EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015022746 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 2033 bases
Position: chrKV410799.1:1030632-1032664
Accession: 108940976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015035748	RRM_1	PF00076.22	3e-18	1	1
ENSSFOP00015035736	RRM_1	PF00076.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036125	RNPS1-201	834	XM_018763392	ENSSFOP00015035736	277 (aa)	XP_018618908	-
ENSSFOT00015036137	RNPS1-202	831	-	ENSSFOP00015035748	276 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015022746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015022746	RNPS1	85	73.932	ENSSFOG00015019341	-	73	74.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022746	RNPS1	87	67.500	ENSG00000205937	RNPS1	86	76.027	Homo_sapiens
ENSSFOG00015022746	RNPS1	85	70.638	ENSAPOG00000017310	RNPS1	74	73.932	Acanthochromis_polyacanthus
ENSSFOG00015022746	RNPS1	87	67.364	ENSAMEG00000017861	RNPS1	78	73.333	Ailuropoda_melanoleuca
ENSSFOG00015022746	RNPS1	83	72.489	ENSACIG00000014367	-	82	72.489	Amphilophus_citrinellus
ENSSFOG00015022746	RNPS1	85	74.468	ENSAOCG00000002404	RNPS1	83	74.468	Amphiprion_ocellaris
ENSSFOG00015022746	RNPS1	85	74.359	ENSAPEG00000006497	RNPS1	80	74.359	Amphiprion_percula
ENSSFOG00015022746	RNPS1	85	71.915	ENSATEG00000024267	RNPS1	83	76.596	Anabas_testudineus
ENSSFOG00015022746	RNPS1	87	54.393	ENSAPLG00000006231	RNPS1	56	81.600	Anas_platyrhynchos
ENSSFOG00015022746	RNPS1	87	67.083	ENSANAG00000028802	RNPS1	85	73.029	Aotus_nancymaae
ENSSFOG00015022746	RNPS1	85	71.915	ENSACLG00000025942	RNPS1	82	72.766	Astatotilapia_calliptera
ENSSFOG00015022746	RNPS1	85	74.468	ENSAMXG00000006330	-	82	75.319	Astyanax_mexicanus
ENSSFOG00015022746	RNPS1	79	67.281	ENSBTAG00000009969	RNPS1	77	73.973	Bos_taurus
ENSSFOG00015022746	RNPS1	87	67.500	ENSCJAG00000014969	RNPS1	90	70.233	Callithrix_jacchus
ENSSFOG00015022746	RNPS1	87	67.364	ENSCAFG00000019397	RNPS1	78	73.333	Canis_familiaris
ENSSFOG00015022746	RNPS1	87	67.364	ENSCAFG00020026159	RNPS1	86	71.782	Canis_lupus_dingo
ENSSFOG00015022746	RNPS1	91	57.371	ENSCHIG00000027175	-	72	59.346	Capra_hircus
ENSSFOG00015022746	RNPS1	79	64.055	ENSTSYG00000031848	-	89	70.183	Carlito_syrichta
ENSSFOG00015022746	RNPS1	87	67.500	ENSTSYG00000001629	RNPS1	85	73.444	Carlito_syrichta
ENSSFOG00015022746	RNPS1	87	66.946	ENSCAPG00000007731	RNPS1	78	72.917	Cavia_aperea
ENSSFOG00015022746	RNPS1	87	67.083	ENSCPOG00000002066	RNPS1	85	73.029	Cavia_porcellus
ENSSFOG00015022746	RNPS1	87	67.083	ENSCCAG00000034480	RNPS1	85	73.029	Cebus_capucinus
ENSSFOG00015022746	RNPS1	87	67.500	ENSCATG00000013756	RNPS1	85	73.444	Cercocebus_atys
