EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015023123 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 18601 bases
Position: chrKV410820.1:779752-798352
Accession: 108922897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015036366	ResIII	PF04851.15	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036759	-	5037	XM_018733309	ENSSFOP00015036366	1678 (aa)	XP_018588825	-

Gene Model

Click here to download ENSSFOG00015023123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015023123	chd3	95	65.795	ENSSFOG00015002908	chd4	88	74.605
ENSSFOG00015023123	chd3	97	66.286	ENSSFOG00015006296	chd5	87	77.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023123	chd3	98	75.444	ENSG00000170004	CHD3	86	80.727	Homo_sapiens
ENSSFOG00015023123	chd3	92	78.342	ENSAPOG00000005614	chd3	92	84.102	Acanthochromis_polyacanthus
ENSSFOG00015023123	chd3	76	78.754	ENSAMEG00000003025	-	97	78.738	Ailuropoda_melanoleuca
ENSSFOG00015023123	chd3	89	82.591	ENSACIG00000019671	chd3	95	82.194	Amphilophus_citrinellus
ENSSFOG00015023123	chd3	92	88.215	ENSAOCG00000023784	chd3	94	84.022	Amphiprion_ocellaris
ENSSFOG00015023123	chd3	92	88.552	ENSAPEG00000006341	chd3	85	79.848	Amphiprion_percula
ENSSFOG00015023123	chd3	84	93.182	ENSATEG00000000848	chd3	90	92.655	Anabas_testudineus
ENSSFOG00015023123	chd3	98	74.839	ENSACAG00000004276	CHD3	87	73.840	Anolis_carolinensis
ENSSFOG00015023123	chd3	98	74.903	ENSANAG00000034323	CHD3	94	77.659	Aotus_nancymaae
ENSSFOG00015023123	chd3	95	83.714	ENSACLG00000009222	chd3	89	83.284	Astatotilapia_calliptera
ENSSFOG00015023123	chd3	98	74.293	ENSBTAG00000014377	CHD3	88	79.915	Bos_taurus
ENSSFOG00015023123	chd3	98	75.444	ENSCJAG00000014766	CHD3	86	80.727	Callithrix_jacchus
ENSSFOG00015023123	chd3	98	74.935	ENSCAFG00000016859	CHD3	86	80.029	Canis_familiaris
ENSSFOG00015023123	chd3	98	75.796	ENSCAFG00020007422	CHD3	94	80.029	Canis_lupus_dingo
ENSSFOG00015023123	chd3	98	74.870	ENSCHIG00000016737	CHD3	87	79.957	Capra_hircus
ENSSFOG00015023123	chd3	98	75.229	ENSTSYG00000035658	CHD3	94	77.186	Carlito_syrichta
ENSSFOG00015023123	chd3	98	71.558	ENSCAPG00000014864	CHD3	89	71.236	Cavia_aperea
ENSSFOG00015023123	chd3	98	74.596	ENSCPOG00000022653	CHD3	90	74.260	Cavia_porcellus
ENSSFOG00015023123	chd3	98	75.576	ENSCCAG00000034792	CHD3	86	80.157	Cebus_capucinus
ENSSFOG00015023123	chd3	98	75.360	ENSCATG00000041717	CHD3	86	80.727	Cercocebus_atys
ENSSFOG00015023123	chd3	98	75.410	ENSCLAG00000010523	CHD3	88	80.493	Chinchilla_lanigera
ENSSFOG00015023123	chd3	98	74.838	ENSCSAG00000011122	CHD3	88	80.014	Chlorocebus_sabaeus
ENSSFOG00015023123	chd3	92	75.406	ENSCPBG00000011966	CHD3	84	92.517	Chrysemys_picta_bellii
ENSSFOG00015023123	chd3	98	75.360	ENSCANG00000037641	CHD3	94	77.919	Colobus_angolensis_palliatus
