EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015023275 (Gene tree)
Gene ID
108923135
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
14198 bases
Position
chrKV410820.1:959841-974038
Accession
108923135
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015036641RNA_pol_Rpb1_5PF04998.172.7e-10111
ENSSFOP00015036623RNA_pol_Rpb1_5PF04998.172.9e-10111
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29131
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29231
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29331
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29431
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29531
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29631
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29731
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29831
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-29931
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291031
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291131
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291231
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291331
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291431
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291531
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291631
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291731
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291831
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-291931
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292031
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292131
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292231
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292331
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292431
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292531
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292631
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292731
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292831
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-292931
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-293031
ENSSFOP00015036641RNA_pol_Rpb1_RPF05001.137.8e-293131
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22131
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22231
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22331
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22431
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22531
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22631
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22731
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22831
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-22931
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221031
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221131
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221231
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221331
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221431
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221531
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221631
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221731
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221831
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-221931
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222031
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222131
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222231
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222331
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222431
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222531
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222631
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222731
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222831
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-222931
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-223031
ENSSFOP00015036623RNA_pol_Rpb1_RPF05001.138e-223131
ENSSFOP00015036641RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSSFOP00015036623RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSSFOP00015036641RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSSFOP00015036623RNA_pol_Rpb1_2PF00623.201.2e-7411
ENSSFOP00015036641RNA_pol_Rpb1_3PF04983.184e-4911
ENSSFOP00015036623RNA_pol_Rpb1_3PF04983.184.2e-4911
ENSSFOP00015036641RNA_pol_Rpb1_1PF04997.122.1e-10811
ENSSFOP00015036623RNA_pol_Rpb1_1PF04997.122.2e-10811
ENSSFOP00015036641RNA_pol_Rpb1_7PF04990.129.7e-5511
ENSSFOP00015036623RNA_pol_Rpb1_7PF04990.121e-5411
ENSSFOP00015036641RNA_pol_Rpb1_6PF04992.141.3e-6811
ENSSFOP00015036623RNA_pol_Rpb1_6PF04992.141.3e-6811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015037035-5793-ENSSFOP000150366411930 (aa)--
ENSSFOT00015037017-8334XM_018733680ENSSFOP000150366231968 (aa)XP_018589196A0A1W4YLM7
Gene Model
Click here to download ENSSFOG00015023275's gene model file
Pathways
Pathway IDPathway NameSource
sfm03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023275's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015023275polr2a5435.838ENSSFOG00015019716polr1a7530.495
ENSSFOG00015023275polr2a6838.829ENSSFOG00015014357polr3a9139.006
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015023275polr2a8997.208ENSAPOG00000006552polr2a9097.208Acanthochromis_polyacanthus
ENSSFOG00015023275polr2a8294.300ENSAMEG00000016265-8294.307Ailuropoda_melanoleuca
ENSSFOG00015023275polr2a10097.720ENSACIG00000015982polr2a9997.720Amphilophus_citrinellus
ENSSFOG00015023275polr2a9597.395ENSAOCG00000004255polr2a9397.395Amphiprion_ocellaris
ENSSFOG00015023275polr2a10097.617ENSAPEG00000012623polr2a9997.617Amphiprion_percula
ENSSFOG00015023275polr2a10097.617ENSATEG00000019644polr2a9997.617Anabas_testudineus
ENSSFOG00015023275polr2a8294.969ENSACAG00000014561POLR2A8294.975Anolis_carolinensis
ENSSFOG00015023275polr2a8294.538ENSANAG00000020093-8294.667Aotus_nancymaae
ENSSFOG00015023275polr2a10097.358ENSACLG00000006735polr2a9997.358Astatotilapia_calliptera
ENSSFOG00015023275polr2a10097.720ENSAMXG00000020046polr2a9997.720Astyanax_mexicanus
ENSSFOG00015023275polr2a8294.538ENSBTAG00000046765POLR2A8294.544Bos_taurus
ENSSFOG00015023275polr2a9870.245WBGene00000123ama-19973.554Caenorhabditis_elegans
ENSSFOG00015023275polr2a8594.600ENSCAFG00000016532POLR2A9994.606Canis_familiaris
ENSSFOG00015023275polr2a8293.734ENSCAFG00020007929-8293.742Canis_lupus_dingo
ENSSFOG00015023275polr2a8294.538ENSCHIG00000027173-8294.544Capra_hircus
ENSSFOG00015023275polr2a9292.179ENSTSYG00000012803-8591.832Carlito_syrichta
ENSSFOG00015023275polr2a9991.217ENSCAPG00000001882-9893.805Cavia_aperea
ENSSFOG00015023275polr2a10088.986ENSCPOG00000014812-9993.587Cavia_porcellus
ENSSFOG00015023275polr2a8294.538ENSCCAG00000020938-8294.667Cebus_capucinus
ENSSFOG00015023275polr2a8294.475ENSCATG00000013680-8294.482Cercocebus_atys
ENSSFOG00015023275polr2a8294.413ENSCLAG00000012196-8294.540Chinchilla_lanigera
ENSSFOG00015023275polr2a8285.811ENSCSAG00000011644-8285.829Chlorocebus_sabaeus
ENSSFOG00015023275polr2a9084.272ENSCPBG00000012697POLR2A9985.917Chrysemys_picta_bellii
ENSSFOG00015023275polr2a9976.974ENSCING00000007884-9977.537Ciona_intestinalis
ENSSFOG00015023275polr2a9579.630ENSCSAVG00000008334-10079.897Ciona_savignyi
ENSSFOG00015023275polr2a8293.793ENSCANG00000010622-8293.800Colobus_angolensis_palliatus
ENSSFOG00015023275polr2a8189.383ENSCGRG00001003538Polr2a8586.951Cricetulus_griseus_chok1gshd
ENSSFOG00015023275polr2a8290.798ENSCGRG00000012105Polr2a9390.809Cricetulus_griseus_crigri
ENSSFOG00015023275polr2a10096.528ENSCSEG00000002635polr2a10096.528Cynoglossus_semilaevis
ENSSFOG00015023275polr2a10097.612ENSCVAG00000005156polr2a9997.612Cyprinodon_variegatus
ENSSFOG00015023275polr2a10097.359ENSDARG00000099966polr2a9997.359Danio_rerio
ENSSFOG00015023275polr2a8291.434ENSDNOG00000016482-8291.631Dasypus_novemcinctus
ENSSFOG00015023275polr2a8294.538ENSDORG00000008667Polr2a8294.667Dipodomys_ordii
