EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015023260 (Gene tree)
Gene ID
108940034
Gene Symbol
rbfox3a
Alias
rbfox3
Full Name
RNA binding protein fox-1 homolog 3
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
328323 bases
Position
chrKV411197.1:3279607-3607929
Accession
108940034
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015036619Fox-1_CPF12414.89.8e-4611
ENSSFOP00015036590Fox-1_CPF12414.81.2e-4511
ENSSFOP00015036628Fox-1_CPF12414.81.3e-4511
ENSSFOP00015036570Fox-1_CPF12414.81.4e-4511
ENSSFOP00015036582Fox-1_CPF12414.81.5e-4511
ENSSFOP00015036590RRM_1PF00076.221.1e-1811
ENSSFOP00015036570RRM_1PF00076.222.2e-1811
ENSSFOP00015036582RRM_1PF00076.222.3e-1811
ENSSFOP00015036619RRM_1PF00076.220.0002311
ENSSFOP00015036628RRM_1PF00076.220.0002711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015036977-2153-ENSSFOP00015036582376 (aa)--
ENSSFOT00015037013-3152XM_018761820ENSSFOP00015036619301 (aa)XP_018617336-
ENSSFOT00015037022-3344XM_018761817ENSSFOP00015036628337 (aa)XP_018617333-
ENSSFOT00015036964-4050XM_018761818ENSSFOP00015036570369 (aa)XP_018617334A0A1W5ANW9
ENSSFOT00015036984-2092XM_018761812ENSSFOP00015036590383 (aa)XP_018617328A0A1W5ANX5
Gene Model
Click here to download ENSSFOG00015023260's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023260's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015023260rbfox3a9954.683ENSSFOG00015023675rbfox19856.183
ENSSFOG00015023260rbfox3a9971.569ENSSFOG00015004716RBFOX310072.549
ENSSFOG00015023260rbfox3a9664.624ENSSFOG00015009955-9263.957
ENSSFOG00015023260rbfox3a6966.124ENSSFOG00015010482-8262.987
ENSSFOG00015023260rbfox3a8462.840ENSSFOG00015000675rbfox1l8462.187
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015023260rbfox3a8185.714ENSG00000167281RBFOX39993.333Homo_sapiens
ENSSFOG00015023260rbfox3a10088.402ENSAPOG00000021630rbfox3b10087.113Acanthochromis_polyacanthus
ENSSFOG00015023260rbfox3a10065.583ENSAPOG00000015658-8472.393Acanthochromis_polyacanthus
ENSSFOG00015023260rbfox3a9873.623ENSAMEG00000014170RBFOX39874.935Ailuropoda_melanoleuca
ENSSFOG00015023260rbfox3a8586.349ENSACIG00000010817rbfox3b9583.828Amphilophus_citrinellus
ENSSFOG00015023260rbfox3a8871.470ENSACIG00000003768-9074.618Amphilophus_citrinellus
ENSSFOG00015023260rbfox3a10087.968ENSAOCG00000012358rbfox3b10086.631Amphiprion_ocellaris
ENSSFOG00015023260rbfox3a10076.630ENSAOCG00000010786-9579.387Amphiprion_ocellaris
ENSSFOG00015023260rbfox3a10069.209ENSAPEG00000015891-9374.734Amphiprion_percula
ENSSFOG00015023260rbfox3a9775.698ENSAPEG00000019081rbfox3b9774.238Amphiprion_percula
ENSSFOG00015023260rbfox3a9472.468ENSATEG00000023101-9381.250Anabas_testudineus
ENSSFOG00015023260rbfox3a9471.304ENSATEG00000019945rbfox3b9680.480Anabas_testudineus
ENSSFOG00015023260rbfox3a9876.243ENSACAG00000016093RBFOX39978.830Anolis_carolinensis
ENSSFOG00015023260rbfox3a8185.382ENSANAG00000023457RBFOX39583.056Aotus_nancymaae
ENSSFOG00015023260rbfox3a10088.144ENSACLG00000020011rbfox3b10086.856Astatotilapia_calliptera
