EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015022414 (Gene tree)
Gene ID: 108921552
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3216 bases
Position: chrKV410807.1:8798274-8801489
Accession: 108921552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015035190	RNase_T	PF00929.24	1.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015035574	-	1902	XM_018731046	ENSSFOP00015035190	188 (aa)	XP_018586562	-

Gene Model

Click here to download ENSSFOG00015022414's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022414	smfn	99	81.283	ENSG00000076043	REXO2	99	81.283	Homo_sapiens
ENSSFOG00015022414	smfn	62	78.448	ENSAPOG00000011971	smfn	100	78.448	Acanthochromis_polyacanthus
ENSSFOG00015022414	smfn	99	81.283	ENSAMEG00000013263	REXO2	79	81.283	Ailuropoda_melanoleuca
ENSSFOG00015022414	smfn	96	83.978	ENSACIG00000023553	smfn	97	83.978	Amphilophus_citrinellus
ENSSFOG00015022414	smfn	84	68.712	ENSAOCG00000011565	smfn	99	68.712	Amphiprion_ocellaris
ENSSFOG00015022414	smfn	99	82.258	ENSAPEG00000012435	smfn	69	82.258	Amphiprion_percula
ENSSFOG00015022414	smfn	98	81.622	ENSATEG00000015385	smfn	66	81.622	Anabas_testudineus
ENSSFOG00015022414	smfn	98	82.162	ENSAPLG00000005045	REXO2	92	82.162	Anas_platyrhynchos
ENSSFOG00015022414	smfn	93	73.563	ENSACAG00000011631	REXO2	81	73.563	Anolis_carolinensis
ENSSFOG00015022414	smfn	99	81.818	ENSANAG00000020834	REXO2	79	81.818	Aotus_nancymaae
ENSSFOG00015022414	smfn	77	62.759	ENSANAG00000027457	-	100	62.759	Aotus_nancymaae
ENSSFOG00015022414	smfn	97	80.769	ENSACLG00000024566	smfn	95	80.769	Astatotilapia_calliptera
ENSSFOG00015022414	smfn	99	81.283	ENSBTAG00000005843	REXO2	79	81.283	Bos_taurus
ENSSFOG00015022414	smfn	88	45.783	WBGene00007429	C08B6.8	88	53.623	Caenorhabditis_elegans
ENSSFOG00015022414	smfn	99	81.283	ENSCJAG00000012434	REXO2	79	81.283	Callithrix_jacchus
ENSSFOG00015022414	smfn	99	80.214	ENSCAFG00000013511	REXO2	79	80.214	Canis_familiaris
ENSSFOG00015022414	smfn	99	81.283	ENSCAFG00020002513	REXO2	79	81.283	Canis_lupus_dingo
ENSSFOG00015022414	smfn	99	81.283	ENSCHIG00000009264	REXO2	79	81.283	Capra_hircus
ENSSFOG00015022414	smfn	99	72.193	ENSTSYG00000027948	-	96	72.193	Carlito_syrichta
ENSSFOG00015022414	smfn	99	81.283	ENSTSYG00000002237	REXO2	79	81.283	Carlito_syrichta
ENSSFOG00015022414	smfn	99	81.283	ENSCAPG00000006093	REXO2	99	81.283	Cavia_aperea
ENSSFOG00015022414	smfn	99	81.818	ENSCPOG00000010548	REXO2	79	81.818	Cavia_porcellus
ENSSFOG00015022414	smfn	99	81.818	ENSCCAG00000034979	REXO2	79	81.818	Cebus_capucinus
ENSSFOG00015022414	smfn	99	81.283	ENSCATG00000015278	REXO2	79	81.283	Cercocebus_atys
ENSSFOG00015022414	smfn	99	81.818	ENSCLAG00000011195	REXO2	79	81.818	Chinchilla_lanigera
