EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015023037 (Gene tree)
Gene ID: 108922291
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 18650 bases
Position: chrKV410813.1:1989310-2007959
Accession: 108922291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015036206	TUDOR	PF00567.24	1.3e-75	1	5
ENSSFOP00015036206	TUDOR	PF00567.24	1.3e-75	2	5
ENSSFOP00015036206	TUDOR	PF00567.24	1.3e-75	3	5
ENSSFOP00015036206	TUDOR	PF00567.24	1.3e-75	4	5
ENSSFOP00015036206	TUDOR	PF00567.24	1.3e-75	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036598	-	3591	XM_018732338	ENSSFOP00015036206	1196 (aa)	XP_018587854	-

Gene Model

Click here to download ENSSFOG00015023037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015023037	rnf17	89	32.075	ENSSFOG00015014356	tdrd6	66	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023037	rnf17	90	40.777	ENSG00000132972	RNF17	100	40.385	Homo_sapiens
ENSSFOG00015023037	rnf17	81	43.407	ENSAPOG00000017034	rnf17	74	43.315	Acanthochromis_polyacanthus
ENSSFOG00015023037	rnf17	90	45.506	ENSAMEG00000017340	RNF17	70	45.506	Ailuropoda_melanoleuca
ENSSFOG00015023037	rnf17	89	45.055	ENSAOCG00000018283	rnf17	74	44.801	Amphiprion_ocellaris
ENSSFOG00015023037	rnf17	89	44.711	ENSAPEG00000022338	rnf17	83	45.044	Amphiprion_percula
ENSSFOG00015023037	rnf17	82	44.394	ENSATEG00000002067	rnf17	77	44.394	Anabas_testudineus
ENSSFOG00015023037	rnf17	89	33.855	ENSAPLG00000003969	RNF17	83	33.855	Anas_platyrhynchos
ENSSFOG00015023037	rnf17	89	34.434	ENSACAG00000001418	RNF17	75	34.434	Anolis_carolinensis
ENSSFOG00015023037	rnf17	87	32.983	ENSANAG00000029969	RNF17	95	32.419	Aotus_nancymaae
ENSSFOG00015023037	rnf17	89	43.570	ENSACLG00000018279	rnf17	74	43.570	Astatotilapia_calliptera
ENSSFOG00015023037	rnf17	90	47.277	ENSAMXG00000011002	rnf17	84	47.619	Astyanax_mexicanus
ENSSFOG00015023037	rnf17	56	36.566	ENSBTAG00000000278	RNF17	99	36.566	Bos_taurus
ENSSFOG00015023037	rnf17	89	44.944	ENSCJAG00000018937	RNF17	99	36.551	Callithrix_jacchus
ENSSFOG00015023037	rnf17	86	46.043	ENSCAFG00000007418	RNF17	73	46.043	Canis_familiaris
ENSSFOG00015023037	rnf17	56	36.842	ENSCAFG00020002919	-	99	37.086	Canis_lupus_dingo
ENSSFOG00015023037	rnf17	89	45.625	ENSCHIG00000026716	RNF17	99	36.089	Capra_hircus
ENSSFOG00015023037	rnf17	89	44.767	ENSTSYG00000000365	RNF17	99	35.873	Carlito_syrichta
ENSSFOG00015023037	rnf17	89	31.574	ENSCAPG00000012908	RNF17	89	31.574	Cavia_aperea
ENSSFOG00015023037	rnf17	89	40.777	ENSCCAG00000026725	RNF17	99	36.076	Cebus_capucinus
ENSSFOG00015023037	rnf17	90	41.748	ENSCATG00000040352	RNF17	99	36.032	Cercocebus_atys
ENSSFOG00015023037	rnf17	89	47.500	ENSCLAG00000004127	RNF17	68	48.485	Chinchilla_lanigera
ENSSFOG00015023037	rnf17	90	41.748	ENSCSAG00000018019	RNF17	75	41.748	Chlorocebus_sabaeus
ENSSFOG00015023037	rnf17	89	37.375	ENSCPBG00000020920	RNF17	78	37.375	Chrysemys_picta_bellii
ENSSFOG00015023037	rnf17	90	41.748	ENSCANG00000032927	RNF17	99	36.190	Colobus_angolensis_palliatus
