EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015023666 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 2920 bases
Position: chrKV411107.1:2848692-2851611
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015037192	RRM_1	PF00076.22	5.1e-23	1	2
ENSSFOP00015037192	RRM_1	PF00076.22	5.1e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015037597	-	1202	-	ENSSFOP00015037192	289 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015023666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015023666	raver1	83	30.000	ENSSFOG00015015838	elavl4	51	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023666	raver1	79	72.368	ENSG00000161847	RAVER1	73	68.571	Homo_sapiens
ENSSFOG00015023666	raver1	96	72.028	ENSACIG00000008853	raver1	90	75.188	Amphilophus_citrinellus
ENSSFOG00015023666	raver1	90	75.746	ENSDARG00000052617	raver1	82	75.746	Danio_rerio
ENSSFOG00015023666	raver1	96	69.072	ENSFHEG00000001653	raver1	80	78.926	Fundulus_heteroclitus
ENSSFOG00015023666	raver1	96	72.664	ENSONIG00000001559	raver1	86	75.281	Oreochromis_niloticus
ENSSFOG00015023666	raver1	90	75.281	ENSPKIG00000015863	raver1	83	75.281	Paramormyrops_kingsleyae
ENSSFOG00015023666	raver1	96	71.626	ENSPMGG00000001451	raver1	79	78.512	Periophthalmus_magnuspinnatus
ENSSFOG00015023666	raver1	96	70.790	ENSTNIG00000018570	raver1	78	81.333	Tetraodon_nigroviridis