EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015022383 (Gene tree)
Gene ID: 108934472
Gene Symbol: cnot6a
Alias: cnot6|wu:fa03c11|wu:fc17f01|zgc:65822
Full Name: CCR4-NOT transcription complex subunit 6-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 12663 bases
Position: chrKV411071.1:3450285-3462947
Accession: 108934472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015035161	Exo_endo_phos	PF03372.23	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015035545	-	6531	XM_018752343	ENSSFOP00015035161	582 (aa)	XP_018607859	-

Gene Model

Click here to download ENSSFOG00015022383's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015022383	cnot6a	96	91.756	ENSSFOG00015015133	CNOT6	100	91.756
ENSSFOG00015022383	cnot6a	96	73.656	ENSSFOG00015019044	cnot6l	100	73.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022383	cnot6a	96	85.663	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSSFOG00015022383	cnot6a	96	91.413	ENSAPOG00000009994	cnot6b	100	91.413	Acanthochromis_polyacanthus
ENSSFOG00015022383	cnot6a	96	86.071	ENSAMEG00000000949	CNOT6	99	86.071	Ailuropoda_melanoleuca
ENSSFOG00015022383	cnot6a	96	89.803	ENSACIG00000016566	cnot6b	100	89.803	Amphilophus_citrinellus
ENSSFOG00015022383	cnot6a	96	91.413	ENSAOCG00000006893	cnot6b	100	91.413	Amphiprion_ocellaris
ENSSFOG00015022383	cnot6a	96	91.413	ENSAPEG00000016949	cnot6b	100	91.413	Amphiprion_percula
ENSSFOG00015022383	cnot6a	96	89.267	ENSATEG00000007862	cnot6b	100	89.267	Anabas_testudineus
ENSSFOG00015022383	cnot6a	96	87.455	ENSAPLG00000012715	CNOT6	99	87.455	Anas_platyrhynchos
ENSSFOG00015022383	cnot6a	96	86.918	ENSACAG00000016548	CNOT6	100	86.918	Anolis_carolinensis
ENSSFOG00015022383	cnot6a	96	85.842	ENSANAG00000030436	CNOT6	96	85.842	Aotus_nancymaae
ENSSFOG00015022383	cnot6a	96	89.267	ENSACLG00000008279	cnot6b	100	90.161	Astatotilapia_calliptera
ENSSFOG00015022383	cnot6a	96	88.710	ENSAMXG00000034694	cnot6b	100	88.710	Astyanax_mexicanus
ENSSFOG00015022383	cnot6a	96	92.294	ENSAMXG00000019140	cnot6a	100	92.294	Astyanax_mexicanus
ENSSFOG00015022383	cnot6a	96	86.201	ENSBTAG00000017362	CNOT6	100	86.201	Bos_taurus
ENSSFOG00015022383	cnot6a	96	86.022	ENSCJAG00000009795	CNOT6	100	86.022	Callithrix_jacchus
ENSSFOG00015022383	cnot6a	96	86.380	ENSCAFG00000000464	CNOT6	100	86.380	Canis_familiaris
ENSSFOG00015022383	cnot6a	96	86.380	ENSCAFG00020002441	CNOT6	100	86.380	Canis_lupus_dingo
ENSSFOG00015022383	cnot6a	96	86.022	ENSCHIG00000019100	CNOT6	100	86.022	Capra_hircus
ENSSFOG00015022383	cnot6a	96	85.125	ENSTSYG00000003982	CNOT6	100	85.125	Carlito_syrichta
ENSSFOG00015022383	cnot6a	96	81.541	ENSCPOG00000035657	CNOT6	100	81.541	Cavia_porcellus
ENSSFOG00015022383	cnot6a	96	81.720	ENSCCAG00000033670	CNOT6	100	81.720	Cebus_capucinus
