EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015023675 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 61240 bases
Position: chrKV411220.1:3306295-3367534
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015037204	Fox-1_C	PF12414.8	4.1e-10	1	1
ENSSFOP00015037204	RRM_1	PF00076.22	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015037610	-	1035	-	ENSSFOP00015037204	344 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015023675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015023675	rbfox1	89	46.176	ENSSFOG00015000675	rbfox1l	84	46.087
ENSSFOG00015023675	rbfox1	78	48.529	ENSSFOG00015010482	-	85	49.854
ENSSFOG00015023675	rbfox1	64	63.677	ENSSFOG00015004716	RBFOX3	93	51.976
ENSSFOG00015023675	rbfox1	98	56.183	ENSSFOG00015023260	rbfox3a	99	54.683
ENSSFOG00015023675	rbfox1	86	64.242	ENSSFOG00015009955	-	84	64.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023675	rbfox1	97	86.667	ENSG00000078328	RBFOX1	100	90.476	Homo_sapiens
ENSSFOG00015023675	rbfox1	100	67.005	ENSAPOG00000003197	rbfox1	100	68.462	Acanthochromis_polyacanthus
ENSSFOG00015023675	rbfox1	64	90.000	ENSAMEG00000008605	RBFOX1	88	90.000	Ailuropoda_melanoleuca
ENSSFOG00015023675	rbfox1	62	56.506	ENSACIG00000005478	rbfox1	68	56.506	Amphilophus_citrinellus
ENSSFOG00015023675	rbfox1	66	75.102	ENSAOCG00000008283	rbfox1	84	74.694	Amphiprion_ocellaris
ENSSFOG00015023675	rbfox1	94	65.242	ENSAPEG00000010636	rbfox1	100	66.006	Amphiprion_percula
ENSSFOG00015023675	rbfox1	66	73.684	ENSATEG00000007513	rbfox1	84	73.684	Anabas_testudineus
ENSSFOG00015023675	rbfox1	99	68.828	ENSAPLG00000013263	RBFOX1	99	68.828	Anas_platyrhynchos
ENSSFOG00015023675	rbfox1	88	89.655	ENSACAG00000004013	RBFOX1	76	89.655	Anolis_carolinensis
ENSSFOG00015023675	rbfox1	100	86.667	ENSANAG00000029527	RBFOX1	97	77.072	Aotus_nancymaae
ENSSFOG00015023675	rbfox1	71	84.426	ENSAMXG00000002431	rbfox1	69	84.426	Astyanax_mexicanus
ENSSFOG00015023675	rbfox1	100	86.667	ENSBTAG00000007210	RBFOX1	100	67.079	Bos_taurus
ENSSFOG00015023675	rbfox1	97	87.778	ENSCJAG00000017351	RBFOX1	97	73.698	Callithrix_jacchus
ENSSFOG00015023675	rbfox1	97	88.889	ENSCAFG00000019082	RBFOX1	93	67.766	Canis_familiaris
ENSSFOG00015023675	rbfox1	73	82.937	ENSCAFG00020024881	RBFOX1	69	82.937	Canis_lupus_dingo
ENSSFOG00015023675	rbfox1	100	87.778	ENSCHIG00000023549	RBFOX1	87	87.778	Capra_hircus
ENSSFOG00015023675	rbfox1	97	86.667	ENSTSYG00000005334	RBFOX1	100	77.008	Carlito_syrichta
ENSSFOG00015023675	rbfox1	93	87.826	ENSCAPG00000017669	RBFOX1	100	68.622	Cavia_aperea
ENSSFOG00015023675	rbfox1	93	87.826	ENSCPOG00000011314	RBFOX1	100	68.182	Cavia_porcellus
ENSSFOG00015023675	rbfox1	97	86.667	ENSCCAG00000023031	RBFOX1	97	77.072	Cebus_capucinus
ENSSFOG00015023675	rbfox1	97	86.667	ENSCATG00000033816	RBFOX1	97	77.348	Cercocebus_atys
ENSSFOG00015023675	rbfox1	93	87.778	ENSCLAG00000012761	RBFOX1	100	67.990	Chinchilla_lanigera
ENSSFOG00015023675	rbfox1	76	82.824	ENSCSAG00000008739	RBFOX1	69	82.824	Chlorocebus_sabaeus
ENSSFOG00015023675	rbfox1	77	89.231	ENSCHOG00000012843	RBFOX1	64	89.231	Choloepus_hoffmanni
ENSSFOG00015023675	rbfox1	99	88.889	ENSCPBG00000026626	RBFOX1	100	67.574	Chrysemys_picta_bellii
ENSSFOG00015023675	rbfox1	97	86.667	ENSCANG00000033125	RBFOX1	97	77.348	Colobus_angolensis_palliatus
ENSSFOG00015023675	rbfox1	93	87.778	ENSCGRG00001013729	Rbfox1	98	67.684	Cricetulus_griseus_chok1gshd
