EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015023020 (Gene tree)
Gene ID: 108932625
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11053 bases
Position: chrKV410795.1:10731477-10742529
Accession: 108932625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015036169	RTC	PF01137.21	1.4e-57	1	1
ENSSFOP00015036169	RTC_insert	PF05189.13	5.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036562	-	3325	XM_018749169	ENSSFOP00015036169	372 (aa)	XP_018604685	A0A1W4ZV92

Gene Model

Click here to download ENSSFOG00015023020's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023020	rcl1	100	78.342	ENSG00000120158	RCL1	96	87.023	Homo_sapiens
ENSSFOG00015023020	rcl1	100	81.452	ENSAPOG00000015666	rcl1	100	81.452	Acanthochromis_polyacanthus
ENSSFOG00015023020	rcl1	100	79.947	ENSAMEG00000002631	RCL1	100	79.947	Ailuropoda_melanoleuca
ENSSFOG00015023020	rcl1	100	81.183	ENSACIG00000021195	rcl1	100	81.183	Amphilophus_citrinellus
ENSSFOG00015023020	rcl1	100	80.108	ENSAOCG00000002223	rcl1	100	80.108	Amphiprion_ocellaris
ENSSFOG00015023020	rcl1	100	80.108	ENSAPEG00000006905	rcl1	100	80.108	Amphiprion_percula
ENSSFOG00015023020	rcl1	100	78.226	ENSATEG00000020026	rcl1	100	78.226	Anabas_testudineus
ENSSFOG00015023020	rcl1	88	76.292	ENSAPLG00000006031	RCL1	100	76.292	Anas_platyrhynchos
ENSSFOG00015023020	rcl1	100	74.599	ENSACAG00000003640	RCL1	100	74.599	Anolis_carolinensis
ENSSFOG00015023020	rcl1	100	78.342	ENSANAG00000037372	RCL1	100	78.342	Aotus_nancymaae
ENSSFOG00015023020	rcl1	100	81.183	ENSACLG00000021724	rcl1	100	81.183	Astatotilapia_calliptera
ENSSFOG00015023020	rcl1	99	80.435	ENSAMXG00000033394	rcl1	99	80.435	Astyanax_mexicanus
ENSSFOG00015023020	rcl1	99	44.444	WBGene00022852	ZK1127.5	99	44.444	Caenorhabditis_elegans
ENSSFOG00015023020	rcl1	100	78.342	ENSCJAG00000011202	RCL1	100	78.342	Callithrix_jacchus
ENSSFOG00015023020	rcl1	100	79.144	ENSCAFG00000002091	RCL1	100	79.144	Canis_familiaris
ENSSFOG00015023020	rcl1	100	79.144	ENSCAFG00020000638	RCL1	78	79.144	Canis_lupus_dingo
ENSSFOG00015023020	rcl1	100	77.807	ENSCHIG00000012407	RCL1	100	77.807	Capra_hircus
ENSSFOG00015023020	rcl1	88	80.488	ENSTSYG00000009592	RCL1	97	81.868	Carlito_syrichta
ENSSFOG00015023020	rcl1	69	65.318	ENSCAPG00000013575	RCL1	100	65.318	Cavia_aperea
ENSSFOG00015023020	rcl1	100	78.342	ENSCPOG00000015354	RCL1	100	78.342	Cavia_porcellus
ENSSFOG00015023020	rcl1	100	78.342	ENSCCAG00000033505	RCL1	97	81.421	Cebus_capucinus
ENSSFOG00015023020	rcl1	100	78.342	ENSCATG00000034721	RCL1	100	78.342	Cercocebus_atys
ENSSFOG00015023020	rcl1	100	78.075	ENSCLAG00000007445	RCL1	100	78.075	Chinchilla_lanigera
ENSSFOG00015023020	rcl1	100	78.342	ENSCSAG00000008811	RCL1	100	78.342	Chlorocebus_sabaeus