ENSSFOG00015022383	cnot6a	96	85.663	ENSCATG00000042014	CNOT6	100	85.663	Cercocebus_atys
ENSSFOG00015022383	cnot6a	96	84.946	ENSCLAG00000010489	CNOT6	100	84.946	Chinchilla_lanigera
ENSSFOG00015022383	cnot6a	96	85.663	ENSCSAG00000008165	CNOT6	100	85.663	Chlorocebus_sabaeus
ENSSFOG00015022383	cnot6a	96	85.842	ENSCHOG00000009680	CNOT6	100	85.842	Choloepus_hoffmanni
ENSSFOG00015022383	cnot6a	96	87.634	ENSCPBG00000008908	CNOT6	100	87.634	Chrysemys_picta_bellii
ENSSFOG00015022383	cnot6a	96	85.842	ENSCANG00000026756	CNOT6	100	85.842	Colobus_angolensis_palliatus
ENSSFOG00015022383	cnot6a	96	84.409	ENSCGRG00001011452	Cnot6	100	84.409	Cricetulus_griseus_chok1gshd
ENSSFOG00015022383	cnot6a	96	82.616	ENSCGRG00000010407	Cnot6	100	82.616	Cricetulus_griseus_crigri
ENSSFOG00015022383	cnot6a	96	90.698	ENSCSEG00000010939	cnot6b	100	90.698	Cynoglossus_semilaevis
ENSSFOG00015022383	cnot6a	96	89.624	ENSCVAG00000010538	cnot6b	100	89.624	Cyprinodon_variegatus
ENSSFOG00015022383	cnot6a	96	86.201	ENSDARG00000101072	cnot6b	100	86.201	Danio_rerio
ENSSFOG00015022383	cnot6a	96	91.398	ENSDARG00000008255	cnot6a	100	91.398	Danio_rerio
ENSSFOG00015022383	cnot6a	96	86.738	ENSDNOG00000041644	CNOT6	100	86.738	Dasypus_novemcinctus
ENSSFOG00015022383	cnot6a	96	77.778	ENSDORG00000001708	Cnot6	100	77.778	Dipodomys_ordii
ENSSFOG00015022383	cnot6a	96	69.231	ENSETEG00000006975	CNOT6	100	69.231	Echinops_telfairi
ENSSFOG00015022383	cnot6a	86	81.038	ENSEASG00005012957	-	99	81.038	Equus_asinus_asinus
ENSSFOG00015022383	cnot6a	96	86.022	ENSEASG00005012794	-	100	86.022	Equus_asinus_asinus
ENSSFOG00015022383	cnot6a	96	81.004	ENSECAG00000012704	-	99	81.004	Equus_caballus
ENSSFOG00015022383	cnot6a	96	86.559	ENSECAG00000019325	CNOT6	100	86.559	Equus_caballus
ENSSFOG00015022383	cnot6a	96	85.484	ENSEEUG00000015382	CNOT6	100	85.484	Erinaceus_europaeus
ENSSFOG00015022383	cnot6a	96	86.772	ENSELUG00000015981	cnot6b	99	86.772	Esox_lucius
ENSSFOG00015022383	cnot6a	96	87.814	ENSELUG00000024580	cnot6a	100	87.814	Esox_lucius
ENSSFOG00015022383	cnot6a	96	86.559	ENSFCAG00000001881	CNOT6	100	86.559	Felis_catus
ENSSFOG00015022383	cnot6a	96	87.634	ENSFALG00000007699	CNOT6	100	87.634	Ficedula_albicollis
ENSSFOG00015022383	cnot6a	96	84.767	ENSFDAG00000001999	CNOT6	100	84.767	Fukomys_damarensis
ENSSFOG00015022383	cnot6a	62	92.857	ENSFHEG00000013756	cnot6b	96	92.857	Fundulus_heteroclitus
ENSSFOG00015022383	cnot6a	91	90.720	ENSGMOG00000009767	cnot6b	99	90.720	Gadus_morhua
ENSSFOG00015022383	cnot6a	96	87.455	ENSGALG00000034316	CNOT6	100	87.455	Gallus_gallus
ENSSFOG00015022383	cnot6a	96	89.982	ENSGAFG00000008525	cnot6b	100	89.982	Gambusia_affinis
ENSSFOG00015022383	cnot6a	91	88.847	ENSGACG00000018046	cnot6b	99	88.847	Gasterosteus_aculeatus
ENSSFOG00015022383	cnot6a	96	72.272	ENSGAGG00000012176	CNOT6	100	72.272	Gopherus_agassizii
