EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015023063 (Gene tree)
Gene ID: 108935312
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 39502 bases
Position: chrKV410795.1:10774670-10814171
Accession: 108935312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015036283	DNA_pol_A_exo1	PF01612.20	1.3e-19	1	1
ENSSFOP00015036260	DNA_pol_A_exo1	PF01612.20	1.4e-19	1	1
ENSSFOP00015036275	DNA_pol_A_exo1	PF01612.20	1.5e-19	1	1
ENSSFOP00015036250	DNA_pol_A_exo1	PF01612.20	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036653	-	4949	-	ENSSFOP00015036260	867 (aa)	-	-
ENSSFOT00015036676	-	2373	-	ENSSFOP00015036283	790 (aa)	-	-
ENSSFOT00015036642	-	5063	XM_018753819	ENSSFOP00015036250	905 (aa)	XP_018609335	A0A1W5A8P6
ENSSFOT00015036667	-	4871	XM_018753828	ENSSFOP00015036275	841 (aa)	XP_018609344	A0A1W5A0D5

Gene Model

Click here to download ENSSFOG00015023063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023063	exd3	98	41.281	ENSG00000187609	EXD3	96	43.448	Homo_sapiens
ENSSFOG00015023063	exd3	94	54.771	ENSAPOG00000015520	exd3	98	54.771	Acanthochromis_polyacanthus
ENSSFOG00015023063	exd3	99	51.932	ENSACIG00000005561	exd3	94	53.418	Amphilophus_citrinellus
ENSSFOG00015023063	exd3	99	52.299	ENSAOCG00000007721	exd3	97	55.204	Amphiprion_ocellaris
ENSSFOG00015023063	exd3	99	52.414	ENSAPEG00000007019	exd3	98	55.317	Amphiprion_percula
ENSSFOG00015023063	exd3	99	50.751	ENSATEG00000019941	exd3	98	53.265	Anabas_testudineus
ENSSFOG00015023063	exd3	84	47.027	ENSAPLG00000015358	EXD3	99	47.027	Anas_platyrhynchos
ENSSFOG00015023063	exd3	98	40.193	ENSANAG00000019674	EXD3	96	41.928	Aotus_nancymaae
ENSSFOG00015023063	exd3	99	50.058	ENSACLG00000021922	exd3	98	53.265	Astatotilapia_calliptera
ENSSFOG00015023063	exd3	99	53.730	ENSAMXG00000019494	exd3	99	56.751	Astyanax_mexicanus
ENSSFOG00015023063	exd3	99	43.110	ENSBTAG00000023788	EXD3	98	44.678	Bos_taurus
ENSSFOG00015023063	exd3	98	41.727	ENSCJAG00000013170	EXD3	96	43.860	Callithrix_jacchus
ENSSFOG00015023063	exd3	99	42.118	ENSCAFG00000019444	EXD3	98	43.528	Canis_familiaris
ENSSFOG00015023063	exd3	97	41.496	ENSCAFG00020003171	EXD3	91	43.211	Canis_lupus_dingo
ENSSFOG00015023063	exd3	98	42.755	ENSCCAG00000027996	EXD3	96	44.074	Cebus_capucinus
ENSSFOG00015023063	exd3	98	42.217	ENSCSAG00000016661	EXD3	96	43.793	Chlorocebus_sabaeus
ENSSFOG00015023063	exd3	82	47.826	ENSCPBG00000011686	EXD3	89	47.473	Chrysemys_picta_bellii
ENSSFOG00015023063	exd3	82	30.501	ENSCING00000002195	-	84	30.501	Ciona_intestinalis
ENSSFOG00015023063	exd3	57	38.083	ENSCSAVG00000005704	-	97	38.083	Ciona_savignyi
ENSSFOG00015023063	exd3	99	41.784	ENSCANG00000040692	EXD3	97	43.977	Colobus_angolensis_palliatus
ENSSFOG00015023063	exd3	99	50.837	ENSCSEG00000000750	exd3	99	52.655	Cynoglossus_semilaevis
ENSSFOG00015023063	exd3	99	50.289	ENSCVAG00000011560	exd3	98	52.149	Cyprinodon_variegatus
ENSSFOG00015023063	exd3	99	58.243	ENSDARG00000063140	exd3	100	59.328	Danio_rerio