ENSSFOG00015023123	chd3	98	75.595	ENSCGRG00001011306	Chd3	88	80.935	Cricetulus_griseus_chok1gshd
ENSSFOG00015023123	chd3	93	68.452	ENSCGRG00000007878	Chd3	85	72.900	Cricetulus_griseus_crigri
ENSSFOG00015023123	chd3	89	92.424	ENSCSEG00000004489	chd3	89	92.424	Cynoglossus_semilaevis
ENSSFOG00015023123	chd3	89	93.534	ENSCVAG00000007293	chd3	91	81.495	Cyprinodon_variegatus
ENSSFOG00015023123	chd3	95	86.854	ENSDARG00000021405	chd3	87	94.615	Danio_rerio
ENSSFOG00015023123	chd3	85	75.654	ENSDNOG00000047846	CHD3	78	75.879	Dasypus_novemcinctus
ENSSFOG00015023123	chd3	98	75.912	ENSDORG00000010713	Chd3	88	81.259	Dipodomys_ordii
ENSSFOG00015023123	chd3	95	76.676	ENSETEG00000017733	CHD3	88	76.731	Echinops_telfairi
ENSSFOG00015023123	chd3	82	67.731	ENSEBUG00000008310	chd3	93	69.327	Eptatretus_burgeri
ENSSFOG00015023123	chd3	98	74.741	ENSEASG00005019360	CHD3	94	80.029	Equus_asinus_asinus
ENSSFOG00015023123	chd3	98	74.806	ENSECAG00000010051	CHD3	94	80.100	Equus_caballus
ENSSFOG00015023123	chd3	83	90.816	ENSEEUG00000015205	CHD3	74	90.816	Erinaceus_europaeus
ENSSFOG00015023123	chd3	83	97.279	ENSELUG00000019499	chd3	95	97.279	Esox_lucius
ENSSFOG00015023123	chd3	98	74.627	ENSFCAG00000009629	CHD3	84	79.685	Felis_catus
ENSSFOG00015023123	chd3	98	74.661	ENSFDAG00000008220	CHD3	91	74.324	Fukomys_damarensis
ENSSFOG00015023123	chd3	89	83.456	ENSGMOG00000013599	chd3	83	83.825	Gadus_morhua
ENSSFOG00015023123	chd3	58	76.471	ENSGAFG00000004055	chd3	85	87.870	Gambusia_affinis
ENSSFOG00015023123	chd3	97	75.670	ENSGACG00000019275	chd3	90	81.792	Gasterosteus_aculeatus
ENSSFOG00015023123	chd3	82	73.439	ENSGAGG00000013164	CHD3	90	87.017	Gopherus_agassizii
ENSSFOG00015023123	chd3	98	75.510	ENSGGOG00000013496	CHD3	94	77.849	Gorilla_gorilla
ENSSFOG00015023123	chd3	98	75.844	ENSHGLG00000012017	CHD3	87	79.743	Heterocephalus_glaber_female
ENSSFOG00015023123	chd3	85	67.416	ENSHGLG00100013902	CHD3	86	72.213	Heterocephalus_glaber_male
ENSSFOG00015023123	chd3	94	79.873	ENSHCOG00000010170	chd3	80	86.293	Hippocampus_comes
ENSSFOG00015023123	chd3	97	82.897	ENSIPUG00000003271	chd3	93	82.751	Ictalurus_punctatus
ENSSFOG00015023123	chd3	98	75.541	ENSSTOG00000025907	CHD3	88	80.811	Ictidomys_tridecemlineatus
ENSSFOG00015023123	chd3	98	75.229	ENSJJAG00000017633	Chd3	88	80.582	Jaculus_jaculus
ENSSFOG00015023123	chd3	86	97.525	ENSKMAG00000019292	chd3	89	82.583	Kryptolebias_marmoratus
ENSSFOG00015023123	chd3	95	74.019	ENSLBEG00000028485	chd3	84	79.607	Labrus_bergylta
ENSSFOG00015023123	chd3	98	69.981	ENSLACG00000008031	CHD3	92	70.284	Latimeria_chalumnae
ENSSFOG00015023123	chd3	91	76.147	ENSLAFG00000000572	CHD3	88	78.775	Loxodonta_africana
ENSSFOG00015023123	chd3	98	73.401	ENSMFAG00000020113	CHD3	94	78.766	Macaca_fascicularis
ENSSFOG00015023123	chd3	98	73.099	ENSMMUG00000022221	CHD3	86	78.781	Macaca_mulatta