ENSSFOG00015022383	cnot6a	96	85.663	ENSGGOG00000003675	CNOT6	100	85.663	Gorilla_gorilla
ENSSFOG00015022383	cnot6a	96	89.445	ENSHBUG00000002819	cnot6b	100	90.340	Haplochromis_burtoni
ENSSFOG00015022383	cnot6a	96	84.767	ENSHGLG00000017756	CNOT6	100	84.767	Heterocephalus_glaber_female
ENSSFOG00015022383	cnot6a	96	84.767	ENSHGLG00100005747	CNOT6	100	84.767	Heterocephalus_glaber_male
ENSSFOG00015022383	cnot6a	96	88.372	ENSHCOG00000016176	cnot6b	100	89.267	Hippocampus_comes
ENSSFOG00015022383	cnot6a	96	91.219	ENSIPUG00000019831	cnot6a	100	91.219	Ictalurus_punctatus
ENSSFOG00015022383	cnot6a	96	89.247	ENSIPUG00000017482	cnot6b	100	89.247	Ictalurus_punctatus
ENSSFOG00015022383	cnot6a	96	86.022	ENSSTOG00000002803	CNOT6	100	86.201	Ictidomys_tridecemlineatus
ENSSFOG00015022383	cnot6a	96	85.305	ENSJJAG00000012296	Cnot6	100	85.305	Jaculus_jaculus
ENSSFOG00015022383	cnot6a	96	89.445	ENSKMAG00000004640	cnot6b	100	89.445	Kryptolebias_marmoratus
ENSSFOG00015022383	cnot6a	96	89.088	ENSLBEG00000027917	cnot6b	100	89.982	Labrus_bergylta
ENSSFOG00015022383	cnot6a	96	91.935	ENSLOCG00000010102	cnot6b	99	91.935	Lepisosteus_oculatus
ENSSFOG00015022383	cnot6a	96	86.918	ENSLAFG00000016742	CNOT6	100	86.918	Loxodonta_africana
ENSSFOG00015022383	cnot6a	96	85.663	ENSMFAG00000030867	CNOT6	100	85.663	Macaca_fascicularis
ENSSFOG00015022383	cnot6a	96	85.663	ENSMMUG00000018690	CNOT6	100	85.663	Macaca_mulatta
ENSSFOG00015022383	cnot6a	96	85.663	ENSMNEG00000038565	CNOT6	100	85.663	Macaca_nemestrina
ENSSFOG00015022383	cnot6a	96	85.663	ENSMLEG00000010555	CNOT6	100	85.663	Mandrillus_leucophaeus
ENSSFOG00015022383	cnot6a	96	91.592	ENSMAMG00000007515	cnot6b	100	91.592	Mastacembelus_armatus
ENSSFOG00015022383	cnot6a	96	89.267	ENSMZEG00005012899	cnot6b	100	90.161	Maylandia_zebra
ENSSFOG00015022383	cnot6a	96	85.305	ENSMAUG00000019798	Cnot6	100	85.305	Mesocricetus_auratus
ENSSFOG00015022383	cnot6a	93	77.615	ENSMICG00000028378	-	99	77.615	Microcebus_murinus
ENSSFOG00015022383	cnot6a	96	84.588	ENSMICG00000013018	-	100	84.588	Microcebus_murinus
ENSSFOG00015022383	cnot6a	96	85.305	ENSMOCG00000021662	Cnot6	100	85.305	Microtus_ochrogaster
ENSSFOG00015022383	cnot6a	96	88.172	ENSMMOG00000003227	cnot6b	100	88.172	Mola_mola
ENSSFOG00015022383	cnot6a	96	86.738	ENSMODG00000003979	CNOT6	100	86.738	Monodelphis_domestica
ENSSFOG00015022383	cnot6a	96	91.234	ENSMALG00000014251	cnot6b	100	91.234	Monopterus_albus
ENSSFOG00015022383	cnot6a	96	85.484	MGP_CAROLIEiJ_G0016277	Cnot6	100	85.484	Mus_caroli
ENSSFOG00015022383	cnot6a	96	85.484	ENSMUSG00000020362	Cnot6	100	85.484	Mus_musculus
ENSSFOG00015022383	cnot6a	96	85.484	MGP_PahariEiJ_G0017413	Cnot6	100	85.484	Mus_pahari
ENSSFOG00015022383	cnot6a	96	85.484	MGP_SPRETEiJ_G0017122	Cnot6	100	85.484	Mus_spretus