ENSSFOG00015022746	RNPS1	97	61.049	ENSCATG00000042361	-	80	74.583	Cercocebus_atys
ENSSFOG00015022746	RNPS1	87	67.500	ENSCLAG00000015546	RNPS1	85	73.444	Chinchilla_lanigera
ENSSFOG00015022746	RNPS1	87	70.539	ENSCSAG00000005219	-	81	72.199	Chlorocebus_sabaeus
ENSSFOG00015022746	RNPS1	87	66.946	ENSCHOG00000004866	RNPS1	78	72.917	Choloepus_hoffmanni
ENSSFOG00015022746	RNPS1	76	52.358	ENSCPBG00000000214	RNPS1	75	54.630	Chrysemys_picta_bellii
ENSSFOG00015022746	RNPS1	87	67.500	ENSCANG00000041307	RNPS1	85	73.444	Colobus_angolensis_palliatus
ENSSFOG00015022746	RNPS1	87	67.500	ENSCGRG00001020431	Rnps1	85	73.444	Cricetulus_griseus_chok1gshd
ENSSFOG00015022746	RNPS1	79	67.431	ENSCGRG00000014021	Rnps1	78	73.973	Cricetulus_griseus_crigri
ENSSFOG00015022746	RNPS1	85	70.940	ENSCSEG00000015997	RNPS1	80	73.077	Cynoglossus_semilaevis
ENSSFOG00015022746	RNPS1	85	66.383	ENSCSEG00000000402	RNPS1	76	68.085	Cynoglossus_semilaevis
ENSSFOG00015022746	RNPS1	80	72.273	ENSCVAG00000010868	RNPS1	78	77.027	Cyprinodon_variegatus
ENSSFOG00015022746	RNPS1	85	71.064	ENSDARG00000100188	RNPS1	83	72.340	Danio_rerio
ENSSFOG00015022746	RNPS1	85	71.064	ENSDARG00000116743	rnps1	83	72.340	Danio_rerio
ENSSFOG00015022746	RNPS1	87	67.364	ENSDNOG00000016081	RNPS1	78	73.333	Dasypus_novemcinctus
ENSSFOG00015022746	RNPS1	87	67.500	ENSDORG00000001755	Rnps1	85	73.444	Dipodomys_ordii
ENSSFOG00015022746	RNPS1	87	67.364	ENSEASG00005004862	RNPS1	78	73.333	Equus_asinus_asinus
ENSSFOG00015022746	RNPS1	79	61.927	ENSECAG00000023288	RNPS1	78	68.493	Equus_caballus
ENSSFOG00015022746	RNPS1	83	75.983	ENSELUG00000015003	RNPS1	82	68.996	Esox_lucius
ENSSFOG00015022746	RNPS1	87	67.917	ENSFCAG00000007690	RNPS1	85	73.859	Felis_catus
ENSSFOG00015022746	RNPS1	87	68.619	ENSFALG00000004868	RNPS1	84	74.583	Ficedula_albicollis
ENSSFOG00015022746	RNPS1	87	67.500	ENSFDAG00000003386	RNPS1	85	73.444	Fukomys_damarensis
ENSSFOG00015022746	RNPS1	80	75.455	ENSFHEG00000011705	RNPS1	78	75.225	Fundulus_heteroclitus
ENSSFOG00015022746	RNPS1	87	68.750	ENSGALG00000009288	RNPS1	85	74.689	Gallus_gallus
ENSSFOG00015022746	RNPS1	80	72.727	ENSGAFG00000005457	RNPS1	78	78.378	Gambusia_affinis
ENSSFOG00015022746	RNPS1	85	76.596	ENSGACG00000011261	RNPS1	83	76.596	Gasterosteus_aculeatus
ENSSFOG00015022746	RNPS1	85	63.136	ENSGACG00000005641	-	82	67.373	Gasterosteus_aculeatus
ENSSFOG00015022746	RNPS1	87	66.527	ENSGAGG00000010452	RNPS1	78	72.500	Gopherus_agassizii
ENSSFOG00015022746	RNPS1	87	67.500	ENSGGOG00000014275	RNPS1	85	73.444	Gorilla_gorilla
ENSSFOG00015022746	RNPS1	75	63.768	ENSGGOG00000026421	-	79	70.673	Gorilla_gorilla
ENSSFOG00015022746	RNPS1	85	71.489	ENSHBUG00000002494	RNPS1	82	72.340	Haplochromis_burtoni