ENSSFOG00015022414	smfn	99	81.283	ENSCSAG00000002754	REXO2	79	81.283	Chlorocebus_sabaeus
ENSSFOG00015022414	smfn	99	80.214	ENSCHOG00000000642	-	79	80.214	Choloepus_hoffmanni
ENSSFOG00015022414	smfn	77	77.778	ENSCPBG00000009359	REXO2	99	77.778	Chrysemys_picta_bellii
ENSSFOG00015022414	smfn	88	57.229	ENSCING00000009858	-	80	57.229	Ciona_intestinalis
ENSSFOG00015022414	smfn	99	81.283	ENSCANG00000034756	REXO2	79	81.283	Colobus_angolensis_palliatus
ENSSFOG00015022414	smfn	99	81.283	ENSCGRG00001019814	-	79	81.283	Cricetulus_griseus_chok1gshd
ENSSFOG00015022414	smfn	98	80.541	ENSCGRG00001013673	-	90	80.541	Cricetulus_griseus_chok1gshd
ENSSFOG00015022414	smfn	99	78.610	ENSCGRG00001010922	-	91	78.610	Cricetulus_griseus_chok1gshd
ENSSFOG00015022414	smfn	99	81.283	ENSCGRG00000006235	Rexo2	79	81.283	Cricetulus_griseus_crigri
ENSSFOG00015022414	smfn	97	85.246	ENSCSEG00000007214	smfn	66	85.246	Cynoglossus_semilaevis
ENSSFOG00015022414	smfn	97	78.689	ENSCVAG00000012008	smfn	99	78.689	Cyprinodon_variegatus
ENSSFOG00015022414	smfn	96	83.978	ENSDARG00000009806	smfn	69	83.978	Danio_rerio
ENSSFOG00015022414	smfn	85	85.000	ENSDNOG00000046533	REXO2	77	85.000	Dasypus_novemcinctus
ENSSFOG00015022414	smfn	99	81.818	ENSDORG00000011255	Rexo2	79	81.818	Dipodomys_ordii
ENSSFOG00015022414	smfn	99	64.706	ENSDORG00000025142	-	81	64.706	Dipodomys_ordii
ENSSFOG00015022414	smfn	89	52.695	FBgn0039115	CG10214	79	52.695	Drosophila_melanogaster
ENSSFOG00015022414	smfn	91	76.608	ENSEBUG00000013964	REXO2	58	77.515	Eptatretus_burgeri
ENSSFOG00015022414	smfn	99	81.283	ENSEASG00005006674	REXO2	79	81.283	Equus_asinus_asinus
ENSSFOG00015022414	smfn	99	81.283	ENSECAG00000005988	REXO2	79	81.283	Equus_caballus
ENSSFOG00015022414	smfn	99	83.422	ENSELUG00000020072	smfn	65	83.422	Esox_lucius
ENSSFOG00015022414	smfn	99	81.283	ENSFCAG00000018632	REXO2	79	81.283	Felis_catus
ENSSFOG00015022414	smfn	99	80.214	ENSFALG00000010044	REXO2	93	80.214	Ficedula_albicollis
ENSSFOG00015022414	smfn	99	81.818	ENSFDAG00000011764	REXO2	79	81.818	Fukomys_damarensis
ENSSFOG00015022414	smfn	92	83.237	ENSGMOG00000006370	smfn	90	83.237	Gadus_morhua
ENSSFOG00015022414	smfn	98	81.081	ENSGALG00000035980	REXO2	80	80.214	Gallus_gallus
ENSSFOG00015022414	smfn	99	79.570	ENSGAFG00000015349	smfn	66	79.570	Gambusia_affinis
ENSSFOG00015022414	smfn	95	79.330	ENSGACG00000020096	smfn	88	79.330	Gasterosteus_aculeatus
ENSSFOG00015022414	smfn	99	81.283	ENSGAGG00000021126	REXO2	81	81.283	Gopherus_agassizii
ENSSFOG00015022414	smfn	99	81.283	ENSGGOG00000023267	REXO2	79	81.283	Gorilla_gorilla
ENSSFOG00015022414	smfn	68	81.102	ENSHBUG00000020097	REXO2	62	81.102	Haplochromis_burtoni
ENSSFOG00015022414	smfn	99	81.283	ENSHGLG00000013556	REXO2	79	81.283	Heterocephalus_glaber_female
