EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015023199 (Gene tree)
Gene ID: 108923081
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 14778 bases
Position: chrKV410820.1:886484-901261
Accession: 108923081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	1	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	2	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	3	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	4	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	5	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	6	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	7	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	8	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	9	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	10	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	11	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	12	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	13	14
ENSSFOP00015036511	KH_1	PF00013.29	1.4e-190	14	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	1	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	2	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	3	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	4	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	5	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	6	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	7	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	8	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	9	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	10	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	11	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	12	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	13	14
ENSSFOP00015036496	KH_1	PF00013.29	2.1e-190	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015036889	-	5990	-	ENSSFOP00015036496	1287 (aa)	-	-
ENSSFOT00015036905	-	5909	XM_018733570	ENSSFOP00015036511	1260 (aa)	XP_018589086	A0A1W4YLB8

Gene Model

Click here to download ENSSFOG00015023199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015023199	hdlbpb	100	71.855	ENSSFOG00015018627	hdlbp	100	71.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023199	hdlbpb	100	88.328	ENSAPOG00000006904	hdlbpb	100	88.328	Acanthochromis_polyacanthus
ENSSFOG00015023199	hdlbpb	100	84.609	ENSACIG00000016154	hdlbpb	100	84.688	Amphilophus_citrinellus
ENSSFOG00015023199	hdlbpb	100	88.644	ENSAOCG00000004083	hdlbpb	100	88.644	Amphiprion_ocellaris
ENSSFOG00015023199	hdlbpb	100	88.565	ENSAPEG00000012270	hdlbpb	100	88.565	Amphiprion_percula
ENSSFOG00015023199	hdlbpb	100	87.855	ENSATEG00000019877	hdlbpb	100	87.855	Anabas_testudineus
ENSSFOG00015023199	hdlbpb	100	82.857	ENSACAG00000003606	-	100	82.857	Anolis_carolinensis
ENSSFOG00015023199	hdlbpb	100	88.091	ENSACLG00000006618	hdlbpb	100	88.091	Astatotilapia_calliptera
ENSSFOG00015023199	hdlbpb	100	78.881	ENSAMXG00000019946	hdlbpb	100	78.881	Astyanax_mexicanus
ENSSFOG00015023199	hdlbpb	100	87.293	ENSCSEG00000000955	hdlbpb	100	87.435	Cynoglossus_semilaevis
ENSSFOG00015023199	hdlbpb	100	88.364	ENSCVAG00000005345	hdlbpb	100	88.364	Cyprinodon_variegatus
ENSSFOG00015023199	hdlbpb	99	85.895	ENSDARG00000061864	hdlbpb	99	85.895	Danio_rerio
ENSSFOG00015023199	hdlbpb	93	70.709	ENSEBUG00000005304	hdlbpb	98	70.092	Eptatretus_burgeri
ENSSFOG00015023199	hdlbpb	100	77.183	ENSELUG00000019925	hdlbpb	100	77.183	Esox_lucius
ENSSFOG00015023199	hdlbpb	87	33.473	ENSFHEG00000001701	hdlbpb	100	82.794	Fundulus_heteroclitus