ENSSFOG00015022746	RNPS1	79	66.359	ENSHGLG00000013666	-	72	64.055	Heterocephalus_glaber_female
ENSSFOG00015022746	RNPS1	81	66.518	ENSHGLG00000006292	-	88	73.853	Heterocephalus_glaber_female
ENSSFOG00015022746	RNPS1	87	67.500	ENSHGLG00000013957	RNPS1	85	73.444	Heterocephalus_glaber_female
ENSSFOG00015022746	RNPS1	91	67.857	ENSHGLG00100015267	-	79	69.369	Heterocephalus_glaber_male
ENSSFOG00015022746	RNPS1	79	66.359	ENSHGLG00100011327	-	72	64.055	Heterocephalus_glaber_male
ENSSFOG00015022746	RNPS1	87	72.917	ENSHGLG00100001721	-	78	70.833	Heterocephalus_glaber_male
ENSSFOG00015022746	RNPS1	79	58.447	ENSHGLG00100017879	-	72	64.840	Heterocephalus_glaber_male
ENSSFOG00015022746	RNPS1	87	67.500	ENSHGLG00100003539	RNPS1	85	73.444	Heterocephalus_glaber_male
ENSSFOG00015022746	RNPS1	71	65.174	ENSHGLG00100011610	-	84	68.447	Heterocephalus_glaber_male
ENSSFOG00015022746	RNPS1	85	66.390	ENSHCOG00000004424	RNPS1	83	74.274	Hippocampus_comes
ENSSFOG00015022746	RNPS1	76	71.226	ENSJJAG00000019234	-	62	70.833	Jaculus_jaculus
ENSSFOG00015022746	RNPS1	87	67.917	ENSJJAG00000015576	-	85	73.859	Jaculus_jaculus
ENSSFOG00015022746	RNPS1	85	72.340	ENSKMAG00000009135	RNPS1	82	76.596	Kryptolebias_marmoratus
ENSSFOG00015022746	RNPS1	85	70.213	ENSLACG00000007112	RNPS1	83	76.271	Latimeria_chalumnae
ENSSFOG00015022746	RNPS1	84	66.094	ENSLOCG00000001758	RNPS1	82	75.641	Lepisosteus_oculatus
ENSSFOG00015022746	RNPS1	79	72.477	ENSMFAG00000044121	-	75	69.683	Macaca_fascicularis
ENSSFOG00015022746	RNPS1	87	67.500	ENSMFAG00000042142	RNPS1	85	73.444	Macaca_fascicularis
ENSSFOG00015022746	RNPS1	88	66.939	ENSMMUG00000041726	-	84	72.500	Macaca_mulatta
ENSSFOG00015022746	RNPS1	74	65.025	ENSMMUG00000019238	-	79	72.059	Macaca_mulatta
ENSSFOG00015022746	RNPS1	88	67.347	ENSMNEG00000024827	-	76	70.183	Macaca_nemestrina
ENSSFOG00015022746	RNPS1	75	65.865	ENSMLEG00000040232	-	86	66.516	Mandrillus_leucophaeus
ENSSFOG00015022746	RNPS1	87	67.500	ENSMLEG00000036928	RNPS1	85	73.444	Mandrillus_leucophaeus
ENSSFOG00015022746	RNPS1	85	71.489	ENSMAMG00000021148	-	81	69.787	Mastacembelus_armatus
ENSSFOG00015022746	RNPS1	85	72.340	ENSMAMG00000021609	-	83	77.021	Mastacembelus_armatus
ENSSFOG00015022746	RNPS1	85	71.915	ENSMZEG00005012742	RNPS1	82	72.766	Maylandia_zebra
ENSSFOG00015022746	RNPS1	79	68.349	ENSMGAG00000010042	RNPS1	90	74.886	Meleagris_gallopavo
ENSSFOG00015022746	RNPS1	87	67.500	ENSMICG00000031543	RNPS1	85	73.444	Microcebus_murinus
ENSSFOG00015022746	RNPS1	87	67.500	ENSMOCG00000003429	Rnps1	85	73.444	Microtus_ochrogaster
ENSSFOG00015022746	RNPS1	73	68.293	ENSMMOG00000004680	-	77	67.713	Mola_mola