ENSSFOG00015023260rbfox3a10086.350ENSACLG00000025552-9686.350Astatotilapia_calliptera
ENSSFOG00015023260rbfox3a9976.882ENSAMXG00000042841rbfox3b10075.493Astyanax_mexicanus
ENSSFOG00015023260rbfox3a10091.512ENSAMXG00000037246rbfox3a9991.316Astyanax_mexicanus
ENSSFOG00015023260rbfox3a8970.978ENSBTAG00000006280RBFOX39569.716Bos_taurus
ENSSFOG00015023260rbfox3a8970.662ENSCJAG00000009563RBFOX39671.552Callithrix_jacchus
ENSSFOG00015023260rbfox3a6690.909ENSCAFG00000005547RBFOX310079.859Canis_familiaris
ENSSFOG00015023260rbfox3a8970.662ENSCAFG00020008126RBFOX39672.652Canis_lupus_dingo
ENSSFOG00015023260rbfox3a8970.662ENSCHIG00000009124RBFOX39672.652Capra_hircus
ENSSFOG00015023260rbfox3a8971.924ENSTSYG00000029617RBFOX39674.713Carlito_syrichta
ENSSFOG00015023260rbfox3a8970.219ENSCPOG00000021703RBFOX39673.626Cavia_porcellus
ENSSFOG00015023260rbfox3a8185.382ENSCCAG00000028450RBFOX39583.056Cebus_capucinus
ENSSFOG00015023260rbfox3a8185.714ENSCATG00000018349RBFOX39583.389Cercocebus_atys
ENSSFOG00015023260rbfox3a8970.978ENSCLAG00000006449RBFOX39674.862Chinchilla_lanigera
ENSSFOG00015023260rbfox3a8185.714ENSCSAG00000002355RBFOX39583.389Chlorocebus_sabaeus
ENSSFOG00015023260rbfox3a10076.506ENSCPBG00000010904RBFOX39885.000Chrysemys_picta_bellii
ENSSFOG00015023260rbfox3a8185.714ENSCANG00000043120RBFOX39583.389Colobus_angolensis_palliatus
ENSSFOG00015023260rbfox3a8968.553ENSCGRG00001019476Rbfox39672.727Cricetulus_griseus_chok1gshd
ENSSFOG00015023260rbfox3a8968.553ENSCGRG00000003268Rbfox39672.727Cricetulus_griseus_crigri
ENSSFOG00015023260rbfox3a10063.612ENSCSEG00000020606RBFOX310061.725Cynoglossus_semilaevis
ENSSFOG00015023260rbfox3a9885.286ENSCSEG00000015567RBFOX39884.636Cynoglossus_semilaevis
ENSSFOG00015023260rbfox3a10087.968ENSCVAG00000006882rbfox3b10086.631Cyprinodon_variegatus
ENSSFOG00015023260rbfox3a10090.716ENSDARG00000010083rbfox3a10090.981Danio_rerio
ENSSFOG00015023260rbfox3a10075.828ENSDARG00000074310rbfox3b9687.565Danio_rerio
ENSSFOG00015023260rbfox3a7071.242ENSDNOG00000039391RBFOX36493.443Dasypus_novemcinctus
ENSSFOG00015023260rbfox3a8958.861ENSDORG00000005352Rbfox39664.266Dipodomys_ordii
ENSSFOG00015023260rbfox3a8254.982ENSEBUG00000013559RBFOX37160.853Eptatretus_burgeri
ENSSFOG00015023260rbfox3a8971.751ENSEBUG00000002129RBFOX39972.034Eptatretus_burgeri
ENSSFOG00015023260rbfox3a8183.775ENSEASG00005005059RBFOX39583.775Equus_asinus_asinus
ENSSFOG00015023260rbfox3a8183.444ENSECAG00000023811RBFOX39583.444Equus_caballus
ENSSFOG00015023260rbfox3a7884.507ENSEEUG00000013974RBFOX37293.333Erinaceus_europaeus
ENSSFOG00015023260rbfox3a10086.598ENSELUG00000017963rbfox3b10084.536Esox_lucius
ENSSFOG00015023260rbfox3a9876.519ENSFCAG00000002555RBFOX39583.175Felis_catus
ENSSFOG00015023260rbfox3a9071.233ENSFALG00000012288RBFOX39966.995Ficedula_albicollis
ENSSFOG00015023260rbfox3a8964.577ENSFDAG00000007489RBFOX39668.132Fukomys_damarensis
ENSSFOG00015023260rbfox3a9489.789ENSFHEG00000008550rbfox3b9587.732Fundulus_heteroclitus
