EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015022433 (Gene tree)
Gene ID: 108933536
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 8704 bases
Position: chrKV411038.1:1878135-1886838
Accession: 108933536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015035221	RNA_pol_Rpc34	PF05158.12	3.6e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015035605	-	3818	XM_018750678	ENSSFOP00015035221	312 (aa)	XP_018606194	A0A0P7XPB2

Gene Model

Click here to download ENSSFOG00015022433's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03020	RNA polymerase	KEGG
sfm04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022433	polr3f	100	89.557	ENSG00000132664	POLR3F	100	89.557	Homo_sapiens
ENSSFOG00015022433	polr3f	100	89.241	ENSAPOG00000008271	polr3f	100	89.241	Acanthochromis_polyacanthus
ENSSFOG00015022433	polr3f	100	89.241	ENSAMEG00000005222	POLR3F	100	89.241	Ailuropoda_melanoleuca
ENSSFOG00015022433	polr3f	100	86.218	ENSACIG00000006705	polr3f	100	86.218	Amphilophus_citrinellus
ENSSFOG00015022433	polr3f	100	89.241	ENSAOCG00000000687	polr3f	100	89.241	Amphiprion_ocellaris
ENSSFOG00015022433	polr3f	100	88.924	ENSAPEG00000015263	polr3f	100	88.924	Amphiprion_percula
ENSSFOG00015022433	polr3f	88	93.091	ENSATEG00000015539	polr3f	100	93.091	Anabas_testudineus
ENSSFOG00015022433	polr3f	88	92.364	ENSAPLG00000005533	POLR3F	100	92.364	Anas_platyrhynchos
ENSSFOG00015022433	polr3f	100	88.462	ENSACAG00000014293	POLR3F	100	88.462	Anolis_carolinensis
ENSSFOG00015022433	polr3f	100	89.873	ENSANAG00000026726	POLR3F	100	89.873	Aotus_nancymaae
ENSSFOG00015022433	polr3f	100	90.823	ENSACLG00000003615	polr3f	100	90.823	Astatotilapia_calliptera
ENSSFOG00015022433	polr3f	100	93.631	ENSAMXG00000036020	polr3f	100	93.631	Astyanax_mexicanus
ENSSFOG00015022433	polr3f	100	88.924	ENSBTAG00000008825	POLR3F	100	88.924	Bos_taurus
ENSSFOG00015022433	polr3f	99	33.762	WBGene00021112	W09C3.4	99	33.762	Caenorhabditis_elegans
ENSSFOG00015022433	polr3f	100	89.873	ENSCJAG00000005159	POLR3F	100	89.873	Callithrix_jacchus
ENSSFOG00015022433	polr3f	100	88.924	ENSCAFG00000005420	POLR3F	100	88.924	Canis_familiaris
ENSSFOG00015022433	polr3f	100	88.924	ENSCAFG00020027500	POLR3F	100	88.924	Canis_lupus_dingo
ENSSFOG00015022433	polr3f	100	88.924	ENSCHIG00000014743	POLR3F	100	88.924	Capra_hircus
ENSSFOG00015022433	polr3f	100	88.924	ENSTSYG00000004207	POLR3F	100	88.924	Carlito_syrichta
ENSSFOG00015022433	polr3f	95	49.662	ENSCAPG00000008423	POLR3F	100	49.662	Cavia_aperea
ENSSFOG00015022433	polr3f	100	88.608	ENSCPOG00000002400	POLR3F	100	88.608	Cavia_porcellus
ENSSFOG00015022433	polr3f	100	79.747	ENSCCAG00000021800	POLR3F	100	79.747	Cebus_capucinus
ENSSFOG00015022433	polr3f	100	89.241	ENSCATG00000019507	POLR3F	100	89.241	Cercocebus_atys