ENSSFOG00015023020	rcl1	86	69.659	ENSCHOG00000007216	RCL1	100	69.659	Choloepus_hoffmanni
ENSSFOG00015023020	rcl1	100	78.610	ENSCPBG00000025481	RCL1	94	80.000	Chrysemys_picta_bellii
ENSSFOG00015023020	rcl1	100	56.533	ENSCING00000019565	-	99	56.533	Ciona_intestinalis
ENSSFOG00015023020	rcl1	100	78.342	ENSCANG00000027099	RCL1	100	78.342	Colobus_angolensis_palliatus
ENSSFOG00015023020	rcl1	100	78.877	ENSCGRG00001013748	Rcl1	100	78.877	Cricetulus_griseus_chok1gshd
ENSSFOG00015023020	rcl1	88	80.547	ENSCGRG00000005843	Rcl1	99	80.547	Cricetulus_griseus_crigri
ENSSFOG00015023020	rcl1	100	80.376	ENSCSEG00000000712	rcl1	98	80.376	Cynoglossus_semilaevis
ENSSFOG00015023020	rcl1	100	83.065	ENSCVAG00000011536	rcl1	100	83.065	Cyprinodon_variegatus
ENSSFOG00015023020	rcl1	99	79.292	ENSDARG00000038312	rcl1	100	79.292	Danio_rerio
ENSSFOG00015023020	rcl1	72	79.699	ENSDNOG00000019911	RCL1	100	81.944	Dasypus_novemcinctus
ENSSFOG00015023020	rcl1	99	79.189	ENSDORG00000015645	Rcl1	99	79.189	Dipodomys_ordii
ENSSFOG00015023020	rcl1	98	53.639	FBgn0020909	Rtc1	97	53.908	Drosophila_melanogaster
ENSSFOG00015023020	rcl1	88	54.268	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSSFOG00015023020	rcl1	100	54.960	ENSEBUG00000016621	-	99	54.960	Eptatretus_burgeri
ENSSFOG00015023020	rcl1	100	78.610	ENSEASG00005010653	RCL1	100	78.610	Equus_asinus_asinus
ENSSFOG00015023020	rcl1	100	78.610	ENSECAG00000015973	RCL1	100	78.610	Equus_caballus
ENSSFOG00015023020	rcl1	99	68.108	ENSEEUG00000009801	RCL1	99	68.108	Erinaceus_europaeus
ENSSFOG00015023020	rcl1	100	79.032	ENSELUG00000007353	rcl1	100	79.032	Esox_lucius
ENSSFOG00015023020	rcl1	99	78.649	ENSFCAG00000014557	RCL1	99	78.649	Felis_catus
ENSSFOG00015023020	rcl1	100	70.430	ENSFALG00000010553	RCL1	98	70.430	Ficedula_albicollis
ENSSFOG00015023020	rcl1	88	78.354	ENSFDAG00000004209	RCL1	100	78.354	Fukomys_damarensis
ENSSFOG00015023020	rcl1	100	81.183	ENSFHEG00000011228	rcl1	100	81.183	Fundulus_heteroclitus
ENSSFOG00015023020	rcl1	100	77.957	ENSGMOG00000004677	rcl1	100	77.957	Gadus_morhua
ENSSFOG00015023020	rcl1	99	74.324	ENSGALG00000015024	RCL1	99	74.324	Gallus_gallus
ENSSFOG00015023020	rcl1	100	80.376	ENSGAFG00000007257	rcl1	100	80.376	Gambusia_affinis
ENSSFOG00015023020	rcl1	100	80.108	ENSGACG00000017474	rcl1	100	80.108	Gasterosteus_aculeatus
ENSSFOG00015023020	rcl1	100	77.807	ENSGAGG00000003689	RCL1	100	77.807	Gopherus_agassizii
ENSSFOG00015023020	rcl1	100	78.075	ENSGGOG00000015041	RCL1	100	78.075	Gorilla_gorilla
ENSSFOG00015023020	rcl1	100	81.452	ENSHBUG00000001393	rcl1	100	81.452	Haplochromis_burtoni
ENSSFOG00015023020	rcl1	100	77.807	ENSHGLG00000016452	RCL1	100	77.807	Heterocephalus_glaber_female