ENSSFOG00015023123	chd3	98	75.426	ENSMNEG00000001728	CHD3	94	80.344	Macaca_nemestrina
ENSSFOG00015023123	chd3	98	75.360	ENSMLEG00000032249	CHD3	86	80.727	Mandrillus_leucophaeus
ENSSFOG00015023123	chd3	89	83.622	ENSMAMG00000000564	chd3	90	92.818	Mastacembelus_armatus
ENSSFOG00015023123	chd3	98	75.595	ENSMAUG00000013873	Chd3	94	77.897	Mesocricetus_auratus
ENSSFOG00015023123	chd3	98	75.549	ENSMICG00000008741	CHD3	90	74.164	Microcebus_murinus
ENSSFOG00015023123	chd3	98	75.595	ENSMOCG00000004848	Chd3	88	80.935	Microtus_ochrogaster
ENSSFOG00015023123	chd3	95	83.577	ENSMMOG00000012699	chd3	91	83.056	Mola_mola
ENSSFOG00015023123	chd3	98	74.034	ENSMODG00000007509	CHD3	94	81.213	Monodelphis_domestica
ENSSFOG00015023123	chd3	98	75.513	MGP_CAROLIEiJ_G0016564	Chd3	90	80.893	Mus_caroli
ENSSFOG00015023123	chd3	98	75.595	ENSMUSG00000018474	Chd3	90	80.406	Mus_musculus
ENSSFOG00015023123	chd3	98	75.661	MGP_PahariEiJ_G0017695	Chd3	90	80.479	Mus_pahari
ENSSFOG00015023123	chd3	98	75.595	MGP_SPRETEiJ_G0017400	Chd3	90	80.406	Mus_spretus
ENSSFOG00015023123	chd3	93	74.229	ENSMPUG00000008861	CHD3	94	79.971	Mustela_putorius_furo
ENSSFOG00015023123	chd3	98	75.405	ENSMLUG00000014643	-	86	80.171	Myotis_lucifugus
ENSSFOG00015023123	chd3	98	74.725	ENSNGAG00000000773	Chd3	86	79.815	Nannospalax_galili
ENSSFOG00015023123	chd3	90	85.567	ENSNBRG00000000636	chd3	94	83.916	Neolamprologus_brichardi
ENSSFOG00015023123	chd3	98	72.434	ENSNLEG00000009770	CHD3	88	78.781	Nomascus_leucogenys
ENSSFOG00015023123	chd3	81	83.824	ENSMEUG00000005852	CHD3	73	83.824	Notamacropus_eugenii
ENSSFOG00015023123	chd3	98	73.579	ENSOPRG00000011069	CHD3	92	78.699	Ochotona_princeps
ENSSFOG00015023123	chd3	98	74.790	ENSODEG00000017785	CHD3	87	79.743	Octodon_degus
ENSSFOG00015023123	chd3	95	83.797	ENSONIG00000009292	chd3	90	83.063	Oreochromis_niloticus
ENSSFOG00015023123	chd3	98	70.962	ENSOCUG00000029299	CHD3	92	71.346	Oryctolagus_cuniculus
ENSSFOG00015023123	chd3	81	79.732	ENSORLG00000007107	chd3	84	79.964	Oryzias_latipes
ENSSFOG00015023123	chd3	53	90.063	ENSORLG00020008387	chd3	81	90.063	Oryzias_latipes_hni
ENSSFOG00015023123	chd3	90	83.307	ENSOMEG00000013691	chd3	95	83.846	Oryzias_melastigma
ENSSFOG00015023123	chd3	98	72.712	ENSOGAG00000003216	CHD3	88	79.743	Otolemur_garnettii
ENSSFOG00015023123	chd3	98	73.603	ENSOARG00000017855	CHD3	86	79.288	Ovis_aries
ENSSFOG00015023123	chd3	98	73.124	ENSPPAG00000032886	CHD3	94	77.786	Pan_paniscus
ENSSFOG00015023123	chd3	98	75.928	ENSPPRG00000000626	CHD3	86	81.200	Panthera_pardus
ENSSFOG00015023123	chd3	98	75.444	ENSPTRG00000008714	CHD3	94	77.919	Pan_troglodytes
ENSSFOG00015023123	chd3	98	74.838	ENSPANG00000023938	CHD3	94	78.766	Papio_anubis
ENSSFOG00015023123	chd3	94	88.962	ENSPKIG00000006305	chd3	88	96.429	Paramormyrops_kingsleyae