ENSSFOG00015023199	hdlbpb	96	85.308	ENSGMOG00000004522	hdlbpb	79	85.308	Gadus_morhua
ENSSFOG00015023199	hdlbpb	100	87.539	ENSGAFG00000005278	hdlbpb	100	87.539	Gambusia_affinis
ENSSFOG00015023199	hdlbpb	99	85.308	ENSGACG00000019361	hdlbpb	100	85.387	Gasterosteus_aculeatus
ENSSFOG00015023199	hdlbpb	100	87.934	ENSHBUG00000018434	hdlbpb	100	87.934	Haplochromis_burtoni
ENSSFOG00015023199	hdlbpb	100	85.387	ENSIPUG00000003291	HDLBP	100	85.590	Ictalurus_punctatus
ENSSFOG00015023199	hdlbpb	100	87.461	ENSKMAG00000016562	hdlbpb	100	87.461	Kryptolebias_marmoratus
ENSSFOG00015023199	hdlbpb	100	87.461	ENSLBEG00000027855	hdlbpb	100	87.461	Labrus_bergylta
ENSSFOG00015023199	hdlbpb	100	84.598	ENSLACG00000007661	hdlbpb	90	84.598	Latimeria_chalumnae
ENSSFOG00015023199	hdlbpb	100	84.536	ENSLOCG00000013909	hdlbpb	100	84.536	Lepisosteus_oculatus
ENSSFOG00015023199	hdlbpb	100	87.855	ENSMAMG00000003035	hdlbpb	100	87.855	Mastacembelus_armatus
ENSSFOG00015023199	hdlbpb	100	88.091	ENSMZEG00005021465	hdlbpb	100	88.091	Maylandia_zebra
ENSSFOG00015023199	hdlbpb	100	87.204	ENSMMOG00000012525	hdlbpb	100	87.283	Mola_mola
ENSSFOG00015023199	hdlbpb	100	85.962	ENSMALG00000008938	hdlbpb	100	85.962	Monopterus_albus
ENSSFOG00015023199	hdlbpb	100	88.091	ENSNBRG00000002236	hdlbpb	100	88.091	Neolamprologus_brichardi
ENSSFOG00015023199	hdlbpb	100	87.855	ENSONIG00000009211	hdlbpb	100	87.855	Oreochromis_niloticus
ENSSFOG00015023199	hdlbpb	100	87.342	ENSORLG00000006581	hdlbpb	100	86.977	Oryzias_latipes
ENSSFOG00015023199	hdlbpb	100	87.056	ENSORLG00020010012	hdlbpb	100	87.135	Oryzias_latipes_hni
ENSSFOG00015023199	hdlbpb	100	87.135	ENSORLG00015006863	hdlbpb	100	87.214	Oryzias_latipes_hsok
ENSSFOG00015023199	hdlbpb	100	87.135	ENSOMEG00000011131	hdlbpb	100	87.214	Oryzias_melastigma
ENSSFOG00015023199	hdlbpb	100	93.254	ENSPKIG00000005966	hdlbpb	100	93.254	Paramormyrops_kingsleyae
ENSSFOG00015023199	hdlbpb	93	88.611	ENSPMGG00000019853	hdlbpb	99	88.611	Periophthalmus_magnuspinnatus
ENSSFOG00015023199	hdlbpb	94	75.082	ENSPMAG00000002131	hdlbpb	100	75.082	Petromyzon_marinus
ENSSFOG00015023199	hdlbpb	92	66.216	ENSPMAG00000000249	-	99	66.558	Petromyzon_marinus
ENSSFOG00015023199	hdlbpb	100	86.817	ENSPFOG00000008755	hdlbpb	100	86.817	Poecilia_formosa
ENSSFOG00015023199	hdlbpb	100	87.855	ENSPLAG00000007055	hdlbpb	100	87.855	Poecilia_latipinna
ENSSFOG00015023199	hdlbpb	100	87.697	ENSPMEG00000001952	hdlbpb	100	87.697	Poecilia_mexicana
ENSSFOG00015023199	hdlbpb	100	87.934	ENSPREG00000012848	hdlbpb	100	87.934	Poecilia_reticulata
ENSSFOG00015023199	hdlbpb	100	88.161	ENSPNYG00000022467	hdlbpb	100	88.161	Pundamilia_nyererei
ENSSFOG00015023199	hdlbpb	100	89.074	ENSPNAG00000011104	hdlbpb	100	89.074	Pygocentrus_nattereri
ENSSFOG00015023199	hdlbpb	100	88.249	ENSSMAG00000008790	hdlbpb	100	88.249	Scophthalmus_maximus
ENSSFOG00015023199	hdlbpb	100	88.319	ENSSDUG00000020694	hdlbpb	100	88.319	Seriola_dumerili
ENSSFOG00015023199	hdlbpb	100	88.003	ENSSLDG00000020807	hdlbpb	100	88.003	Seriola_lalandi_dorsalis
ENSSFOG00015023199	hdlbpb	100	83.333	ENSSPUG00000018688	-	100	83.333	Sphenodon_punctatus
ENSSFOG00015023199	hdlbpb	100	88.249	ENSSPAG00000016969	hdlbpb	100	88.249	Stegastes_partitus
ENSSFOG00015023199	hdlbpb	98	84.949	ENSTRUG00000012888	hdlbpb	99	84.901	Takifugu_rubripes
ENSSFOG00015023199	hdlbpb	99	85.435	ENSTNIG00000002555	hdlbpb	100	85.435	Tetraodon_nigroviridis
ENSSFOG00015023199	hdlbpb	100	78.973	ENSXCOG00000001797	hdlbpb	100	78.973	Xiphophorus_couchianus
ENSSFOG00015023199	hdlbpb	100	87.618	ENSXMAG00000015633	hdlbpb	100	87.618	Xiphophorus_maculatus