ENSSFOG00015023020	rcl1	100	65.775	ENSHGLG00000005368	-	100	65.775	Heterocephalus_glaber_female
ENSSFOG00015023020	rcl1	100	66.578	ENSHGLG00100018010	-	100	66.578	Heterocephalus_glaber_male
ENSSFOG00015023020	rcl1	100	72.995	ENSHGLG00100008718	-	100	72.995	Heterocephalus_glaber_male
ENSSFOG00015023020	rcl1	100	80.108	ENSHCOG00000020170	rcl1	100	80.108	Hippocampus_comes
ENSSFOG00015023020	rcl1	100	82.527	ENSIPUG00000018054	RCL1	100	82.527	Ictalurus_punctatus
ENSSFOG00015023020	rcl1	100	77.807	ENSSTOG00000000023	RCL1	100	77.807	Ictidomys_tridecemlineatus
ENSSFOG00015023020	rcl1	54	61.881	ENSJJAG00000000764	-	98	61.881	Jaculus_jaculus
ENSSFOG00015023020	rcl1	99	71.081	ENSJJAG00000015632	-	99	71.081	Jaculus_jaculus
ENSSFOG00015023020	rcl1	99	79.730	ENSJJAG00000022803	-	99	79.730	Jaculus_jaculus
ENSSFOG00015023020	rcl1	100	80.108	ENSKMAG00000011946	rcl1	100	80.108	Kryptolebias_marmoratus
ENSSFOG00015023020	rcl1	100	76.882	ENSLBEG00000003957	rcl1	100	76.882	Labrus_bergylta
ENSSFOG00015023020	rcl1	92	78.070	ENSLACG00000004594	RCL1	100	81.988	Latimeria_chalumnae
ENSSFOG00015023020	rcl1	100	86.290	ENSLOCG00000010148	rcl1	98	86.290	Lepisosteus_oculatus
ENSSFOG00015023020	rcl1	99	77.838	ENSLAFG00000017495	RCL1	99	77.838	Loxodonta_africana
ENSSFOG00015023020	rcl1	100	78.342	ENSMFAG00000037906	RCL1	100	78.342	Macaca_fascicularis
ENSSFOG00015023020	rcl1	100	78.342	ENSMNEG00000012288	RCL1	100	78.342	Macaca_nemestrina
ENSSFOG00015023020	rcl1	100	78.342	ENSMLEG00000043088	RCL1	100	78.342	Mandrillus_leucophaeus
ENSSFOG00015023020	rcl1	100	81.989	ENSMAMG00000008311	rcl1	100	81.989	Mastacembelus_armatus
ENSSFOG00015023020	rcl1	100	81.183	ENSMZEG00005017292	rcl1	100	81.183	Maylandia_zebra
ENSSFOG00015023020	rcl1	58	74.091	ENSMGAG00000002245	RCL1	100	74.091	Meleagris_gallopavo
ENSSFOG00015023020	rcl1	58	81.944	ENSMAUG00000008922	Rcl1	100	81.944	Mesocricetus_auratus
ENSSFOG00015023020	rcl1	100	78.610	ENSMICG00000015562	RCL1	100	78.610	Microcebus_murinus
ENSSFOG00015023020	rcl1	100	78.877	ENSMOCG00000012145	Rcl1	100	78.877	Microtus_ochrogaster
ENSSFOG00015023020	rcl1	100	79.088	ENSMMOG00000021264	rcl1	100	79.088	Mola_mola
ENSSFOG00015023020	rcl1	95	78.371	ENSMODG00000015377	RCL1	94	78.371	Monodelphis_domestica
ENSSFOG00015023020	rcl1	100	80.914	ENSMALG00000018618	rcl1	100	80.914	Monopterus_albus
ENSSFOG00015023020	rcl1	100	79.144	MGP_CAROLIEiJ_G0022853	Rcl1	100	79.144	Mus_caroli
ENSSFOG00015023020	rcl1	100	78.610	ENSMUSG00000024785	Rcl1	100	78.610	Mus_musculus
ENSSFOG00015023020	rcl1	100	78.610	MGP_PahariEiJ_G0014346	Rcl1	100	80.702	Mus_pahari
ENSSFOG00015023020	rcl1	100	78.610	MGP_SPRETEiJ_G0023771	Rcl1	100	80.117	Mus_spretus
ENSSFOG00015023020	rcl1	100	79.679	ENSMPUG00000004998	RCL1	100	79.679	Mustela_putorius_furo