ENSSFOG00015022414	smfn	99	81.818	ENSHGLG00100005257	REXO2	79	81.818	Heterocephalus_glaber_male
ENSSFOG00015022414	smfn	96	75.556	ENSHCOG00000007122	smfn	98	75.556	Hippocampus_comes
ENSSFOG00015022414	smfn	97	86.339	ENSIPUG00000020440	rexo2	68	86.339	Ictalurus_punctatus
ENSSFOG00015022414	smfn	99	81.818	ENSSTOG00000012465	REXO2	79	81.818	Ictidomys_tridecemlineatus
ENSSFOG00015022414	smfn	99	81.818	ENSJJAG00000013710	-	79	81.818	Jaculus_jaculus
ENSSFOG00015022414	smfn	99	57.219	ENSJJAG00000022605	-	73	57.219	Jaculus_jaculus
ENSSFOG00015022414	smfn	97	80.328	ENSKMAG00000016795	smfn	65	79.891	Kryptolebias_marmoratus
ENSSFOG00015022414	smfn	96	82.873	ENSLBEG00000006021	smfn	96	82.873	Labrus_bergylta
ENSSFOG00015022414	smfn	97	71.892	ENSLACG00000018623	REXO2	75	71.892	Latimeria_chalumnae
ENSSFOG00015022414	smfn	98	87.568	ENSLOCG00000002389	smfn	88	87.568	Lepisosteus_oculatus
ENSSFOG00015022414	smfn	99	81.283	ENSLAFG00000012451	REXO2	79	81.283	Loxodonta_africana
ENSSFOG00015022414	smfn	99	81.283	ENSMFAG00000041155	REXO2	79	81.283	Macaca_fascicularis
ENSSFOG00015022414	smfn	99	81.283	ENSMMUG00000012269	REXO2	79	81.283	Macaca_mulatta
ENSSFOG00015022414	smfn	99	81.283	ENSMNEG00000033379	REXO2	79	81.283	Macaca_nemestrina
ENSSFOG00015022414	smfn	99	81.283	ENSMLEG00000036571	REXO2	79	81.283	Mandrillus_leucophaeus
ENSSFOG00015022414	smfn	98	82.162	ENSMAMG00000021209	smfn	67	82.162	Mastacembelus_armatus
ENSSFOG00015022414	smfn	96	80.663	ENSMZEG00005020730	REXO2	69	80.663	Maylandia_zebra
ENSSFOG00015022414	smfn	96	80.663	ENSMZEG00005023224	-	69	80.663	Maylandia_zebra
ENSSFOG00015022414	smfn	85	80.247	ENSMGAG00000003026	REXO2	99	80.247	Meleagris_gallopavo
ENSSFOG00015022414	smfn	99	81.283	ENSMAUG00000014576	Rexo2	79	81.283	Mesocricetus_auratus
ENSSFOG00015022414	smfn	99	81.818	ENSMICG00000010094	REXO2	79	81.818	Microcebus_murinus
ENSSFOG00015022414	smfn	99	81.283	ENSMOCG00000009016	Rexo2	79	81.283	Microtus_ochrogaster
ENSSFOG00015022414	smfn	96	80.110	ENSMMOG00000006430	smfn	67	80.110	Mola_mola
ENSSFOG00015022414	smfn	99	82.353	ENSMODG00000013913	REXO2	79	82.353	Monodelphis_domestica
ENSSFOG00015022414	smfn	98	81.622	ENSMALG00000018130	smfn	53	81.622	Monopterus_albus
ENSSFOG00015022414	smfn	98	80.000	MGP_CAROLIEiJ_G0032166	Rexo2	78	80.000	Mus_caroli
ENSSFOG00015022414	smfn	99	79.679	ENSMUSG00000032026	Rexo2	79	79.679	Mus_musculus
ENSSFOG00015022414	smfn	99	79.679	MGP_PahariEiJ_G0015034	Rexo2	79	79.679	Mus_pahari
ENSSFOG00015022414	smfn	99	79.679	MGP_SPRETEiJ_G0033305	Rexo2	79	79.679	Mus_spretus
ENSSFOG00015022414	smfn	99	81.283	ENSMPUG00000003947	REXO2	79	81.283	Mustela_putorius_furo
ENSSFOG00015022414	smfn	99	80.749	ENSMLUG00000009030	REXO2	79	80.749	Myotis_lucifugus