ENSSFOG00015023063	exd3	97	44.970	ENSEASG00005016023	EXD3	96	46.181	Equus_asinus_asinus
ENSSFOG00015023063	exd3	98	45.006	ENSECAG00000017546	EXD3	95	45.930	Equus_caballus
ENSSFOG00015023063	exd3	73	48.010	ENSEEUG00000000405	-	89	44.330	Erinaceus_europaeus
ENSSFOG00015023063	exd3	95	65.116	ENSELUG00000007181	exd3	94	65.116	Esox_lucius
ENSSFOG00015023063	exd3	98	42.566	ENSFCAG00000003579	EXD3	96	43.372	Felis_catus
ENSSFOG00015023063	exd3	94	42.066	ENSFALG00000005132	EXD3	98	44.553	Ficedula_albicollis
ENSSFOG00015023063	exd3	99	49.878	ENSFHEG00000011352	exd3	98	48.958	Fundulus_heteroclitus
ENSSFOG00015023063	exd3	62	38.996	ENSGMOG00000013542	-	99	38.996	Gadus_morhua
ENSSFOG00015023063	exd3	98	41.569	ENSGALG00000052646	EXD3	97	44.178	Gallus_gallus
ENSSFOG00015023063	exd3	99	49.711	ENSGAFG00000007328	exd3	99	52.154	Gambusia_affinis
ENSSFOG00015023063	exd3	84	53.752	ENSGACG00000017442	exd3	100	53.752	Gasterosteus_aculeatus
ENSSFOG00015023063	exd3	84	45.078	ENSGAGG00000011888	EXD3	88	50.325	Gopherus_agassizii
ENSSFOG00015023063	exd3	85	49.180	ENSGGOG00000024724	EXD3	95	48.980	Gorilla_gorilla
ENSSFOG00015023063	exd3	99	50.000	ENSHBUG00000001405	exd3	98	53.379	Haplochromis_burtoni
ENSSFOG00015023063	exd3	94	54.667	ENSHCOG00000020087	exd3	99	50.920	Hippocampus_comes
ENSSFOG00015023063	exd3	99	51.908	ENSIPUG00000020343	exd3	99	53.584	Ictalurus_punctatus
ENSSFOG00015023063	exd3	99	51.498	ENSKMAG00000011881	exd3	98	54.328	Kryptolebias_marmoratus
ENSSFOG00015023063	exd3	94	49.330	ENSLBEG00000004079	exd3	94	51.981	Labrus_bergylta
ENSSFOG00015023063	exd3	99	51.986	ENSLOCG00000002330	exd3	99	54.525	Lepisosteus_oculatus
ENSSFOG00015023063	exd3	85	42.704	ENSLAFG00000001122	EXD3	98	42.704	Loxodonta_africana
ENSSFOG00015023063	exd3	98	41.974	ENSMFAG00000037569	EXD3	96	43.829	Macaca_fascicularis
ENSSFOG00015023063	exd3	98	45.402	ENSMNEG00000033487	EXD3	96	43.599	Macaca_nemestrina
ENSSFOG00015023063	exd3	98	43.866	ENSMLEG00000040548	EXD3	94	43.866	Mandrillus_leucophaeus
ENSSFOG00015023063	exd3	82	59.843	ENSMAMG00000008407	exd3	94	53.776	Mastacembelus_armatus
ENSSFOG00015023063	exd3	99	50.058	ENSMZEG00005017270	exd3	98	53.265	Maylandia_zebra
ENSSFOG00015023063	exd3	84	45.053	ENSMGAG00000001267	EXD3	99	45.053	Meleagris_gallopavo
ENSSFOG00015023063	exd3	97	51.358	ENSMMOG00000021267	exd3	99	53.269	Mola_mola
ENSSFOG00015023063	exd3	62	46.958	ENSMODG00000028091	-	98	47.338	Monodelphis_domestica
ENSSFOG00015023063	exd3	98	49.824	ENSMALG00000018523	exd3	99	51.378	Monopterus_albus
ENSSFOG00015023063	exd3	98	40.952	ENSMPUG00000015130	EXD3	96	42.032	Mustela_putorius_furo
ENSSFOG00015023063	exd3	99	49.822	ENSNBRG00000019734	exd3	99	52.900	Neolamprologus_brichardi
ENSSFOG00015023063	exd3	87	44.079	ENSNLEG00000009095	-	98	44.079	Nomascus_leucogenys
ENSSFOG00015023063	exd3	86	53.191	ENSONIG00000003880	exd3	99	53.191	Oreochromis_niloticus
ENSSFOG00015023063	exd3	84	43.166	ENSOANG00000012485	-	98	43.166	Ornithorhynchus_anatinus