ENSSFOG00015023020	rcl1	100	78.342	ENSMLUG00000009654	RCL1	100	78.342	Myotis_lucifugus
ENSSFOG00015023020	rcl1	100	78.877	ENSNGAG00000015327	Rcl1	100	78.877	Nannospalax_galili
ENSSFOG00015023020	rcl1	88	79.939	ENSNBRG00000019854	rcl1	96	74.860	Neolamprologus_brichardi
ENSSFOG00015023020	rcl1	100	75.668	ENSNLEG00000008891	RCL1	100	75.668	Nomascus_leucogenys
ENSSFOG00015023020	rcl1	100	72.193	ENSMEUG00000007653	RCL1	100	72.193	Notamacropus_eugenii
ENSSFOG00015023020	rcl1	100	77.807	ENSOPRG00000010965	RCL1	100	77.807	Ochotona_princeps
ENSSFOG00015023020	rcl1	88	66.261	ENSODEG00000004151	RCL1	96	66.261	Octodon_degus
ENSSFOG00015023020	rcl1	100	81.452	ENSONIG00000003871	rcl1	100	81.452	Oreochromis_niloticus
ENSSFOG00015023020	rcl1	66	77.510	ENSOANG00000013193	-	98	77.510	Ornithorhynchus_anatinus
ENSSFOG00015023020	rcl1	100	78.075	ENSOCUG00000008161	RCL1	100	78.075	Oryctolagus_cuniculus
ENSSFOG00015023020	rcl1	100	77.419	ENSORLG00000010443	rcl1	100	77.419	Oryzias_latipes
ENSSFOG00015023020	rcl1	100	77.688	ENSORLG00020012211	rcl1	100	77.688	Oryzias_latipes_hni
ENSSFOG00015023020	rcl1	100	77.151	ENSORLG00015001122	rcl1	100	77.151	Oryzias_latipes_hsok
ENSSFOG00015023020	rcl1	100	79.570	ENSOMEG00000022976	rcl1	88	79.570	Oryzias_melastigma
ENSSFOG00015023020	rcl1	99	78.919	ENSOGAG00000007480	RCL1	99	78.919	Otolemur_garnettii
ENSSFOG00015023020	rcl1	100	77.807	ENSOARG00000013463	RCL1	100	77.807	Ovis_aries
ENSSFOG00015023020	rcl1	100	78.075	ENSPPAG00000037958	RCL1	100	78.075	Pan_paniscus
ENSSFOG00015023020	rcl1	99	77.838	ENSPPRG00000022645	RCL1	99	77.838	Panthera_pardus
ENSSFOG00015023020	rcl1	88	79.817	ENSPTIG00000019031	RCL1	100	81.019	Panthera_tigris_altaica
ENSSFOG00015023020	rcl1	100	77.807	ENSPTRG00000020743	RCL1	97	81.319	Pan_troglodytes
ENSSFOG00015023020	rcl1	100	78.342	ENSPANG00000025151	RCL1	100	78.342	Papio_anubis
ENSSFOG00015023020	rcl1	100	87.634	ENSPKIG00000021022	rcl1	100	87.634	Paramormyrops_kingsleyae
ENSSFOG00015023020	rcl1	88	79.027	ENSPSIG00000012302	RCL1	100	79.027	Pelodiscus_sinensis
ENSSFOG00015023020	rcl1	100	80.108	ENSPMGG00000024007	rcl1	100	80.108	Periophthalmus_magnuspinnatus
ENSSFOG00015023020	rcl1	100	79.412	ENSPEMG00000023275	Rcl1	100	79.412	Peromyscus_maniculatus_bairdii
ENSSFOG00015023020	rcl1	100	78.075	ENSPCIG00000000188	RCL1	100	78.075	Phascolarctos_cinereus
ENSSFOG00015023020	rcl1	100	81.183	ENSPFOG00000019682	rcl1	99	81.183	Poecilia_formosa
ENSSFOG00015023020	rcl1	100	81.183	ENSPLAG00000022354	rcl1	100	81.183	Poecilia_latipinna
ENSSFOG00015023020	rcl1	100	81.183	ENSPMEG00000008131	rcl1	100	81.183	Poecilia_mexicana
ENSSFOG00015023020	rcl1	100	80.645	ENSPREG00000008032	rcl1	100	80.645	Poecilia_reticulata