ENSSFOG00015023123	chd3	60	78.358	ENSPSIG00000010177	CHD3	91	87.814	Pelodiscus_sinensis
ENSSFOG00015023123	chd3	98	74.661	ENSPEMG00000014262	Chd3	87	79.657	Peromyscus_maniculatus_bairdii
ENSSFOG00015023123	chd3	98	74.036	ENSPCIG00000005442	CHD3	88	88.839	Phascolarctos_cinereus
ENSSFOG00015023123	chd3	95	80.511	ENSPFOG00000012464	chd3	80	87.016	Poecilia_formosa
ENSSFOG00015023123	chd3	88	95.259	ENSPLAG00000002887	chd3	88	80.015	Poecilia_latipinna
ENSSFOG00015023123	chd3	55	67.178	ENSPMEG00000016725	chd3	77	89.206	Poecilia_mexicana
ENSSFOG00015023123	chd3	98	79.025	ENSPREG00000011044	chd3	88	85.283	Poecilia_reticulata
ENSSFOG00015023123	chd3	98	72.169	ENSPPYG00000007940	CHD3	88	78.410	Pongo_abelii
ENSSFOG00015023123	chd3	91	79.458	ENSPCAG00000004350	CHD3	84	79.669	Procavia_capensis
ENSSFOG00015023123	chd3	98	74.837	ENSPCOG00000020952	CHD3	87	79.886	Propithecus_coquereli
ENSSFOG00015023123	chd3	82	72.231	ENSPVAG00000016344	CHD3	75	85.135	Pteropus_vampyrus
ENSSFOG00015023123	chd3	95	93.141	ENSPNAG00000020393	chd3	96	90.810	Pygocentrus_nattereri
ENSSFOG00015023123	chd3	98	74.855	ENSRNOG00000009722	Chd3	98	74.694	Rattus_norvegicus
ENSSFOG00015023123	chd3	98	74.984	ENSRBIG00000033562	CHD3	94	79.476	Rhinopithecus_bieti
ENSSFOG00015023123	chd3	98	75.360	ENSRROG00000029554	CHD3	94	79.140	Rhinopithecus_roxellana
ENSSFOG00015023123	chd3	98	75.661	ENSSBOG00000020719	CHD3	94	80.273	Saimiri_boliviensis_boliviensis
ENSSFOG00015023123	chd3	98	73.188	ENSSHAG00000014412	CHD3	88	81.140	Sarcophilus_harrisii
ENSSFOG00015023123	chd3	97	76.374	ENSSMAG00000006451	chd3	95	84.194	Scophthalmus_maximus
ENSSFOG00015023123	chd3	51	90.532	ENSSDUG00000005792	chd3	81	90.532	Seriola_dumerili
ENSSFOG00015023123	chd3	95	88.594	ENSSPAG00000013694	chd3	94	83.227	Stegastes_partitus
ENSSFOG00015023123	chd3	98	74.341	ENSSSCG00000021363	CHD3	95	80.230	Sus_scrofa
ENSSFOG00015023123	chd3	74	86.913	ENSTRUG00000014990	chd3	79	86.913	Takifugu_rubripes
ENSSFOG00015023123	chd3	95	84.207	ENSTNIG00000012998	chd3	88	84.012	Tetraodon_nigroviridis
ENSSFOG00015023123	chd3	64	90.816	ENSTBEG00000011454	-	62	90.816	Tupaia_belangeri
ENSSFOG00015023123	chd3	96	74.676	ENSTTRG00000010295	CHD3	87	74.389	Tursiops_truncatus
ENSSFOG00015023123	chd3	97	73.885	ENSUAMG00000005475	CHD3	94	78.790	Ursus_americanus
ENSSFOG00015023123	chd3	53	90.402	ENSVPAG00000010794	-	57	95.918	Vicugna_pacos
ENSSFOG00015023123	chd3	98	74.935	ENSVVUG00000028011	CHD3	91	80.029	Vulpes_vulpes
ENSSFOG00015023123	chd3	98	68.462	ENSXETG00000012991	chd3	88	68.045	Xenopus_tropicalis
ENSSFOG00015023123	chd3	50	89.053	ENSXCOG00000000809	chd3	79	89.053	Xiphophorus_couchianus
ENSSFOG00015023123	chd3	86	94.915	ENSXMAG00000016035	chd3	95	94.915	Xiphophorus_maculatus