ENSSFOG00015022383	cnot6a	96	86.738	ENSMPUG00000000587	CNOT6	96	86.738	Mustela_putorius_furo
ENSSFOG00015022383	cnot6a	96	84.902	ENSMLUG00000010257	CNOT6	100	84.725	Myotis_lucifugus
ENSSFOG00015022383	cnot6a	96	84.588	ENSNGAG00000008269	Cnot6	100	84.588	Nannospalax_galili
ENSSFOG00015022383	cnot6a	96	89.445	ENSNBRG00000010798	cnot6b	100	90.340	Neolamprologus_brichardi
ENSSFOG00015022383	cnot6a	96	84.767	ENSNLEG00000002322	CNOT6	100	84.767	Nomascus_leucogenys
ENSSFOG00015022383	cnot6a	78	81.395	ENSMEUG00000000025	CNOT6	81	81.395	Notamacropus_eugenii
ENSSFOG00015022383	cnot6a	84	87.857	ENSOPRG00000008244	-	88	87.857	Ochotona_princeps
ENSSFOG00015022383	cnot6a	96	84.588	ENSODEG00000007041	CNOT6	100	84.588	Octodon_degus
ENSSFOG00015022383	cnot6a	72	91.489	ENSONIG00000013027	cnot6b	99	91.489	Oreochromis_niloticus
ENSSFOG00015022383	cnot6a	96	85.842	ENSOANG00000010226	CNOT6	100	85.842	Ornithorhynchus_anatinus
ENSSFOG00015022383	cnot6a	96	85.536	ENSOCUG00000011083	CNOT6	100	85.536	Oryctolagus_cuniculus
ENSSFOG00015022383	cnot6a	96	89.982	ENSORLG00000005059	cnot6b	100	89.982	Oryzias_latipes
ENSSFOG00015022383	cnot6a	96	89.982	ENSORLG00020012784	cnot6b	100	89.982	Oryzias_latipes_hni
ENSSFOG00015022383	cnot6a	90	89.101	ENSORLG00015022658	cnot6b	98	89.101	Oryzias_latipes_hsok
ENSSFOG00015022383	cnot6a	96	90.519	ENSOMEG00000005295	cnot6b	100	90.519	Oryzias_melastigma
ENSSFOG00015022383	cnot6a	90	85.143	ENSOGAG00000032470	CNOT6	100	85.143	Otolemur_garnettii
ENSSFOG00015022383	cnot6a	93	85.451	ENSOARG00000001003	CNOT6	100	85.451	Ovis_aries
ENSSFOG00015022383	cnot6a	96	85.663	ENSPPAG00000032253	CNOT6	100	85.663	Pan_paniscus
ENSSFOG00015022383	cnot6a	96	86.380	ENSPPRG00000011912	CNOT6	100	86.380	Panthera_pardus
ENSSFOG00015022383	cnot6a	96	86.380	ENSPTIG00000016794	CNOT6	100	86.380	Panthera_tigris_altaica
ENSSFOG00015022383	cnot6a	96	85.663	ENSPTRG00000017636	CNOT6	100	85.663	Pan_troglodytes
ENSSFOG00015022383	cnot6a	96	85.663	ENSPANG00000016191	CNOT6	100	85.663	Papio_anubis
ENSSFOG00015022383	cnot6a	96	90.681	ENSPKIG00000021368	cnot6b	100	90.681	Paramormyrops_kingsleyae
ENSSFOG00015022383	cnot6a	93	87.339	ENSPSIG00000017307	CNOT6	100	87.339	Pelodiscus_sinensis
ENSSFOG00015022383	cnot6a	96	89.982	ENSPMGG00000011238	cnot6b	100	89.982	Periophthalmus_magnuspinnatus
ENSSFOG00015022383	cnot6a	96	84.409	ENSPEMG00000000627	Cnot6	100	84.409	Peromyscus_maniculatus_bairdii
ENSSFOG00015022383	cnot6a	96	86.738	ENSPCIG00000020319	CNOT6	99	86.918	Phascolarctos_cinereus
ENSSFOG00015022383	cnot6a	96	90.519	ENSPFOG00000006291	cnot6b	100	90.519	Poecilia_formosa
ENSSFOG00015022383	cnot6a	96	86.941	ENSPLAG00000008266	cnot6b	100	86.941	Poecilia_latipinna
ENSSFOG00015022383	cnot6a	96	90.519	ENSPMEG00000009091	cnot6b	100	90.519	Poecilia_mexicana
ENSSFOG00015022383	cnot6a	96	89.445	ENSPREG00000003713	cnot6b	100	89.445	Poecilia_reticulata