ENSSFOG00015023037	rnf17	89	47.753	ENSCGRG00001022658	Rnf17	69	47.753	Cricetulus_griseus_chok1gshd
ENSSFOG00015023037	rnf17	89	47.753	ENSCGRG00000009924	Rnf17	69	47.753	Cricetulus_griseus_crigri
ENSSFOG00015023037	rnf17	89	43.102	ENSCSEG00000008626	rnf17	81	43.102	Cynoglossus_semilaevis
ENSSFOG00015023037	rnf17	81	41.304	ENSCVAG00000017008	rnf17	83	41.304	Cyprinodon_variegatus
ENSSFOG00015023037	rnf17	89	45.880	ENSDARG00000056387	rnf17	75	45.880	Danio_rerio
ENSSFOG00015023037	rnf17	90	34.311	ENSDNOG00000006115	RNF17	74	34.311	Dasypus_novemcinctus
ENSSFOG00015023037	rnf17	56	36.738	ENSEASG00005001421	-	99	36.738	Equus_asinus_asinus
ENSSFOG00015023037	rnf17	89	45.506	ENSECAG00000017152	RNF17	67	45.506	Equus_caballus
ENSSFOG00015023037	rnf17	65	36.555	ENSEEUG00000000332	RNF17	57	36.555	Erinaceus_europaeus
ENSSFOG00015023037	rnf17	89	49.414	ENSELUG00000005626	rnf17	74	49.414	Esox_lucius
ENSSFOG00015023037	rnf17	90	45.506	ENSFCAG00000004914	RNF17	99	35.987	Felis_catus
ENSSFOG00015023037	rnf17	89	34.651	ENSFALG00000008766	RNF17	79	34.651	Ficedula_albicollis
ENSSFOG00015023037	rnf17	89	46.875	ENSFDAG00000017857	RNF17	68	43.077	Fukomys_damarensis
ENSSFOG00015023037	rnf17	89	43.787	ENSFHEG00000014822	rnf17	74	43.787	Fundulus_heteroclitus
ENSSFOG00015023037	rnf17	58	33.884	ENSGALG00000045414	-	99	33.884	Gallus_gallus
ENSSFOG00015023037	rnf17	88	43.590	ENSGAFG00000004463	rnf17	89	43.810	Gambusia_affinis
ENSSFOG00015023037	rnf17	86	37.253	ENSGAGG00000016999	RNF17	62	37.253	Gopherus_agassizii
ENSSFOG00015023037	rnf17	90	41.262	ENSGGOG00000014491	RNF17	99	36.076	Gorilla_gorilla
ENSSFOG00015023037	rnf17	89	43.570	ENSHBUG00000003554	rnf17	74	43.570	Haplochromis_burtoni
ENSSFOG00015023037	rnf17	89	47.500	ENSHGLG00000007270	RNF17	67	47.093	Heterocephalus_glaber_female
ENSSFOG00015023037	rnf17	89	47.500	ENSHGLG00100017393	RNF17	68	47.093	Heterocephalus_glaber_male
ENSSFOG00015023037	rnf17	89	42.390	ENSHCOG00000017676	rnf17	86	42.390	Hippocampus_comes
ENSSFOG00015023037	rnf17	91	48.340	ENSIPUG00000001087	rnf17	81	48.426	Ictalurus_punctatus
ENSSFOG00015023037	rnf17	89	47.273	ENSJJAG00000016584	Rnf17	68	47.273	Jaculus_jaculus
ENSSFOG00015023037	rnf17	89	43.086	ENSKMAG00000013403	rnf17	73	43.086	Kryptolebias_marmoratus
ENSSFOG00015023037	rnf17	81	44.245	ENSLBEG00000014910	rnf17	73	44.245	Labrus_bergylta
ENSSFOG00015023037	rnf17	82	38.009	ENSLACG00000000323	RNF17	81	38.009	Latimeria_chalumnae
ENSSFOG00015023037	rnf17	89	40.221	ENSLOCG00000010768	rnf17	74	40.221	Lepisosteus_oculatus
ENSSFOG00015023037	rnf17	90	42.233	ENSMFAG00000032388	RNF17	99	36.190	Macaca_fascicularis
ENSSFOG00015023037	rnf17	90	42.233	ENSMMUG00000014610	RNF17	99	36.349	Macaca_mulatta
ENSSFOG00015023037	rnf17	90	42.233	ENSMNEG00000011234	RNF17	99	36.876	Macaca_nemestrina
ENSSFOG00015023037	rnf17	90	41.748	ENSMLEG00000030227	RNF17	74	41.748	Mandrillus_leucophaeus