ENSSFOG00015022746	RNPS1	83	73.362	ENSMMOG00000010863	RNPS1	82	74.672	Mola_mola
ENSSFOG00015022746	RNPS1	76	64.220	ENSMODG00000015891	RNPS1	78	78.008	Monodelphis_domestica
ENSSFOG00015022746	RNPS1	85	59.149	ENSMALG00000013384	-	85	65.532	Monopterus_albus
ENSSFOG00015022746	RNPS1	87	67.500	ENSMUSG00000034681	Rnps1	85	73.444	Mus_musculus
ENSSFOG00015022746	RNPS1	87	67.500	MGP_PahariEiJ_G0023498	Rnps1	85	73.444	Mus_pahari
ENSSFOG00015022746	RNPS1	87	67.500	MGP_SPRETEiJ_G0022092	Rnps1	85	73.444	Mus_spretus
ENSSFOG00015022746	RNPS1	87	67.364	ENSMLUG00000016808	RNPS1	78	73.333	Myotis_lucifugus
ENSSFOG00015022746	RNPS1	87	67.500	ENSNGAG00000023702	Rnps1	85	73.444	Nannospalax_galili
ENSSFOG00015022746	RNPS1	83	73.799	ENSNBRG00000023437	RNPS1	82	73.799	Neolamprologus_brichardi
ENSSFOG00015022746	RNPS1	90	66.265	ENSNLEG00000009243	RNPS1	88	73.516	Nomascus_leucogenys
ENSSFOG00015022746	RNPS1	87	66.527	ENSMEUG00000008882	RNPS1	78	72.500	Notamacropus_eugenii
ENSSFOG00015022746	RNPS1	87	68.619	ENSOPRG00000016422	RNPS1	78	74.583	Ochotona_princeps
ENSSFOG00015022746	RNPS1	58	55.556	ENSODEG00000002513	-	60	55.882	Octodon_degus
ENSSFOG00015022746	RNPS1	87	69.456	ENSOCUG00000004387	-	78	69.456	Oryctolagus_cuniculus
ENSSFOG00015022746	RNPS1	85	67.797	ENSORLG00000008033	RNPS1	94	71.498	Oryzias_latipes
ENSSFOG00015022746	RNPS1	85	65.532	ENSORLG00020020207	RNPS1	82	70.085	Oryzias_latipes_hni
ENSSFOG00015022746	RNPS1	85	65.532	ENSORLG00015000305	-	82	70.085	Oryzias_latipes_hsok
ENSSFOG00015022746	RNPS1	74	64.216	ENSPPAG00000037836	-	86	71.220	Pan_paniscus
ENSSFOG00015022746	RNPS1	89	63.968	ENSPPAG00000011845	RNPS1	86	69.295	Pan_paniscus
ENSSFOG00015022746	RNPS1	87	67.917	ENSPPRG00000011255	RNPS1	85	73.859	Panthera_pardus
ENSSFOG00015022746	RNPS1	55	72.368	ENSPTIG00000015643	RNPS1	81	74.675	Panthera_tigris_altaica
ENSSFOG00015022746	RNPS1	75	64.251	ENSPTRG00000046326	-	86	73.303	Pan_troglodytes
ENSSFOG00015022746	RNPS1	87	67.083	ENSPTRG00000031310	RNPS1	85	73.029	Pan_troglodytes
ENSSFOG00015022746	RNPS1	87	67.500	ENSPANG00000015748	RNPS1	85	73.444	Papio_anubis
ENSSFOG00015022746	RNPS1	75	49.038	ENSPANG00000033576	-	81	50.698	Papio_anubis
ENSSFOG00015022746	RNPS1	85	85.532	ENSPKIG00000023465	RNPS1	83	83.475	Paramormyrops_kingsleyae
ENSSFOG00015022746	RNPS1	87	66.527	ENSPSIG00000006048	RNPS1	78	72.500	Pelodiscus_sinensis
ENSSFOG00015022746	RNPS1	87	67.500	ENSPEMG00000012797	Rnps1	85	73.444	Peromyscus_maniculatus_bairdii
ENSSFOG00015022746	RNPS1	87	66.667	ENSPCIG00000025012	RNPS1	85	72.614	Phascolarctos_cinereus
ENSSFOG00015022746	RNPS1	55	74.342	ENSPCIG00000016114	-	63	83.846	Phascolarctos_cinereus
ENSSFOG00015022746	RNPS1	80	73.636	ENSPFOG00000009978	RNPS1	78	78.378	Poecilia_formosa