ENSSFOG00015023275polr2a9970.148FBgn0003277RpII2159974.471Drosophila_melanogaster
ENSSFOG00015023275polr2a9490.163ENSETEG00000002540-8791.267Echinops_telfairi
ENSSFOG00015023275polr2a8187.399ENSEBUG00000013967polr2a8287.383Eptatretus_burgeri
ENSSFOG00015023275polr2a8292.551ENSEASG00005019114-8392.560Equus_asinus_asinus
ENSSFOG00015023275polr2a8294.538ENSECAG00000018485POLR2A8294.544Equus_caballus
ENSSFOG00015023275polr2a8594.393ENSEEUG00000001154-9594.393Erinaceus_europaeus
ENSSFOG00015023275polr2a8895.773ENSELUG00000014284polr2a8495.773Esox_lucius
ENSSFOG00015023275polr2a8294.600ENSFDAG00000008287-8294.606Fukomys_damarensis
ENSSFOG00015023275polr2a9997.547ENSFHEG00000001768polr2a10097.547Fundulus_heteroclitus
ENSSFOG00015023275polr2a9992.831ENSGMOG00000007725polr2a10092.857Gadus_morhua
ENSSFOG00015023275polr2a9994.393ENSGAFG00000005389polr2a9994.665Gambusia_affinis
ENSSFOG00015023275polr2a9993.168ENSGACG00000019366polr2a10092.940Gasterosteus_aculeatus
ENSSFOG00015023275polr2a8292.446ENSGGOG00000014800-9692.995Gorilla_gorilla
ENSSFOG00015023275polr2a9997.534ENSHBUG00000018937polr2a10097.429Haplochromis_burtoni
ENSSFOG00015023275polr2a8294.600ENSHGLG00000012381POLR2A8294.730Heterocephalus_glaber_female
ENSSFOG00015023275polr2a8294.600ENSHGLG00100014843POLR2A8294.730Heterocephalus_glaber_male
ENSSFOG00015023275polr2a10097.053ENSHCOG00000011874polr2a9997.053Hippocampus_comes
ENSSFOG00015023275polr2a10097.409ENSIPUG00000002613Polr2a9997.409Ictalurus_punctatus
ENSSFOG00015023275polr2a8294.538ENSSTOG00000001304-8294.667Ictidomys_tridecemlineatus
ENSSFOG00015023275polr2a8294.538ENSJJAG00000013049Polr2a8294.667Jaculus_jaculus
ENSSFOG00015023275polr2a8087.602ENSKMAG00000016343polr2a8585.318Kryptolebias_marmoratus
ENSSFOG00015023275polr2a10097.254ENSLBEG00000027652polr2a10097.254Labrus_bergylta
ENSSFOG00015023275polr2a8085.515ENSLACG00000012071POLR2A8185.588Latimeria_chalumnae
ENSSFOG00015023275polr2a8997.921ENSLOCG00000013863polr2a9897.455Lepisosteus_oculatus
ENSSFOG00015023275polr2a10091.272ENSLAFG00000008626-9594.544Loxodonta_africana
ENSSFOG00015023275polr2a5193.156ENSMFAG00000007042-9993.156Macaca_fascicularis
ENSSFOG00015023275polr2a8294.475ENSMMUG00000023620-9394.482Macaca_mulatta
ENSSFOG00015023275polr2a8294.041ENSMNEG00000040407-8294.048Macaca_nemestrina
ENSSFOG00015023275polr2a8289.062ENSMLEG00000030263-9993.156Mandrillus_leucophaeus
ENSSFOG00015023275polr2a10097.510ENSMAMG00000003351polr2a9997.510Mastacembelus_armatus
ENSSFOG00015023275polr2a10097.256ENSMZEG00005021429polr2a9997.256Maylandia_zebra
ENSSFOG00015023275polr2a5194.292ENSMAUG00000021055-9994.292Mesocricetus_auratus
ENSSFOG00015023275polr2a8294.538ENSMICG00000013372-9893.756Microcebus_murinus
ENSSFOG00015023275polr2a9992.195ENSMOCG00000018279Polr2a10092.205Microtus_ochrogaster
ENSSFOG00015023275polr2a8496.464ENSMMOG00000012515polr2a9593.672Mola_mola
ENSSFOG00015023275polr2a8294.413ENSMODG00000007009-8294.420Monodelphis_domestica
ENSSFOG00015023275polr2a9494.486ENSMALG00000008716polr2a9497.459Monopterus_albus
ENSSFOG00015023275polr2a8294.538MGP_CAROLIEiJ_G0016587Polr2a8294.667Mus_caroli
ENSSFOG00015023275polr2a8294.538ENSMUSG00000005198Polr2a8294.667Mus_musculus
ENSSFOG00015023275polr2a8292.398MGP_PahariEiJ_G0017718Polr2a8292.407Mus_pahari
ENSSFOG00015023275polr2a8294.538MGP_SPRETEiJ_G0017423Polr2a8294.667Mus_spretus
ENSSFOG00015023275polr2a8294.538ENSMPUG00000009648-8294.544Mustela_putorius_furo
ENSSFOG00015023275polr2a8293.924ENSMLUG00000009088-8293.932Myotis_lucifugus
ENSSFOG00015023275polr2a8294.538ENSNGAG00000002543Polr2a8294.667Nannospalax_galili
ENSSFOG00015023275polr2a10097.565ENSNBRG00000002005polr2a9997.565Neolamprologus_brichardi
ENSSFOG00015023275polr2a8194.660ENSNLEG00000009460-8294.667Nomascus_leucogenys
ENSSFOG00015023275polr2a9495.207ENSMEUG00000008611-9786.906Notamacropus_eugenii
ENSSFOG00015023275polr2a8094.378ENSOPRG00000015116-9994.378Ochotona_princeps
ENSSFOG00015023275polr2a8992.984ENSODEG00000017674-8589.859Octodon_degus