ENSSFOG00015023037	rnf17	89	45.339	ENSMAMG00000020403	rnf17	87	45.339	Mastacembelus_armatus
ENSSFOG00015023037	rnf17	89	43.655	ENSMZEG00005019166	rnf17	74	43.655	Maylandia_zebra
ENSSFOG00015023037	rnf17	89	33.333	ENSMGAG00000015138	RNF17	96	33.333	Meleagris_gallopavo
ENSSFOG00015023037	rnf17	89	47.753	ENSMAUG00000004788	Rnf17	68	47.753	Mesocricetus_auratus
ENSSFOG00015023037	rnf17	90	42.718	ENSMICG00000010364	RNF17	99	36.551	Microcebus_murinus
ENSSFOG00015023037	rnf17	66	47.191	ENSMOCG00000011818	-	92	47.191	Microtus_ochrogaster
ENSSFOG00015023037	rnf17	89	45.694	ENSMMOG00000019514	rnf17	87	45.576	Mola_mola
ENSSFOG00015023037	rnf17	87	47.879	ENSMODG00000007827	RNF17	72	35.761	Monodelphis_domestica
ENSSFOG00015023037	rnf17	83	41.906	ENSMALG00000016943	rnf17	68	43.360	Monopterus_albus
ENSSFOG00015023037	rnf17	89	35.053	MGP_CAROLIEiJ_G0019337	Rnf17	73	35.294	Mus_caroli
ENSSFOG00015023037	rnf17	89	47.191	ENSMUSG00000000365	Rnf17	69	47.191	Mus_musculus
ENSSFOG00015023037	rnf17	89	35.415	MGP_PahariEiJ_G0030355	Rnf17	73	35.497	Mus_pahari
ENSSFOG00015023037	rnf17	89	47.191	MGP_SPRETEiJ_G0020228	Rnf17	69	47.191	Mus_spretus
ENSSFOG00015023037	rnf17	90	45.506	ENSMPUG00000013305	RNF17	70	45.506	Mustela_putorius_furo
ENSSFOG00015023037	rnf17	90	44.944	ENSMLUG00000003903	RNF17	70	44.944	Myotis_lucifugus
ENSSFOG00015023037	rnf17	89	48.315	ENSNGAG00000013553	Rnf17	69	48.315	Nannospalax_galili
ENSSFOG00015023037	rnf17	91	42.931	ENSNBRG00000012006	rnf17	89	42.931	Neolamprologus_brichardi
ENSSFOG00015023037	rnf17	90	44.382	ENSNLEG00000013780	RNF17	99	35.680	Nomascus_leucogenys
ENSSFOG00015023037	rnf17	60	43.529	ENSOPRG00000016743	-	53	43.529	Ochotona_princeps
ENSSFOG00015023037	rnf17	89	43.570	ENSONIG00000015746	rnf17	99	42.857	Oreochromis_niloticus
ENSSFOG00015023037	rnf17	89	46.067	ENSOCUG00000007384	RNF17	73	46.067	Oryctolagus_cuniculus
ENSSFOG00015023037	rnf17	89	40.932	ENSORLG00000012818	rnf17	85	41.017	Oryzias_latipes
ENSSFOG00015023037	rnf17	89	40.847	ENSORLG00020009879	-	75	40.763	Oryzias_latipes_hni
ENSSFOG00015023037	rnf17	89	41.306	ENSORLG00015013027	-	75	41.137	Oryzias_latipes_hsok
ENSSFOG00015023037	rnf17	80	40.115	ENSOMEG00000009891	rnf17	86	39.849	Oryzias_melastigma
ENSSFOG00015023037	rnf17	90	45.506	ENSOGAG00000014803	RNF17	70	45.506	Otolemur_garnettii
ENSSFOG00015023037	rnf17	89	45.625	ENSOARG00000014641	RNF17	69	45.506	Ovis_aries
ENSSFOG00015023037	rnf17	89	43.820	ENSPPAG00000028779	RNF17	99	35.200	Pan_paniscus
ENSSFOG00015023037	rnf17	90	45.506	ENSPPRG00000009230	RNF17	99	35.987	Panthera_pardus
ENSSFOG00015023037	rnf17	90	45.506	ENSPTIG00000001738	RNF17	99	35.987	Panthera_tigris_altaica
ENSSFOG00015023037	rnf17	90	43.820	ENSPTRG00000005713	RNF17	99	35.200	Pan_troglodytes
ENSSFOG00015023037	rnf17	89	41.748	ENSPANG00000007640	RNF17	99	36.032	Papio_anubis
ENSSFOG00015023037	rnf17	89	52.181	ENSPKIG00000001648	rnf17	90	52.181	Paramormyrops_kingsleyae