ENSSFOG00015023260rbfox3a8667.905ENSGMOG00000019304-9969.970Gadus_morhua
ENSSFOG00015023260rbfox3a9886.780ENSGALG00000032889RBFOX39980.337Gallus_gallus
ENSSFOG00015023260rbfox3a10081.551ENSGAFG00000005025rbfox3b10080.481Gambusia_affinis
ENSSFOG00015023260rbfox3a8274.380ENSGACG00000002138-9675.482Gasterosteus_aculeatus
ENSSFOG00015023260rbfox3a9983.502ENSGAGG00000020025RBFOX39885.000Gopherus_agassizii
ENSSFOG00015023260rbfox3a8185.714ENSGGOG00000012546RBFOX39583.389Gorilla_gorilla
ENSSFOG00015023260rbfox3a9186.744ENSHBUG00000023098-9986.744Haplochromis_burtoni
ENSSFOG00015023260rbfox3a10088.144ENSHBUG00000018099rbfox3b10086.856Haplochromis_burtoni
ENSSFOG00015023260rbfox3a8970.093ENSHGLG00000008679RBFOX39672.678Heterocephalus_glaber_female
ENSSFOG00015023260rbfox3a8965.421ENSHGLG00100014739RBFOX39669.945Heterocephalus_glaber_male
ENSSFOG00015023260rbfox3a9874.590ENSHCOG00000007444RBFOX39474.124Hippocampus_comes
ENSSFOG00015023260rbfox3a8578.413ENSHCOG00000001863RBFOX38975.410Hippocampus_comes
ENSSFOG00015023260rbfox3a9460.231ENSIPUG00000021966rbfox3b9880.377Ictalurus_punctatus
ENSSFOG00015023260rbfox3a10089.514ENSIPUG00000012010rbfox3a10089.770Ictalurus_punctatus
ENSSFOG00015023260rbfox3a8967.778ENSSTOG00000026817RBFOX39569.906Ictidomys_tridecemlineatus
ENSSFOG00015023260rbfox3a8969.401ENSJJAG00000014167Rbfox39672.928Jaculus_jaculus
ENSSFOG00015023260rbfox3a10087.968ENSKMAG00000006726rbfox3b10086.631Kryptolebias_marmoratus
ENSSFOG00015023260rbfox3a9784.677ENSLBEG00000004030rbfox3b10080.163Labrus_bergylta
ENSSFOG00015023260rbfox3a10089.037ENSLBEG00000022508-9784.270Labrus_bergylta
ENSSFOG00015023260rbfox3a9870.704ENSLACG00000018409-10074.684Latimeria_chalumnae
ENSSFOG00015023260rbfox3a5062.703ENSLACG00000000021-9562.703Latimeria_chalumnae
ENSSFOG00015023260rbfox3a10088.554ENSLOCG00000012267rbfox3a9897.853Lepisosteus_oculatus
ENSSFOG00015023260rbfox3a9971.148ENSLAFG00000016623RBFOX39975.381Loxodonta_africana
ENSSFOG00015023260rbfox3a8172.989ENSMFAG00000002247RBFOX39671.839Macaca_fascicularis
ENSSFOG00015023260rbfox3a8185.714ENSMMUG00000023028RBFOX39583.389Macaca_mulatta
ENSSFOG00015023260rbfox3a8185.382ENSMNEG00000041147RBFOX39583.056Macaca_nemestrina
ENSSFOG00015023260rbfox3a8185.714ENSMLEG00000025686RBFOX39583.389Mandrillus_leucophaeus
ENSSFOG00015023260rbfox3a9873.926ENSMAMG00000020600-9979.603Mastacembelus_armatus
ENSSFOG00015023260rbfox3a8582.540ENSMAMG00000019810rbfox3b9579.538Mastacembelus_armatus
ENSSFOG00015023260rbfox3a8366.469ENSMZEG00005003055-5392.623Maylandia_zebra
ENSSFOG00015023260rbfox3a10088.144ENSMZEG00005000781rbfox3b10086.856Maylandia_zebra
ENSSFOG00015023260rbfox3a6084.091ENSMGAG00000005600RBFOX38384.545Meleagris_gallopavo
ENSSFOG00015023260rbfox3a8970.347ENSMAUG00000013543Rbfox39674.309Mesocricetus_auratus
ENSSFOG00015023260rbfox3a8984.146ENSMICG00000014898RBFOX39683.056Microcebus_murinus
ENSSFOG00015023260rbfox3a8970.978ENSMOCG00000015373Rbfox39674.586Microtus_ochrogaster