ENSSFOG00015022414	smfn	99	81.283	ENSNGAG00000008819	Rexo2	91	81.283	Nannospalax_galili
ENSSFOG00015022414	smfn	97	80.220	ENSNBRG00000006529	smfn	96	80.220	Neolamprologus_brichardi
ENSSFOG00015022414	smfn	99	81.283	ENSNLEG00000029745	REXO2	79	81.283	Nomascus_leucogenys
ENSSFOG00015022414	smfn	99	81.818	ENSMEUG00000011558	REXO2	86	81.818	Notamacropus_eugenii
ENSSFOG00015022414	smfn	71	80.451	ENSOPRG00000011076	REXO2	56	80.451	Ochotona_princeps
ENSSFOG00015022414	smfn	99	81.818	ENSODEG00000009750	-	99	81.818	Octodon_degus
ENSSFOG00015022414	smfn	86	67.081	ENSODEG00000016046	-	79	67.081	Octodon_degus
ENSSFOG00015022414	smfn	96	82.320	ENSONIG00000001954	smfn	77	82.320	Oreochromis_niloticus
ENSSFOG00015022414	smfn	98	81.081	ENSOANG00000001754	REXO2	79	80.214	Ornithorhynchus_anatinus
ENSSFOG00015022414	smfn	99	81.283	ENSOCUG00000004274	REXO2	75	81.283	Oryctolagus_cuniculus
ENSSFOG00015022414	smfn	98	83.243	ENSORLG00000005119	smfn	60	83.243	Oryzias_latipes
ENSSFOG00015022414	smfn	98	83.784	ENSORLG00020010121	smfn	60	83.784	Oryzias_latipes_hni
ENSSFOG00015022414	smfn	98	83.243	ENSORLG00015015699	smfn	60	83.243	Oryzias_latipes_hsok
ENSSFOG00015022414	smfn	76	79.577	ENSOMEG00000008940	-	99	79.577	Oryzias_melastigma
ENSSFOG00015022414	smfn	98	80.000	ENSOMEG00000016878	REXO2	68	80.000	Oryzias_melastigma
ENSSFOG00015022414	smfn	99	81.818	ENSOGAG00000016860	REXO2	79	81.818	Otolemur_garnettii
ENSSFOG00015022414	smfn	99	81.283	ENSOARG00000001040	REXO2	88	81.283	Ovis_aries
ENSSFOG00015022414	smfn	99	81.283	ENSPPAG00000039849	REXO2	79	81.283	Pan_paniscus
ENSSFOG00015022414	smfn	99	81.283	ENSPPRG00000007255	REXO2	79	81.283	Panthera_pardus
ENSSFOG00015022414	smfn	99	81.283	ENSPTIG00000015578	REXO2	99	81.283	Panthera_tigris_altaica
ENSSFOG00015022414	smfn	99	81.283	ENSPTRG00000004306	REXO2	79	81.283	Pan_troglodytes
ENSSFOG00015022414	smfn	99	81.283	ENSPANG00000010675	REXO2	79	81.283	Papio_anubis
ENSSFOG00015022414	smfn	97	87.912	ENSPKIG00000000911	smfn	77	89.865	Paramormyrops_kingsleyae
ENSSFOG00015022414	smfn	99	82.353	ENSPSIG00000005151	REXO2	68	82.353	Pelodiscus_sinensis
ENSSFOG00015022414	smfn	98	83.243	ENSPMGG00000007442	smfn	98	83.243	Periophthalmus_magnuspinnatus
ENSSFOG00015022414	smfn	85	74.375	ENSPEMG00000001421	Rexo2	74	73.125	Peromyscus_maniculatus_bairdii
ENSSFOG00015022414	smfn	61	78.947	ENSPMAG00000001022	REXO2	98	78.947	Petromyzon_marinus
ENSSFOG00015022414	smfn	98	80.541	ENSPFOG00000017861	smfn	91	80.541	Poecilia_formosa
ENSSFOG00015022414	smfn	87	76.687	ENSPLAG00000007327	REXO2	62	76.687	Poecilia_latipinna
ENSSFOG00015022414	smfn	98	80.541	ENSPMEG00000017343	smfn	66	80.541	Poecilia_mexicana
ENSSFOG00015022414	smfn	97	80.874	ENSPREG00000016438	smfn	65	80.874	Poecilia_reticulata