ENSSFOG00015023037	rnf17	89	50.610	ENSPSIG00000011245	RNF17	98	50.610	Pelodiscus_sinensis
ENSSFOG00015023037	rnf17	89	47.753	ENSPEMG00000008693	Rnf17	69	47.753	Peromyscus_maniculatus_bairdii
ENSSFOG00015023037	rnf17	84	35.961	ENSPCIG00000009190	-	93	35.934	Phascolarctos_cinereus
ENSSFOG00015023037	rnf17	88	44.332	ENSPFOG00000007124	rnf17	74	44.324	Poecilia_formosa
ENSSFOG00015023037	rnf17	88	45.090	ENSPLAG00000006198	rnf17	74	45.285	Poecilia_latipinna
ENSSFOG00015023037	rnf17	88	45.090	ENSPMEG00000022432	rnf17	76	43.902	Poecilia_mexicana
ENSSFOG00015023037	rnf17	88	46.373	ENSPREG00000001414	rnf17	85	45.808	Poecilia_reticulata
ENSSFOG00015023037	rnf17	90	40.777	ENSPPYG00000005215	RNF17	75	40.777	Pongo_abelii
ENSSFOG00015023037	rnf17	71	32.683	ENSPCOG00000020211	RNF17	65	31.897	Propithecus_coquereli
ENSSFOG00015023037	rnf17	85	48.905	ENSPVAG00000013021	RNF17	68	48.905	Pteropus_vampyrus
ENSSFOG00015023037	rnf17	90	48.879	ENSPNAG00000027505	rnf17	86	48.971	Pygocentrus_nattereri
ENSSFOG00015023037	rnf17	89	47.191	ENSRNOG00000008059	Rnf17	69	47.191	Rattus_norvegicus
ENSSFOG00015023037	rnf17	89	35.413	ENSRBIG00000027010	RNF17	78	35.413	Rhinopithecus_bieti
ENSSFOG00015023037	rnf17	89	44.944	ENSRROG00000022801	RNF17	99	35.771	Rhinopithecus_roxellana
ENSSFOG00015023037	rnf17	89	42.233	ENSSBOG00000021661	RNF17	99	36.967	Saimiri_boliviensis_boliviensis
ENSSFOG00015023037	rnf17	88	46.067	ENSSHAG00000005609	RNF17	73	35.925	Sarcophilus_harrisii
ENSSFOG00015023037	rnf17	81	41.953	ENSSMAG00000007429	rnf17	74	41.953	Scophthalmus_maximus
ENSSFOG00015023037	rnf17	81	43.486	ENSSDUG00000013530	rnf17	77	43.945	Seriola_dumerili
ENSSFOG00015023037	rnf17	81	43.419	ENSSLDG00000019577	rnf17	74	43.905	Seriola_lalandi_dorsalis
ENSSFOG00015023037	rnf17	83	39.863	ENSSARG00000003016	RNF17	62	39.863	Sorex_araneus
ENSSFOG00015023037	rnf17	89	35.726	ENSSPUG00000008917	RNF17	79	37.171	Sphenodon_punctatus
ENSSFOG00015023037	rnf17	80	43.551	ENSSPAG00000001925	rnf17	76	43.779	Stegastes_partitus
ENSSFOG00015023037	rnf17	89	43.137	ENSSSCG00000009572	RNF17	82	43.137	Sus_scrofa
ENSSFOG00015023037	rnf17	70	35.817	ENSTGUG00000011267	-	99	35.817	Taeniopygia_guttata
ENSSFOG00015023037	rnf17	89	42.414	ENSTRUG00000015498	rnf17	77	42.414	Takifugu_rubripes
ENSSFOG00015023037	rnf17	89	41.738	ENSTNIG00000015681	rnf17	99	41.738	Tetraodon_nigroviridis
ENSSFOG00015023037	rnf17	76	42.105	ENSTBEG00000000282	RNF17	61	42.105	Tupaia_belangeri
ENSSFOG00015023037	rnf17	87	46.629	ENSTTRG00000012698	RNF17	71	46.629	Tursiops_truncatus
ENSSFOG00015023037	rnf17	56	37.134	ENSUMAG00000013953	-	99	37.255	Ursus_maritimus
ENSSFOG00015023037	rnf17	90	45.506	ENSVVUG00000006226	RNF17	71	45.506	Vulpes_vulpes
ENSSFOG00015023037	rnf17	82	47.771	ENSXETG00000034020	RNF17	88	47.771	Xenopus_tropicalis
ENSSFOG00015023037	rnf17	80	44.087	ENSXCOG00000018295	rnf17	76	44.256	Xiphophorus_couchianus
ENSSFOG00015023037	rnf17	80	43.312	ENSXMAG00000014747	rnf17	77	43.482	Xiphophorus_maculatus