ENSSFOG00015022433	polr3f	100	89.241	ENSCLAG00000016296	POLR3F	100	89.241	Chinchilla_lanigera
ENSSFOG00015022433	polr3f	100	89.241	ENSCSAG00000011513	POLR3F	100	89.241	Chlorocebus_sabaeus
ENSSFOG00015022433	polr3f	73	91.011	ENSCHOG00000013268	POLR3F	73	91.011	Choloepus_hoffmanni
ENSSFOG00015022433	polr3f	88	92.364	ENSCPBG00000023473	POLR3F	100	92.364	Chrysemys_picta_bellii
ENSSFOG00015022433	polr3f	99	60.828	ENSCING00000001212	-	99	60.828	Ciona_intestinalis
ENSSFOG00015022433	polr3f	71	60.538	ENSCSAVG00000003340	-	96	65.680	Ciona_savignyi
ENSSFOG00015022433	polr3f	92	89.347	ENSCANG00000037390	POLR3F	100	89.347	Colobus_angolensis_palliatus
ENSSFOG00015022433	polr3f	100	88.924	ENSCGRG00001002032	Polr3f	100	88.924	Cricetulus_griseus_chok1gshd
ENSSFOG00015022433	polr3f	100	88.924	ENSCGRG00000010852	Polr3f	100	88.924	Cricetulus_griseus_crigri
ENSSFOG00015022433	polr3f	100	87.975	ENSCSEG00000001247	polr3f	100	87.975	Cynoglossus_semilaevis
ENSSFOG00015022433	polr3f	100	89.241	ENSCVAG00000007611	polr3f	100	89.241	Cyprinodon_variegatus
ENSSFOG00015022433	polr3f	100	95.541	ENSDARG00000012572	polr3f	100	95.541	Danio_rerio
ENSSFOG00015022433	polr3f	100	86.076	ENSDNOG00000010719	POLR3F	100	86.076	Dasypus_novemcinctus
ENSSFOG00015022433	polr3f	100	89.241	ENSDORG00000016352	Polr3f	100	89.241	Dipodomys_ordii
ENSSFOG00015022433	polr3f	93	52.069	FBgn0038951	CG5380	96	52.069	Drosophila_melanogaster
ENSSFOG00015022433	polr3f	88	54.348	ENSETEG00000015485	-	98	54.348	Echinops_telfairi
ENSSFOG00015022433	polr3f	100	77.564	ENSEBUG00000006783	polr3f	100	77.564	Eptatretus_burgeri
ENSSFOG00015022433	polr3f	100	89.557	ENSEASG00005002022	POLR3F	100	89.557	Equus_asinus_asinus
ENSSFOG00015022433	polr3f	100	89.557	ENSECAG00000009920	POLR3F	100	89.557	Equus_caballus
ENSSFOG00015022433	polr3f	79	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSSFOG00015022433	polr3f	100	94.586	ENSELUG00000001558	polr3f	100	94.586	Esox_lucius
ENSSFOG00015022433	polr3f	100	89.241	ENSFCAG00000013828	POLR3F	100	89.241	Felis_catus
ENSSFOG00015022433	polr3f	88	93.455	ENSFALG00000007623	POLR3F	100	93.455	Ficedula_albicollis
ENSSFOG00015022433	polr3f	100	88.924	ENSFDAG00000002528	POLR3F	100	88.924	Fukomys_damarensis
ENSSFOG00015022433	polr3f	100	88.291	ENSFHEG00000006450	polr3f	100	88.291	Fundulus_heteroclitus
ENSSFOG00015022433	polr3f	100	91.401	ENSGALG00000008749	POLR3F	100	91.401	Gallus_gallus
ENSSFOG00015022433	polr3f	100	90.190	ENSGAFG00000003698	polr3f	100	90.190	Gambusia_affinis
ENSSFOG00015022433	polr3f	100	90.127	ENSGAGG00000006151	POLR3F	100	90.127	Gopherus_agassizii
ENSSFOG00015022433	polr3f	100	89.557	ENSGGOG00000011543	POLR3F	100	89.557	Gorilla_gorilla
ENSSFOG00015022433	polr3f	100	91.139	ENSHBUG00000013806	polr3f	100	91.139	Haplochromis_burtoni