ENSSFOG00015022414	smfn	99	81.283	ENSPPYG00000003895	REXO2	79	81.283	Pongo_abelii
ENSSFOG00015022414	smfn	99	80.749	ENSPCAG00000005237	REXO2	79	80.749	Procavia_capensis
ENSSFOG00015022414	smfn	78	84.247	ENSPCOG00000027639	REXO2	75	84.247	Propithecus_coquereli
ENSSFOG00015022414	smfn	85	80.503	ENSPVAG00000005295	REXO2	67	80.503	Pteropus_vampyrus
ENSSFOG00015022414	smfn	96	80.663	ENSPNYG00000018401	smfn	69	80.663	Pundamilia_nyererei
ENSSFOG00015022414	smfn	99	87.166	ENSPNAG00000005290	smfn	69	87.166	Pygocentrus_nattereri
ENSSFOG00015022414	smfn	99	80.214	ENSRNOG00000018939	Rexo2	79	80.214	Rattus_norvegicus
ENSSFOG00015022414	smfn	99	81.283	ENSRBIG00000037809	REXO2	79	81.283	Rhinopithecus_bieti
ENSSFOG00015022414	smfn	99	81.283	ENSRROG00000038928	REXO2	79	81.283	Rhinopithecus_roxellana
ENSSFOG00015022414	smfn	91	42.458	YLR059C	REX2	67	42.458	Saccharomyces_cerevisiae
ENSSFOG00015022414	smfn	99	81.818	ENSSBOG00000028651	REXO2	79	81.818	Saimiri_boliviensis_boliviensis
ENSSFOG00015022414	smfn	98	82.703	ENSSHAG00000008008	REXO2	79	82.703	Sarcophilus_harrisii
ENSSFOG00015022414	smfn	98	81.081	ENSSMAG00000003168	smfn	67	81.081	Scophthalmus_maximus
ENSSFOG00015022414	smfn	98	83.784	ENSSDUG00000015624	smfn	65	83.784	Seriola_dumerili
ENSSFOG00015022414	smfn	98	83.784	ENSSLDG00000014005	smfn	65	83.784	Seriola_lalandi_dorsalis
ENSSFOG00015022414	smfn	68	85.039	ENSSARG00000014530	REXO2	100	85.039	Sorex_araneus
ENSSFOG00015022414	smfn	85	76.730	ENSSPUG00000006005	REXO2	85	76.730	Sphenodon_punctatus
ENSSFOG00015022414	smfn	99	84.946	ENSSPAG00000001530	smfn	100	84.946	Stegastes_partitus
ENSSFOG00015022414	smfn	99	81.283	ENSSSCG00000015056	REXO2	79	81.283	Sus_scrofa
ENSSFOG00015022414	smfn	99	79.144	ENSTGUG00000000121	REXO2	80	79.144	Taeniopygia_guttata
ENSSFOG00015022414	smfn	99	78.495	ENSTRUG00000021529	smfn	68	78.495	Takifugu_rubripes
ENSSFOG00015022414	smfn	96	81.768	ENSTNIG00000008588	smfn	80	81.768	Tetraodon_nigroviridis
ENSSFOG00015022414	smfn	99	81.818	ENSTBEG00000017040	REXO2	79	81.818	Tupaia_belangeri
ENSSFOG00015022414	smfn	99	80.749	ENSTTRG00000014928	REXO2	79	80.749	Tursiops_truncatus
ENSSFOG00015022414	smfn	99	73.545	ENSUAMG00000019096	REXO2	75	83.562	Ursus_americanus
ENSSFOG00015022414	smfn	99	81.283	ENSUMAG00000003770	REXO2	79	81.283	Ursus_maritimus
ENSSFOG00015022414	smfn	99	62.567	ENSVPAG00000006301	REXO2	99	62.567	Vicugna_pacos
ENSSFOG00015022414	smfn	99	81.283	ENSVVUG00000025223	REXO2	79	81.283	Vulpes_vulpes
ENSSFOG00015022414	smfn	97	82.967	ENSXETG00000012648	rexo2	75	82.514	Xenopus_tropicalis
ENSSFOG00015022414	smfn	98	77.838	ENSXCOG00000018838	smfn	94	77.838	Xiphophorus_couchianus
ENSSFOG00015022414	smfn	98	77.297	ENSXMAG00000021125	smfn	59	77.297	Xiphophorus_maculatus