ENSSFOG00015022746	RNPS1	80	73.636	ENSPLAG00000009343	RNPS1	78	78.378	Poecilia_latipinna
ENSSFOG00015022746	RNPS1	80	73.636	ENSPMEG00000008552	RNPS1	78	78.378	Poecilia_mexicana
ENSSFOG00015022746	RNPS1	80	73.636	ENSPREG00000001843	RNPS1	78	78.378	Poecilia_reticulata
ENSSFOG00015022746	RNPS1	87	65.272	ENSPCAG00000004514	RNPS1	78	71.250	Procavia_capensis
ENSSFOG00015022746	RNPS1	87	67.500	ENSPCOG00000005478	RNPS1	85	73.444	Propithecus_coquereli
ENSSFOG00015022746	RNPS1	87	67.364	ENSPVAG00000005105	RNPS1	78	73.333	Pteropus_vampyrus
ENSSFOG00015022746	RNPS1	85	71.915	ENSPNYG00000000585	RNPS1	82	72.766	Pundamilia_nyererei
ENSSFOG00015022746	RNPS1	85	72.766	ENSPNAG00000025479	RNPS1	82	74.894	Pygocentrus_nattereri
ENSSFOG00015022746	RNPS1	87	65.975	ENSRNOG00000027239	AABR07037800.1	78	66.667	Rattus_norvegicus
ENSSFOG00015022746	RNPS1	87	66.946	ENSRNOG00000008703	Rnps1	78	72.917	Rattus_norvegicus
ENSSFOG00015022746	RNPS1	87	67.500	ENSRBIG00000038965	-	88	73.333	Rhinopithecus_bieti
ENSSFOG00015022746	RNPS1	87	67.500	ENSRROG00000041252	RNPS1	85	73.444	Rhinopithecus_roxellana
ENSSFOG00015022746	RNPS1	87	67.500	ENSSBOG00000027927	RNPS1	85	73.444	Saimiri_boliviensis_boliviensis
ENSSFOG00015022746	RNPS1	87	66.527	ENSSHAG00000016951	RNPS1	78	72.500	Sarcophilus_harrisii
ENSSFOG00015022746	RNPS1	85	72.340	ENSSMAG00000016933	RNPS1	82	74.894	Scophthalmus_maximus
ENSSFOG00015022746	RNPS1	85	71.915	ENSSDUG00000011453	RNPS1	83	76.596	Seriola_dumerili
ENSSFOG00015022746	RNPS1	82	68.444	ENSSLDG00000021341	RNPS1	80	75.336	Seriola_lalandi_dorsalis
ENSSFOG00015022746	RNPS1	87	67.364	ENSSPUG00000016588	RNPS1	78	73.333	Sphenodon_punctatus
ENSSFOG00015022746	RNPS1	87	67.782	ENSSSCG00000008048	RNPS1	78	73.750	Sus_scrofa
ENSSFOG00015022746	RNPS1	87	68.619	ENSTGUG00000003237	RNPS1	84	74.583	Taeniopygia_guttata
ENSSFOG00015022746	RNPS1	85	68.644	ENSTRUG00000008602	RNPS1	83	73.729	Takifugu_rubripes
ENSSFOG00015022746	RNPS1	85	68.936	ENSTNIG00000009753	RNPS1	81	74.043	Tetraodon_nigroviridis
ENSSFOG00015022746	RNPS1	90	68.145	ENSTBEG00000009098	RNPS1	88	73.333	Tupaia_belangeri
ENSSFOG00015022746	RNPS1	87	67.364	ENSTTRG00000008220	RNPS1	78	73.333	Tursiops_truncatus
ENSSFOG00015022746	RNPS1	87	67.364	ENSUAMG00000004462	RNPS1	88	73.333	Ursus_americanus
ENSSFOG00015022746	RNPS1	87	67.364	ENSUMAG00000022327	RNPS1	78	73.333	Ursus_maritimus
ENSSFOG00015022746	RNPS1	87	67.364	ENSVVUG00000009244	RNPS1	78	73.333	Vulpes_vulpes
ENSSFOG00015022746	RNPS1	82	71.053	ENSXETG00000024439	rnps1	71	76.364	Xenopus_tropicalis
ENSSFOG00015022746	RNPS1	85	73.617	ENSXMAG00000004827	RNPS1	82	77.872	Xiphophorus_maculatus