ENSSFOG00015022433	polr3f	100	88.924	ENSHGLG00000011867	POLR3F	100	88.924	Heterocephalus_glaber_female
ENSSFOG00015022433	polr3f	100	88.924	ENSHGLG00100012577	POLR3F	100	88.924	Heterocephalus_glaber_male
ENSSFOG00015022433	polr3f	100	79.114	ENSHCOG00000011751	polr3f	100	79.114	Hippocampus_comes
ENSSFOG00015022433	polr3f	100	94.268	ENSIPUG00000013347	polr3f	100	94.268	Ictalurus_punctatus
ENSSFOG00015022433	polr3f	100	89.241	ENSSTOG00000013588	POLR3F	100	89.241	Ictidomys_tridecemlineatus
ENSSFOG00015022433	polr3f	100	88.608	ENSJJAG00000017513	Polr3f	100	88.608	Jaculus_jaculus
ENSSFOG00015022433	polr3f	88	84.727	ENSKMAG00000016495	polr3f	100	84.727	Kryptolebias_marmoratus
ENSSFOG00015022433	polr3f	74	96.552	ENSLBEG00000011998	polr3f	100	96.552	Labrus_bergylta
ENSSFOG00015022433	polr3f	100	91.720	ENSLACG00000009371	POLR3F	100	91.720	Latimeria_chalumnae
ENSSFOG00015022433	polr3f	100	94.268	ENSLOCG00000015701	polr3f	100	94.268	Lepisosteus_oculatus
ENSSFOG00015022433	polr3f	100	88.924	ENSLAFG00000004929	POLR3F	100	88.924	Loxodonta_africana
ENSSFOG00015022433	polr3f	100	89.241	ENSMFAG00000002227	POLR3F	100	89.241	Macaca_fascicularis
ENSSFOG00015022433	polr3f	88	92.000	ENSMMUG00000004143	POLR3F	100	92.000	Macaca_mulatta
ENSSFOG00015022433	polr3f	100	89.241	ENSMNEG00000033404	POLR3F	100	89.241	Macaca_nemestrina
ENSSFOG00015022433	polr3f	100	89.241	ENSMLEG00000021905	POLR3F	100	89.241	Mandrillus_leucophaeus
ENSSFOG00015022433	polr3f	100	89.557	ENSMAMG00000017975	polr3f	100	89.557	Mastacembelus_armatus
ENSSFOG00015022433	polr3f	100	90.506	ENSMZEG00005015134	polr3f	100	90.506	Maylandia_zebra
ENSSFOG00015022433	polr3f	100	91.720	ENSMGAG00000006691	POLR3F	100	91.720	Meleagris_gallopavo
ENSSFOG00015022433	polr3f	100	88.608	ENSMAUG00000020176	Polr3f	100	88.608	Mesocricetus_auratus
ENSSFOG00015022433	polr3f	100	89.241	ENSMICG00000044519	POLR3F	100	89.241	Microcebus_murinus
ENSSFOG00015022433	polr3f	100	88.924	ENSMOCG00000018352	Polr3f	100	88.924	Microtus_ochrogaster
ENSSFOG00015022433	polr3f	95	92.256	ENSMMOG00000018477	polr3f	100	92.256	Mola_mola
ENSSFOG00015022433	polr3f	100	89.241	ENSMODG00000005624	POLR3F	100	89.241	Monodelphis_domestica
ENSSFOG00015022433	polr3f	100	90.190	ENSMALG00000006685	polr3f	100	90.190	Monopterus_albus
ENSSFOG00015022433	polr3f	100	88.291	MGP_CAROLIEiJ_G0024385	Polr3f	100	88.291	Mus_caroli
ENSSFOG00015022433	polr3f	100	88.291	ENSMUSG00000027427	Polr3f	100	88.291	Mus_musculus
ENSSFOG00015022433	polr3f	100	88.291	MGP_PahariEiJ_G0025829	Polr3f	100	88.291	Mus_pahari
ENSSFOG00015022433	polr3f	100	88.291	MGP_SPRETEiJ_G0025304	Polr3f	100	88.291	Mus_spretus
ENSSFOG00015022433	polr3f	100	68.308	ENSMPUG00000001252	-	100	68.308	Mustela_putorius_furo
ENSSFOG00015022433	polr3f	100	89.241	ENSMLUG00000014844	POLR3F	100	89.241	Myotis_lucifugus