ENSSFOG00015022383	cnot6a	96	85.663	ENSPPYG00000016137	CNOT6	100	85.663	Pongo_abelii
ENSSFOG00015022383	cnot6a	68	81.648	ENSPCAG00000005599	-	71	81.648	Procavia_capensis
ENSSFOG00015022383	cnot6a	96	80.645	ENSPCOG00000017359	CNOT6	100	81.362	Propithecus_coquereli
ENSSFOG00015022383	cnot6a	96	82.616	ENSPVAG00000003069	CNOT6	100	82.616	Pteropus_vampyrus
ENSSFOG00015022383	cnot6a	96	89.088	ENSPNYG00000000321	cnot6b	100	89.982	Pundamilia_nyererei
ENSSFOG00015022383	cnot6a	96	92.473	ENSPNAG00000029586	cnot6a	100	92.473	Pygocentrus_nattereri
ENSSFOG00015022383	cnot6a	96	90.143	ENSPNAG00000028816	cnot6b	100	90.143	Pygocentrus_nattereri
ENSSFOG00015022383	cnot6a	96	84.767	ENSRNOG00000054891	Cnot6	100	84.767	Rattus_norvegicus
ENSSFOG00015022383	cnot6a	96	85.484	ENSRBIG00000004309	CNOT6	100	85.484	Rhinopithecus_bieti
ENSSFOG00015022383	cnot6a	96	85.484	ENSRROG00000035378	CNOT6	100	85.484	Rhinopithecus_roxellana
ENSSFOG00015022383	cnot6a	96	85.842	ENSSBOG00000030494	CNOT6	100	85.842	Saimiri_boliviensis_boliviensis
ENSSFOG00015022383	cnot6a	96	86.738	ENSSHAG00000017436	CNOT6	100	86.738	Sarcophilus_harrisii
ENSSFOG00015022383	cnot6a	96	89.624	ENSSMAG00000003084	cnot6b	100	89.624	Scophthalmus_maximus
ENSSFOG00015022383	cnot6a	96	91.592	ENSSDUG00000004151	cnot6b	100	91.592	Seriola_dumerili
ENSSFOG00015022383	cnot6a	96	90.698	ENSSLDG00000004448	cnot6b	100	91.592	Seriola_lalandi_dorsalis
ENSSFOG00015022383	cnot6a	62	68.524	ENSSARG00000012650	-	100	68.524	Sorex_araneus
ENSSFOG00015022383	cnot6a	96	87.276	ENSSPUG00000007893	CNOT6	100	87.276	Sphenodon_punctatus
ENSSFOG00015022383	cnot6a	96	91.592	ENSSPAG00000000149	cnot6b	100	91.592	Stegastes_partitus
ENSSFOG00015022383	cnot6a	96	86.201	ENSSSCG00000014009	CNOT6	100	86.201	Sus_scrofa
ENSSFOG00015022383	cnot6a	96	87.276	ENSTGUG00000001119	CNOT6	100	87.276	Taeniopygia_guttata
ENSSFOG00015022383	cnot6a	96	87.634	ENSTRUG00000002818	cnot6b	100	87.634	Takifugu_rubripes
ENSSFOG00015022383	cnot6a	96	88.710	ENSTNIG00000004443	cnot6b	99	88.710	Tetraodon_nigroviridis
ENSSFOG00015022383	cnot6a	73	76.119	ENSTBEG00000017094	-	87	76.119	Tupaia_belangeri
ENSSFOG00015022383	cnot6a	96	86.201	ENSTTRG00000009363	CNOT6	100	86.201	Tursiops_truncatus
ENSSFOG00015022383	cnot6a	86	75.149	ENSUAMG00000004579	CNOT6	99	75.149	Ursus_americanus
ENSSFOG00015022383	cnot6a	96	82.222	ENSUMAG00000024577	CNOT6	100	82.222	Ursus_maritimus
ENSSFOG00015022383	cnot6a	80	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSSFOG00015022383	cnot6a	96	86.380	ENSVVUG00000026940	CNOT6	100	86.380	Vulpes_vulpes
ENSSFOG00015022383	cnot6a	96	87.299	ENSXCOG00000003360	cnot6b	100	87.299	Xiphophorus_couchianus
ENSSFOG00015022383	cnot6a	96	90.519	ENSXMAG00000008730	cnot6b	100	90.519	Xiphophorus_maculatus