EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015022796 (Gene tree)
Gene ID: 108934469
Gene Symbol: hnrnph1l
Alias: fb19a06|wu:fb19a06|zgc:55399|zgc:85960
Full Name: heterogeneous nuclear ribonucleoprotein H-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7372 bases
Position: chrKV411071.1:4431084-4438455
Accession: 108934469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015035811	zf-RNPHF	PF08080.12	5.1e-08	1	1
ENSSFOP00015035793	zf-RNPHF	PF08080.12	1.9e-07	1	1
ENSSFOP00015035793	RRM_1	PF00076.22	1.4e-31	1	3
ENSSFOP00015035793	RRM_1	PF00076.22	1.4e-31	2	3
ENSSFOP00015035793	RRM_1	PF00076.22	1.4e-31	3	3
ENSSFOP00015035811	RRM_1	PF00076.22	3.6e-27	1	2
ENSSFOP00015035811	RRM_1	PF00076.22	3.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036182	-	3443	XM_018752338	ENSSFOP00015035793	411 (aa)	XP_018607854	A0A0P7VJ38
ENSSFOT00015036200	-	1149	-	ENSSFOP00015035811	382 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015022796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015022796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015022796	hnrnph1l	88	38.177	ENSSFOG00015014620	grsf1	78	39.429
ENSSFOG00015022796	hnrnph1l	99	91.579	ENSSFOG00015016055	-	96	93.590
ENSSFOG00015022796	hnrnph1l	99	60.383	ENSSFOG00015015000	hnrnph3	95	62.730

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015022796	hnrnph1l	100	89.051	ENSAPOG00000016614	hnrnph1	99	90.026	Acanthochromis_polyacanthus
ENSSFOG00015022796	hnrnph1l	100	89.267	ENSACIG00000008964	hnrnph1	98	91.557	Amphilophus_citrinellus
ENSSFOG00015022796	hnrnph1l	99	90.026	ENSAOCG00000008372	hnrnph1	98	91.022	Amphiprion_ocellaris
ENSSFOG00015022796	hnrnph1l	99	89.764	ENSAPEG00000012980	hnrnph1	98	90.773	Amphiprion_percula
ENSSFOG00015022796	hnrnph1l	99	89.764	ENSATEG00000002792	hnrnph1	98	90.773	Anabas_testudineus
ENSSFOG00015022796	hnrnph1l	97	76.263	ENSACAG00000016323	-	94	75.688	Anolis_carolinensis
ENSSFOG00015022796	hnrnph1l	90	87.709	ENSACLG00000003313	hnrnph1	96	89.916	Astatotilapia_calliptera
ENSSFOG00015022796	hnrnph1l	100	89.078	ENSAMXG00000002483	hnrnph1	99	90.501	Astyanax_mexicanus
ENSSFOG00015022796	hnrnph1l	99	84.737	ENSAMXG00000030703	hnrnph1l	82	85.894	Astyanax_mexicanus
ENSSFOG00015022796	hnrnph1l	99	88.189	ENSCSEG00000015891	hnrnph1	98	88.834	Cynoglossus_semilaevis
ENSSFOG00015022796	hnrnph1l	100	87.105	ENSCVAG00000014097	hnrnph1	97	89.646	Cyprinodon_variegatus
ENSSFOG00015022796	hnrnph1l	100	86.649	ENSDARG00000040881	hnrnph1	98	88.665	Danio_rerio
ENSSFOG00015022796	hnrnph1l	99	87.139	ENSDARG00000005551	hnrnph1l	97	88.442	Danio_rerio
ENSSFOG00015022796	hnrnph1l	100	84.038	ENSELUG00000006715	hnrnph1	98	85.194	Esox_lucius
ENSSFOG00015022796	hnrnph1l	99	85.340	ENSELUG00000021437	-	99	90.551	Esox_lucius
ENSSFOG00015022796	hnrnph1l	99	87.664	ENSFHEG00000008474	hnrnph1	98	89.673	Fundulus_heteroclitus
ENSSFOG00015022796	hnrnph1l	100	82.707	ENSGMOG00000006782	hnrnph1	97	85.606	Gadus_morhua
ENSSFOG00015022796	hnrnph1l	100	88.078	ENSGAFG00000006280	hnrnph1	98	90.250	Gambusia_affinis
ENSSFOG00015022796	hnrnph1l	100	84.428	ENSGACG00000018352	hnrnph1	98	86.783	Gasterosteus_aculeatus
ENSSFOG00015022796	hnrnph1l	90	87.709	ENSHBUG00000010547	hnrnph1	97	89.916	Haplochromis_burtoni
ENSSFOG00015022796	hnrnph1l	100	80.660	ENSHCOG00000004513	hnrnph1	96	84.069	Hippocampus_comes
ENSSFOG00015022796	hnrnph1l	100	86.650	ENSIPUG00000018262	hnrnph1	96	88.413	Ictalurus_punctatus