ENSSFOG00015023260rbfox3a10085.638ENSMMOG00000020193rbfox3b10085.638Mola_mola
ENSSFOG00015023260rbfox3a9085.196ENSMODG00000002089RBFOX39778.873Monodelphis_domestica
ENSSFOG00015023260rbfox3a10087.166ENSMALG00000020407rbfox3b10085.561Monopterus_albus
ENSSFOG00015023260rbfox3a10087.629ENSMALG00000018270-10087.629Monopterus_albus
ENSSFOG00015023260rbfox3a8286.032MGP_CAROLIEiJ_G0017487Rbfox39691.367Mus_caroli
ENSSFOG00015023260rbfox3a8286.032ENSMUSG00000025576Rbfox39691.367Mus_musculus
ENSSFOG00015023260rbfox3a8283.861MGP_PahariEiJ_G0018614Rbfox39692.086Mus_pahari
ENSSFOG00015023260rbfox3a8286.349MGP_SPRETEiJ_G0018331Rbfox39691.367Mus_spretus
ENSSFOG00015023260rbfox3a9869.231ENSMPUG00000012319RBFOX39876.190Mustela_putorius_furo
ENSSFOG00015023260rbfox3a8971.609ENSNGAG00000018006Rbfox39675.414Nannospalax_galili
ENSSFOG00015023260rbfox3a10086.631ENSNBRG00000010102rbfox3b10086.364Neolamprologus_brichardi
ENSSFOG00015023260rbfox3a9079.279ENSNBRG00000022885-9177.381Neolamprologus_brichardi
ENSSFOG00015023260rbfox3a8557.367ENSNLEG00000000153-6679.775Nomascus_leucogenys
ENSSFOG00015023260rbfox3a8687.500ENSMEUG00000004218-7589.655Notamacropus_eugenii
ENSSFOG00015023260rbfox3a7386.885ENSOPRG00000016279-7880.729Ochotona_princeps
ENSSFOG00015023260rbfox3a8185.714ENSODEG00000009433RBFOX39585.714Octodon_degus
ENSSFOG00015023260rbfox3a10087.968ENSONIG00000009549rbfox3b10086.631Oreochromis_niloticus
ENSSFOG00015023260rbfox3a9185.714ENSONIG00000007282-9885.714Oreochromis_niloticus
ENSSFOG00015023260rbfox3a10088.402ENSORLG00000000905rbfox3b7782.123Oryzias_latipes
ENSSFOG00015023260rbfox3a10090.033ENSORLG00020018030rbfox3b10087.708Oryzias_latipes_hni
ENSSFOG00015023260rbfox3a10089.701ENSORLG00015009200rbfox3b10087.375Oryzias_latipes_hsok
ENSSFOG00015023260rbfox3a8082.911ENSOMEG00000014677rbfox3b8682.583Oryzias_melastigma
ENSSFOG00015023260rbfox3a9876.687ENSOGAG00000029595RBFOX39778.082Otolemur_garnettii
ENSSFOG00015023260rbfox3a8961.381ENSOARG00000002908RBFOX39958.040Ovis_aries
ENSSFOG00015023260rbfox3a6984.706ENSPPAG00000025383RBFOX38884.706Pan_paniscus
ENSSFOG00015023260rbfox3a8969.775ENSPPRG00000007819RBFOX39672.222Panthera_pardus
ENSSFOG00015023260rbfox3a8185.714ENSPTRG00000009727RBFOX39583.389Pan_troglodytes
ENSSFOG00015023260rbfox3a8185.714ENSPANG00000019837RBFOX39583.389Papio_anubis
ENSSFOG00015023260rbfox3a9867.905ENSPKIG00000022633-9268.222Paramormyrops_kingsleyae
ENSSFOG00015023260rbfox3a10096.736ENSPKIG00000010299rbfox3a9995.677Paramormyrops_kingsleyae
ENSSFOG00015023260rbfox3a8478.981ENSPMGG00000008000rbfox3b10077.778Periophthalmus_magnuspinnatus
ENSSFOG00015023260rbfox3a8971.609ENSPEMG00000010500Rbfox39675.138Peromyscus_maniculatus_bairdii
ENSSFOG00015023260rbfox3a5077.941ENSPMAG00000008689rbfox3b9979.902Petromyzon_marinus
ENSSFOG00015023260rbfox3a8984.387ENSPCIG00000005766RBFOX39383.803Phascolarctos_cinereus
ENSSFOG00015023260rbfox3a10088.402ENSPFOG00000018294rbfox3b10087.113Poecilia_formosa
ENSSFOG00015023260rbfox3a6886.923ENSPLAG00000000481rbfox3b8084.231Poecilia_latipinna