ENSSFOG00015022433	polr3f	100	87.975	ENSNGAG00000010898	Polr3f	100	87.975	Nannospalax_galili
ENSSFOG00015022433	polr3f	100	91.456	ENSNBRG00000020796	polr3f	100	91.456	Neolamprologus_brichardi
ENSSFOG00015022433	polr3f	100	89.557	ENSNLEG00000009778	POLR3F	100	89.557	Nomascus_leucogenys
ENSSFOG00015022433	polr3f	95	85.085	ENSMEUG00000010320	POLR3F	100	85.085	Notamacropus_eugenii
ENSSFOG00015022433	polr3f	100	88.608	ENSOPRG00000003385	POLR3F	100	88.608	Ochotona_princeps
ENSSFOG00015022433	polr3f	100	89.557	ENSODEG00000011521	POLR3F	100	89.557	Octodon_degus
ENSSFOG00015022433	polr3f	100	89.557	ENSONIG00000006858	polr3f	100	89.557	Oreochromis_niloticus
ENSSFOG00015022433	polr3f	100	89.557	ENSOANG00000001253	POLR3F	100	89.557	Ornithorhynchus_anatinus
ENSSFOG00015022433	polr3f	100	89.557	ENSOCUG00000015067	POLR3F	100	89.557	Oryctolagus_cuniculus
ENSSFOG00015022433	polr3f	100	86.709	ENSORLG00000022412	polr3f	100	86.709	Oryzias_latipes
ENSSFOG00015022433	polr3f	100	86.709	ENSORLG00020021944	polr3f	100	86.709	Oryzias_latipes_hni
ENSSFOG00015022433	polr3f	100	88.291	ENSOGAG00000002916	POLR3F	100	88.291	Otolemur_garnettii
ENSSFOG00015022433	polr3f	100	54.114	ENSOARG00000008647	-	100	54.114	Ovis_aries
ENSSFOG00015022433	polr3f	100	88.924	ENSOARG00000000315	-	100	88.924	Ovis_aries
ENSSFOG00015022433	polr3f	100	89.557	ENSPPAG00000036681	POLR3F	100	89.557	Pan_paniscus
ENSSFOG00015022433	polr3f	100	89.241	ENSPPRG00000024604	POLR3F	100	89.241	Panthera_pardus
ENSSFOG00015022433	polr3f	100	89.241	ENSPTIG00000020292	POLR3F	100	89.241	Panthera_tigris_altaica
ENSSFOG00015022433	polr3f	100	89.557	ENSPTRG00000013287	POLR3F	100	89.557	Pan_troglodytes
ENSSFOG00015022433	polr3f	100	89.241	ENSPANG00000025015	POLR3F	100	89.241	Papio_anubis
ENSSFOG00015022433	polr3f	100	95.541	ENSPKIG00000004427	polr3f	100	95.541	Paramormyrops_kingsleyae
ENSSFOG00015022433	polr3f	88	93.455	ENSPSIG00000016613	POLR3F	100	93.455	Pelodiscus_sinensis
ENSSFOG00015022433	polr3f	100	55.172	ENSPMGG00000018350	polr3f	100	58.861	Periophthalmus_magnuspinnatus
ENSSFOG00015022433	polr3f	100	89.241	ENSPEMG00000006966	Polr3f	100	89.241	Peromyscus_maniculatus_bairdii
ENSSFOG00015022433	polr3f	100	81.529	ENSPMAG00000005530	polr3f	100	81.529	Petromyzon_marinus
ENSSFOG00015022433	polr3f	100	88.924	ENSPCIG00000000908	POLR3F	85	88.924	Phascolarctos_cinereus
ENSSFOG00015022433	polr3f	100	89.557	ENSPFOG00000018334	polr3f	100	89.557	Poecilia_formosa
ENSSFOG00015022433	polr3f	100	89.557	ENSPLAG00000021803	polr3f	100	89.557	Poecilia_latipinna
ENSSFOG00015022433	polr3f	100	89.557	ENSPMEG00000013150	polr3f	100	89.557	Poecilia_mexicana
ENSSFOG00015022433	polr3f	100	89.557	ENSPREG00000005278	polr3f	100	89.557	Poecilia_reticulata