ENSSFOG00015023275polr2a10097.510ENSONIG00000009231polr2a9997.510Oreochromis_niloticus
ENSSFOG00015023275polr2a9990.460ENSOCUG00000017929-10094.420Oryctolagus_cuniculus
ENSSFOG00015023275polr2a10097.513ENSORLG00000006431polr2a9997.513Oryzias_latipes
ENSSFOG00015023275polr2a10097.513ENSORLG00020010235polr2a9997.513Oryzias_latipes_hni
ENSSFOG00015023275polr2a10097.409ENSORLG00015007075polr2a9997.409Oryzias_latipes_hsok
ENSSFOG00015023275polr2a9894.835ENSOMEG00000010713polr2a10097.138Oryzias_melastigma
ENSSFOG00015023275polr2a8294.538ENSOGAG00000033608-8294.544Otolemur_garnettii
ENSSFOG00015023275polr2a9494.538ENSOARG00000013874-9991.754Ovis_aries
ENSSFOG00015023275polr2a8194.562ENSPPAG00000043734-8792.091Pan_paniscus
ENSSFOG00015023275polr2a8194.660ENSPTRG00000008691POLR2A8294.667Pan_troglodytes
ENSSFOG00015023275polr2a8293.793ENSPANG00000024099-8293.905Papio_anubis
ENSSFOG00015023275polr2a8197.138ENSPKIG00000005727polr2a8597.138Paramormyrops_kingsleyae
ENSSFOG00015023275polr2a9892.831ENSPSIG00000014006POLR2A10092.751Pelodiscus_sinensis
ENSSFOG00015023275polr2a10096.713ENSPMGG00000019734polr2a9996.713Periophthalmus_magnuspinnatus
ENSSFOG00015023275polr2a8294.538ENSPEMG00000012521Polr2a8294.667Peromyscus_maniculatus_bairdii
ENSSFOG00015023275polr2a8694.417ENSPCIG00000028851-8294.417Phascolarctos_cinereus
ENSSFOG00015023275polr2a9997.889ENSPFOG00000007890polr2a9997.889Poecilia_formosa
ENSSFOG00015023275polr2a9997.889ENSPLAG00000007399polr2a9997.889Poecilia_latipinna
ENSSFOG00015023275polr2a10097.954ENSPMEG00000002071polr2a9997.954Poecilia_mexicana
ENSSFOG00015023275polr2a10097.720ENSPREG00000013122polr2a9997.720Poecilia_reticulata
ENSSFOG00015023275polr2a8294.538ENSPPYG00000007924-8294.544Pongo_abelii
ENSSFOG00015023275polr2a7494.868ENSPCAG00000006951-7494.868Procavia_capensis
ENSSFOG00015023275polr2a8194.660ENSPCOG00000025260-8294.667Propithecus_coquereli
ENSSFOG00015023275polr2a8294.227ENSPVAG00000005069-8294.234Pteropus_vampyrus
ENSSFOG00015023275polr2a10097.307ENSPNYG00000022340polr2a9997.307Pundamilia_nyererei
ENSSFOG00015023275polr2a10097.815ENSPNAG00000011237polr2a9997.815Pygocentrus_nattereri
ENSSFOG00015023275polr2a8294.600ENSRNOG00000028834Polr2a8294.606Rattus_norvegicus
ENSSFOG00015023275polr2a8294.103ENSRBIG00000002471-9194.110Rhinopithecus_bieti
ENSSFOG00015023275polr2a8294.475ENSRROG00000029583-9293.614Rhinopithecus_roxellana
ENSSFOG00015023275polr2a8450.215YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSSFOG00015023275polr2a8294.538ENSSBOG00000000808-8294.667Saimiri_boliviensis_boliviensis
ENSSFOG00015023275polr2a9394.413ENSSHAG00000002858-8494.420Sarcophilus_harrisii
ENSSFOG00015023275polr2a10094.919ENSSMAG00000009137polr2a9994.411Scophthalmus_maximus
ENSSFOG00015023275polr2a10097.668ENSSDUG00000020466polr2a9997.668Seriola_dumerili
ENSSFOG00015023275polr2a10097.617ENSSLDG00000020613polr2a9997.617Seriola_lalandi_dorsalis
ENSSFOG00015023275polr2a9590.012ENSSARG00000005875-9990.830Sorex_araneus
ENSSFOG00015023275polr2a10097.378ENSSPAG00000016741polr2a9597.378Stegastes_partitus
ENSSFOG00015023275polr2a8293.606ENSSSCG00000028278-8293.614Sus_scrofa
ENSSFOG00015023275polr2a9891.507ENSTRUG00000012320polr2a8191.507Takifugu_rubripes
ENSSFOG00015023275polr2a9895.844ENSTNIG00000010136polr2a10095.844Tetraodon_nigroviridis
ENSSFOG00015023275polr2a7695.918ENSTBEG00000013294-5895.918Tupaia_belangeri
ENSSFOG00015023275polr2a8292.862ENSTTRG00000014273-8292.870Tursiops_truncatus
ENSSFOG00015023275polr2a9394.356ENSUAMG00000014866-10091.713Ursus_americanus
ENSSFOG00015023275polr2a7491.913ENSUMAG00000015732-8091.925Ursus_maritimus
ENSSFOG00015023275polr2a6597.826ENSVPAG00000008842-7697.826Vicugna_pacos
ENSSFOG00015023275polr2a8294.600ENSVVUG00000027878-8394.606Vulpes_vulpes
ENSSFOG00015023275polr2a8194.084ENSXETG00000012465polr2a8294.092Xenopus_tropicalis
ENSSFOG00015023275polr2a9697.072ENSXCOG00000001804polr2a9997.072Xiphophorus_couchianus
ENSSFOG00015023275polr2a10097.720ENSXMAG00000015687polr2a9997.720Xiphophorus_maculatus

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