ENSSFOG00015023260rbfox3a9489.789ENSPMEG00000022997rbfox3b9587.732Poecilia_mexicana
ENSSFOG00015023260rbfox3a10088.770ENSPREG00000012886rbfox3b10086.472Poecilia_reticulata
ENSSFOG00015023260rbfox3a8973.824ENSPPYG00000008704RBFOX39973.824Pongo_abelii
ENSSFOG00015023260rbfox3a8171.182ENSPCAG00000001401RBFOX39672.911Procavia_capensis
ENSSFOG00015023260rbfox3a9471.386ENSPCOG00000012689RBFOX39772.126Propithecus_coquereli
ENSSFOG00015023260rbfox3a8162.931ENSPVAG00000015243RBFOX39664.655Pteropus_vampyrus
ENSSFOG00015023260rbfox3a9979.839ENSPNYG00000009079-9677.480Pundamilia_nyererei
ENSSFOG00015023260rbfox3a10071.545ENSPNYG00000010414rbfox3b9971.003Pundamilia_nyererei
ENSSFOG00015023260rbfox3a10091.789ENSPNAG00000002889rbfox3a10091.789Pygocentrus_nattereri
ENSSFOG00015023260rbfox3a9476.056ENSPNAG00000018173rbfox3b8573.978Pygocentrus_nattereri
ENSSFOG00015023260rbfox3a8183.444ENSRNOG00000003386Rbfox39583.444Rattus_norvegicus
ENSSFOG00015023260rbfox3a9877.072ENSRBIG00000040449RBFOX39778.652Rhinopithecus_bieti
ENSSFOG00015023260rbfox3a8185.714ENSRROG00000000766RBFOX39583.389Rhinopithecus_roxellana
ENSSFOG00015023260rbfox3a8185.382ENSSBOG00000031591RBFOX39583.056Saimiri_boliviensis_boliviensis
ENSSFOG00015023260rbfox3a8984.387ENSSHAG00000016076RBFOX39581.784Sarcophilus_harrisii
ENSSFOG00015023260rbfox3a10084.103ENSSMAG00000012618rbfox3b8783.077Scophthalmus_maximus
ENSSFOG00015023260rbfox3a10084.385ENSSMAG00000019052-10084.385Scophthalmus_maximus
ENSSFOG00015023260rbfox3a9781.044ENSSDUG00000015801-9880.435Seriola_dumerili
ENSSFOG00015023260rbfox3a9489.789ENSSDUG00000023183rbfox3b9587.732Seriola_dumerili
ENSSFOG00015023260rbfox3a9784.341ENSSLDG00000016098-9883.967Seriola_lalandi_dorsalis
ENSSFOG00015023260rbfox3a10087.968ENSSLDG00000000149rbfox3b10086.631Seriola_lalandi_dorsalis
ENSSFOG00015023260rbfox3a9884.122ENSSPUG00000011733RBFOX310082.727Sphenodon_punctatus
ENSSFOG00015023260rbfox3a10073.098ENSSPAG00000017571rbfox3b9972.283Stegastes_partitus
ENSSFOG00015023260rbfox3a7481.319ENSSPAG00000004898-7581.102Stegastes_partitus
ENSSFOG00015023260rbfox3a7488.603ENSSSCG00000039498RBFOX310076.276Sus_scrofa
ENSSFOG00015023260rbfox3a8985.303ENSTRUG00000004894rbfox3b9785.303Takifugu_rubripes
ENSSFOG00015023260rbfox3a9080.716ENSTNIG00000011278rbfox3b10074.690Tetraodon_nigroviridis
ENSSFOG00015023260rbfox3a8049.843ENSTBEG00000004296-7455.957Tupaia_belangeri
ENSSFOG00015023260rbfox3a9160.452ENSTTRG00000003676RBFOX39665.805Tursiops_truncatus
ENSSFOG00015023260rbfox3a8186.047ENSUAMG00000004668RBFOX39583.721Ursus_americanus
ENSSFOG00015023260rbfox3a9979.003ENSVVUG00000017864RBFOX39583.056Vulpes_vulpes
ENSSFOG00015023260rbfox3a9857.714ENSXETG00000020236rbfox39862.308Xenopus_tropicalis
ENSSFOG00015023260rbfox3a9787.088ENSXCOG00000018262rbfox3b10086.813Xiphophorus_couchianus
ENSSFOG00015023260rbfox3a10088.402ENSXMAG00000012939rbfox3b10087.113Xiphophorus_maculatus

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