ENSSFOG00015023063	exd3	99	50.521	ENSORLG00000010377	exd3	98	53.592	Oryzias_latipes
ENSSFOG00015023063	exd3	99	50.406	ENSORLG00020012287	exd3	98	53.478	Oryzias_latipes_hni
ENSSFOG00015023063	exd3	99	50.406	ENSORLG00015001156	exd3	99	53.478	Oryzias_latipes_hsok
ENSSFOG00015023063	exd3	99	49.653	ENSOMEG00000023060	exd3	99	52.794	Oryzias_melastigma
ENSSFOG00015023063	exd3	98	41.657	ENSPPAG00000042435	EXD3	96	43.533	Pan_paniscus
ENSSFOG00015023063	exd3	98	42.652	ENSPPRG00000004634	EXD3	96	43.801	Panthera_pardus
ENSSFOG00015023063	exd3	98	41.897	ENSPANG00000026338	EXD3	96	43.468	Papio_anubis
ENSSFOG00015023063	exd3	95	70.514	ENSPKIG00000021103	exd3	99	70.514	Paramormyrops_kingsleyae
ENSSFOG00015023063	exd3	90	44.841	ENSPSIG00000007745	EXD3	92	46.774	Pelodiscus_sinensis
ENSSFOG00015023063	exd3	99	52.091	ENSPMGG00000023999	exd3	99	54.315	Periophthalmus_magnuspinnatus
ENSSFOG00015023063	exd3	67	40.407	ENSPMAG00000006135	-	99	40.407	Petromyzon_marinus
ENSSFOG00015023063	exd3	92	75.000	ENSPCIG00000006180	-	98	46.530	Phascolarctos_cinereus
ENSSFOG00015023063	exd3	99	49.943	ENSPFOG00000019685	exd3	99	52.140	Poecilia_formosa
ENSSFOG00015023063	exd3	87	54.628	ENSPLAG00000022290	exd3	95	54.628	Poecilia_latipinna
ENSSFOG00015023063	exd3	99	51.389	ENSPMEG00000008007	exd3	99	53.584	Poecilia_mexicana
ENSSFOG00015023063	exd3	99	51.101	ENSPREG00000008142	exd3	99	53.075	Poecilia_reticulata
ENSSFOG00015023063	exd3	99	50.058	ENSPNYG00000012849	exd3	98	53.265	Pundamilia_nyererei
ENSSFOG00015023063	exd3	95	58.234	ENSPNAG00000016753	exd3	99	56.962	Pygocentrus_nattereri
ENSSFOG00015023063	exd3	98	41.756	ENSRBIG00000031855	EXD3	97	43.572	Rhinopithecus_bieti
ENSSFOG00015023063	exd3	98	41.408	ENSRROG00000040120	EXD3	96	44.019	Rhinopithecus_roxellana
ENSSFOG00015023063	exd3	98	41.044	ENSSBOG00000022389	EXD3	91	43.038	Saimiri_boliviensis_boliviensis
ENSSFOG00015023063	exd3	84	44.580	ENSSHAG00000001276	-	97	44.370	Sarcophilus_harrisii
ENSSFOG00015023063	exd3	99	49.826	ENSSMAG00000019809	exd3	98	52.500	Scophthalmus_maximus
ENSSFOG00015023063	exd3	87	54.675	ENSSDUG00000006265	exd3	95	54.675	Seriola_dumerili
ENSSFOG00015023063	exd3	93	51.351	ENSSLDG00000004671	exd3	99	54.356	Seriola_lalandi_dorsalis
ENSSFOG00015023063	exd3	99	51.323	ENSSPAG00000017972	exd3	99	53.768	Stegastes_partitus
ENSSFOG00015023063	exd3	93	42.767	ENSSSCG00000005855	EXD3	97	44.390	Sus_scrofa
ENSSFOG00015023063	exd3	84	47.347	ENSTGUG00000002494	EXD3	99	47.347	Taeniopygia_guttata
ENSSFOG00015023063	exd3	92	61.111	ENSTRUG00000010236	exd3	85	61.111	Takifugu_rubripes
ENSSFOG00015023063	exd3	86	51.235	ENSTNIG00000013212	exd3	96	51.235	Tetraodon_nigroviridis
ENSSFOG00015023063	exd3	58	51.351	ENSTTRG00000003815	-	64	51.351	Tursiops_truncatus
ENSSFOG00015023063	exd3	93	41.709	ENSUAMG00000021470	EXD3	98	43.403	Ursus_americanus
ENSSFOG00015023063	exd3	98	41.346	ENSVVUG00000029403	EXD3	93	42.571	Vulpes_vulpes
ENSSFOG00015023063	exd3	91	52.912	ENSXMAG00000001467	exd3	98	52.912	Xiphophorus_maculatus