ENSSFOG00015022796	hnrnph1l	99	83.421	ENSIPUG00000024047	hnrnph1l	94	85.176	Ictalurus_punctatus
ENSSFOG00015022796	hnrnph1l	100	85.507	ENSKMAG00000018802	hnrnph1	97	88.471	Kryptolebias_marmoratus
ENSSFOG00015022796	hnrnph1l	99	88.189	ENSLBEG00000027811	hnrnph1	98	89.277	Labrus_bergylta
ENSSFOG00015022796	hnrnph1l	100	86.732	ENSLOCG00000012510	hnrnph1	92	86.486	Lepisosteus_oculatus
ENSSFOG00015022796	hnrnph1l	99	54.398	ENSMMUG00000017392	-	93	55.825	Macaca_mulatta
ENSSFOG00015022796	hnrnph1l	99	54.398	ENSMNEG00000030544	-	93	55.825	Macaca_nemestrina
ENSSFOG00015022796	hnrnph1l	92	85.561	ENSMAMG00000011478	hnrnph1	99	87.668	Mastacembelus_armatus
ENSSFOG00015022796	hnrnph1l	100	88.078	ENSMZEG00005009791	hnrnph1	97	90.657	Maylandia_zebra
ENSSFOG00015022796	hnrnph1l	100	87.047	ENSMMOG00000009064	hnrnph1	98	89.295	Mola_mola
ENSSFOG00015022796	hnrnph1l	79	52.994	ENSMODG00000002200	-	99	53.453	Monodelphis_domestica
ENSSFOG00015022796	hnrnph1l	91	88.122	ENSMALG00000003999	hnrnph1	99	90.833	Monopterus_albus
ENSSFOG00015022796	hnrnph1l	90	87.709	ENSNBRG00000015406	hnrnph1	97	89.916	Neolamprologus_brichardi
ENSSFOG00015022796	hnrnph1l	100	88.321	ENSONIG00000017754	hnrnph1	97	90.909	Oreochromis_niloticus
ENSSFOG00015022796	hnrnph1l	100	86.091	ENSORLG00000006932	hnrnph1	98	87.715	Oryzias_latipes
ENSSFOG00015022796	hnrnph1l	100	85.851	ENSORLG00020007881	hnrnph1	98	87.715	Oryzias_latipes_hni
ENSSFOG00015022796	hnrnph1l	100	86.091	ENSORLG00015005306	hnrnph1	98	87.715	Oryzias_latipes_hsok
ENSSFOG00015022796	hnrnph1l	99	88.421	ENSOMEG00000009827	hnrnph1	99	91.029	Oryzias_melastigma
ENSSFOG00015022796	hnrnph1l	99	82.836	ENSPKIG00000009532	-	97	83.848	Paramormyrops_kingsleyae
ENSSFOG00015022796	hnrnph1l	100	92.944	ENSPKIG00000018203	hnrnph1l	97	93.703	Paramormyrops_kingsleyae
ENSSFOG00015022796	hnrnph1l	100	85.888	ENSPMGG00000012151	hnrnph1	96	87.848	Periophthalmus_magnuspinnatus
ENSSFOG00015022796	hnrnph1l	100	88.312	ENSPFOG00000004097	hnrnph1	98	90.250	Poecilia_formosa
ENSSFOG00015022796	hnrnph1l	100	88.078	ENSPLAG00000011771	hnrnph1	98	90.250	Poecilia_latipinna
ENSSFOG00015022796	hnrnph1l	100	88.321	ENSPMEG00000019446	hnrnph1	97	90.909	Poecilia_mexicana
ENSSFOG00015022796	hnrnph1l	100	88.321	ENSPREG00000005780	hnrnph1	98	90.500	Poecilia_reticulata
ENSSFOG00015022796	hnrnph1l	100	88.078	ENSPNYG00000000204	hnrnph1	97	90.657	Pundamilia_nyererei
ENSSFOG00015022796	hnrnph1l	100	86.165	ENSPNAG00000002784	hnrnph1l	97	86.935	Pygocentrus_nattereri
ENSSFOG00015022796	hnrnph1l	100	88.835	ENSPNAG00000000439	hnrnph1	98	88.630	Pygocentrus_nattereri
ENSSFOG00015022796	hnrnph1l	99	87.113	ENSSMAG00000007820	hnrnph1	95	89.351	Scophthalmus_maximus
ENSSFOG00015022796	hnrnph1l	99	90.026	ENSSDUG00000008785	hnrnph1	98	91.022	Seriola_dumerili
ENSSFOG00015022796	hnrnph1l	99	90.026	ENSSLDG00000010685	hnrnph1	98	91.022	Seriola_lalandi_dorsalis
ENSSFOG00015022796	hnrnph1l	100	89.538	ENSSPAG00000009921	hnrnph1	98	90.773	Stegastes_partitus
ENSSFOG00015022796	hnrnph1l	100	85.645	ENSTRUG00000020069	hnrnph1	97	88.889	Takifugu_rubripes
ENSSFOG00015022796	hnrnph1l	99	75.000	ENSXETG00000018321	hnrnph1	95	76.429	Xenopus_tropicalis
ENSSFOG00015022796	hnrnph1l	100	85.894	ENSXCOG00000009133	hnrnph1	97	88.071	Xiphophorus_couchianus
ENSSFOG00015022796	hnrnph1l	100	89.267	ENSXMAG00000021332	hnrnph1	99	91.557	Xiphophorus_maculatus