ENSSFOG00015022433	polr3f	100	89.557	ENSPPYG00000010737	POLR3F	100	89.557	Pongo_abelii
ENSSFOG00015022433	polr3f	65	91.892	ENSPCAG00000004893	POLR3F	71	91.892	Procavia_capensis
ENSSFOG00015022433	polr3f	100	89.241	ENSPCOG00000004543	POLR3F	100	89.241	Propithecus_coquereli
ENSSFOG00015022433	polr3f	100	89.241	ENSPVAG00000000403	POLR3F	100	89.241	Pteropus_vampyrus
ENSSFOG00015022433	polr3f	100	91.139	ENSPNYG00000016276	polr3f	100	91.139	Pundamilia_nyererei
ENSSFOG00015022433	polr3f	100	95.860	ENSPNAG00000005164	polr3f	100	95.860	Pygocentrus_nattereri
ENSSFOG00015022433	polr3f	100	88.608	ENSRNOG00000007548	Polr3f	85	88.608	Rattus_norvegicus
ENSSFOG00015022433	polr3f	100	89.241	ENSRBIG00000021268	POLR3F	100	89.241	Rhinopithecus_bieti
ENSSFOG00015022433	polr3f	100	89.241	ENSRROG00000039911	POLR3F	100	89.241	Rhinopithecus_roxellana
ENSSFOG00015022433	polr3f	100	89.873	ENSSBOG00000018207	POLR3F	100	89.873	Saimiri_boliviensis_boliviensis
ENSSFOG00015022433	polr3f	100	71.028	ENSSHAG00000018160	POLR3F	100	71.118	Sarcophilus_harrisii
ENSSFOG00015022433	polr3f	100	88.291	ENSSMAG00000021029	polr3f	100	88.291	Scophthalmus_maximus
ENSSFOG00015022433	polr3f	100	79.430	ENSSDUG00000022435	polr3f	100	79.430	Seriola_dumerili
ENSSFOG00015022433	polr3f	100	90.506	ENSSLDG00000012761	polr3f	100	90.506	Seriola_lalandi_dorsalis
ENSSFOG00015022433	polr3f	100	80.696	ENSSARG00000006039	POLR3F	100	80.696	Sorex_araneus
ENSSFOG00015022433	polr3f	100	89.490	ENSSPUG00000001873	POLR3F	100	89.490	Sphenodon_punctatus
ENSSFOG00015022433	polr3f	100	81.646	ENSSPAG00000002092	polr3f	100	81.646	Stegastes_partitus
ENSSFOG00015022433	polr3f	100	88.924	ENSSSCG00000007095	POLR3F	100	93.534	Sus_scrofa
ENSSFOG00015022433	polr3f	100	91.401	ENSTGUG00000005839	POLR3F	100	91.401	Taeniopygia_guttata
ENSSFOG00015022433	polr3f	100	88.608	ENSTRUG00000012101	polr3f	100	88.608	Takifugu_rubripes
ENSSFOG00015022433	polr3f	100	87.658	ENSTNIG00000006456	polr3f	100	87.658	Tetraodon_nigroviridis
ENSSFOG00015022433	polr3f	100	72.785	ENSTBEG00000007921	POLR3F	100	72.785	Tupaia_belangeri
ENSSFOG00015022433	polr3f	100	88.924	ENSTTRG00000002580	POLR3F	100	88.924	Tursiops_truncatus
ENSSFOG00015022433	polr3f	53	90.964	ENSUAMG00000024166	POLR3F	100	90.964	Ursus_americanus
ENSSFOG00015022433	polr3f	100	88.924	ENSUMAG00000024944	POLR3F	100	88.924	Ursus_maritimus
ENSSFOG00015022433	polr3f	100	88.924	ENSVPAG00000009063	POLR3F	100	88.924	Vicugna_pacos
ENSSFOG00015022433	polr3f	100	88.924	ENSVVUG00000012925	POLR3F	100	88.924	Vulpes_vulpes
ENSSFOG00015022433	polr3f	100	90.127	ENSXETG00000024898	polr3f	100	90.127	Xenopus_tropicalis
ENSSFOG00015022433	polr3f	88	91.273	ENSXCOG00000010301	polr3f	100	91.273	Xiphophorus_couchianus
ENSSFOG00015022433	polr3f	100	89.241	ENSXMAG00000004604	polr3f	100	89.241	Xiphophorus_maculatus