ENSSFOG00015023020	rcl1	100	78.075	ENSPPYG00000019244	RCL1	100	78.075	Pongo_abelii
ENSSFOG00015023020	rcl1	99	72.162	ENSPCAG00000001440	RCL1	99	72.162	Procavia_capensis
ENSSFOG00015023020	rcl1	100	78.877	ENSPCOG00000009611	RCL1	100	78.877	Propithecus_coquereli
ENSSFOG00015023020	rcl1	100	78.610	ENSPVAG00000015752	RCL1	100	78.610	Pteropus_vampyrus
ENSSFOG00015023020	rcl1	100	81.183	ENSPNYG00000012910	rcl1	100	81.183	Pundamilia_nyererei
ENSSFOG00015023020	rcl1	99	80.163	ENSPNAG00000028307	rcl1	91	80.163	Pygocentrus_nattereri
ENSSFOG00015023020	rcl1	100	78.342	ENSRNOG00000015491	Rcl1	100	78.342	Rattus_norvegicus
ENSSFOG00015023020	rcl1	100	78.075	ENSRBIG00000035818	RCL1	100	78.075	Rhinopithecus_bieti
ENSSFOG00015023020	rcl1	100	78.342	ENSRROG00000029781	RCL1	100	78.342	Rhinopithecus_roxellana
ENSSFOG00015023020	rcl1	98	37.500	YOL010W	-	97	37.500	Saccharomyces_cerevisiae
ENSSFOG00015023020	rcl1	100	78.342	ENSSBOG00000026369	RCL1	97	81.421	Saimiri_boliviensis_boliviensis
ENSSFOG00015023020	rcl1	89	78.550	ENSSHAG00000014086	RCL1	100	78.550	Sarcophilus_harrisii
ENSSFOG00015023020	rcl1	100	81.183	ENSSMAG00000019751	rcl1	86	81.183	Scophthalmus_maximus
ENSSFOG00015023020	rcl1	100	81.720	ENSSDUG00000006349	rcl1	100	81.720	Seriola_dumerili
ENSSFOG00015023020	rcl1	100	82.527	ENSSLDG00000022076	rcl1	100	82.527	Seriola_lalandi_dorsalis
ENSSFOG00015023020	rcl1	100	79.412	ENSSARG00000009260	RCL1	100	79.412	Sorex_araneus
ENSSFOG00015023020	rcl1	99	78.919	ENSSPUG00000016330	RCL1	99	78.919	Sphenodon_punctatus
ENSSFOG00015023020	rcl1	100	81.183	ENSSPAG00000018038	rcl1	100	81.183	Stegastes_partitus
ENSSFOG00015023020	rcl1	100	79.679	ENSSSCG00000005217	RCL1	83	79.679	Sus_scrofa
ENSSFOG00015023020	rcl1	99	74.731	ENSTGUG00000005138	RCL1	99	74.731	Taeniopygia_guttata
ENSSFOG00015023020	rcl1	100	77.419	ENSTRUG00000010493	rcl1	100	77.419	Takifugu_rubripes
ENSSFOG00015023020	rcl1	100	75.538	ENSTNIG00000013214	rcl1	99	75.538	Tetraodon_nigroviridis
ENSSFOG00015023020	rcl1	100	73.797	ENSTBEG00000016339	RCL1	100	73.797	Tupaia_belangeri
ENSSFOG00015023020	rcl1	100	78.075	ENSTTRG00000016525	RCL1	100	78.075	Tursiops_truncatus
ENSSFOG00015023020	rcl1	100	79.947	ENSUAMG00000005598	RCL1	100	82.099	Ursus_americanus
ENSSFOG00015023020	rcl1	88	81.098	ENSUMAG00000017890	RCL1	97	81.098	Ursus_maritimus
ENSSFOG00015023020	rcl1	88	81.402	ENSVPAG00000009188	RCL1	100	81.402	Vicugna_pacos
ENSSFOG00015023020	rcl1	88	81.155	ENSVVUG00000007304	RCL1	89	81.155	Vulpes_vulpes
ENSSFOG00015023020	rcl1	100	72.533	ENSXETG00000000592	rcl1	100	72.533	Xenopus_tropicalis
ENSSFOG00015023020	rcl1	100	81.183	ENSXCOG00000004922	rcl1	100	81.183	Xiphophorus_couchianus
ENSSFOG00015023020	rcl1	100	81.183	ENSXMAG00000022366	RCL1	100	81.183	Xiphophorus_maculatus