Tursiops_truncatus
ENSSFOG00015022259	rbm22	99	85.071	ENSUAMG00000025133	RBM22	99	84.834	Ursus_americanus
ENSSFOG00015022259	rbm22	99	85.071	ENSUMAG00000003651	RBM22	99	84.834	Ursus_maritimus
ENSSFOG00015022259	rbm22	99	85.071	ENSVVUG00000007193	RBM22	99	84.834	Vulpes_vulpes
ENSSFOG00015022259	rbm22	99	80.285	ENSXETG00000020435	rbm22	99	80.048	Xenopus_tropicalis
ENSSFOG00015022259	rbm22	99	79.762	ENSXCOG00000003316	rbm22	100	78.554	Xiphophorus_couchianus
ENSSFOG00015022259	rbm22	99	84.048	ENSXMAG00000008681	rbm22	98	84.048	Xiphophorus_maculatus