ENSSFOG00015023675	rbfox1	93	87.778	ENSCGRG00000003272	Rbfox1	98	67.684	Cricetulus_griseus_crigri
ENSSFOG00015023675	rbfox1	94	64.054	ENSCSEG00000008840	rbfox1	100	64.324	Cynoglossus_semilaevis
ENSSFOG00015023675	rbfox1	100	74.531	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSSFOG00015023675	rbfox1	97	68.448	ENSDNOG00000043612	RBFOX1	94	68.702	Dasypus_novemcinctus
ENSSFOG00015023675	rbfox1	97	80.198	ENSDORG00000010024	Rbfox1	84	80.198	Dipodomys_ordii
ENSSFOG00015023675	rbfox1	89	85.556	ENSETEG00000003771	RBFOX1	73	85.556	Echinops_telfairi
ENSSFOG00015023675	rbfox1	100	87.778	ENSEASG00005011599	RBFOX1	100	67.574	Equus_asinus_asinus
ENSSFOG00015023675	rbfox1	93	87.778	ENSECAG00000012667	RBFOX1	89	72.533	Equus_caballus
ENSSFOG00015023675	rbfox1	79	77.660	ENSELUG00000013096	rbfox1	97	77.128	Esox_lucius
ENSSFOG00015023675	rbfox1	98	77.198	ENSFCAG00000025322	RBFOX1	89	77.473	Felis_catus
ENSSFOG00015023675	rbfox1	70	86.831	ENSFALG00000004027	RBFOX1	72	86.831	Ficedula_albicollis
ENSSFOG00015023675	rbfox1	93	87.826	ENSFDAG00000007388	RBFOX1	98	68.448	Fukomys_damarensis
ENSSFOG00015023675	rbfox1	96	88.889	ENSGALG00000034325	RBFOX1	79	88.889	Gallus_gallus
ENSSFOG00015023675	rbfox1	96	88.889	ENSGAGG00000023681	RBFOX1	94	77.089	Gopherus_agassizii
ENSSFOG00015023675	rbfox1	97	86.667	ENSGGOG00000016871	-	97	77.348	Gorilla_gorilla
ENSSFOG00015023675	rbfox1	93	87.778	ENSHGLG00000016944	RBFOX1	100	67.990	Heterocephalus_glaber_female
ENSSFOG00015023675	rbfox1	93	87.778	ENSHGLG00100003272	RBFOX1	100	67.990	Heterocephalus_glaber_male
ENSSFOG00015023675	rbfox1	82	65.815	ENSHCOG00000016419	rbfox1	91	66.349	Hippocampus_comes
ENSSFOG00015023675	rbfox1	100	76.301	ENSIPUG00000015215	rbfox1	100	76.301	Ictalurus_punctatus
ENSSFOG00015023675	rbfox1	97	87.778	ENSSTOG00000000322	RBFOX1	98	67.684	Ictidomys_tridecemlineatus
ENSSFOG00015023675	rbfox1	93	88.889	ENSJJAG00000002575	Rbfox1	98	66.158	Jaculus_jaculus
ENSSFOG00015023675	rbfox1	97	70.027	ENSLBEG00000014659	rbfox1	98	70.027	Labrus_bergylta
ENSSFOG00015023675	rbfox1	97	91.954	ENSLOCG00000006675	rbfox1	82	91.954	Lepisosteus_oculatus
ENSSFOG00015023675	rbfox1	73	87.778	ENSLAFG00000011480	RBFOX1	100	64.423	Loxodonta_africana
ENSSFOG00015023675	rbfox1	97	86.667	ENSMFAG00000036447	RBFOX1	97	77.624	Macaca_fascicularis
ENSSFOG00015023675	rbfox1	97	86.667	ENSMMUG00000003458	RBFOX1	97	77.624	Macaca_mulatta
ENSSFOG00015023675	rbfox1	97	86.667	ENSMNEG00000032034	RBFOX1	93	67.766	Macaca_nemestrina
ENSSFOG00015023675	rbfox1	97	86.667	ENSMLEG00000015382	RBFOX1	97	77.348	Mandrillus_leucophaeus
ENSSFOG00015023675	rbfox1	94	67.671	ENSMAMG00000003142	rbfox1	100	68.219	Mastacembelus_armatus
ENSSFOG00015023675	rbfox1	76	83.525	ENSMGAG00000008606	RBFOX1	89	83.525	Meleagris_gallopavo
ENSSFOG00015023675	rbfox1	95	50.585	ENSMAUG00000020570	Rbfox1	95	50.585	Mesocricetus_auratus
ENSSFOG00015023675	rbfox1	97	76.519	ENSMICG00000034286	RBFOX1	97	76.796	Microcebus_murinus
ENSSFOG00015023675	rbfox1	93	87.778	ENSMOCG00000020932	Rbfox1	100	68.041	Microtus_ochrogaster
ENSSFOG00015023675	rbfox1	82	71.864	ENSMMOG00000009716	rbfox1	86	72.542	Mola_mola
ENSSFOG00015023675	rbfox1	67	87.013	ENSMODG00000005826	RBFOX1	64	87.013	Monodelphis_domestica
ENSSFOG00015023675	rbfox1	98	67.819	ENSMALG00000003337	rbfox1	98	68.182	Monopterus_albus
ENSSFOG00015023675	rbfox1	93	87.778	MGP_CAROLIEiJ_G0020427	Rbfox1	98	67.939	Mus_caroli
ENSSFOG00015023675	rbfox1	93	87.778	ENSMUSG00000008658	Rbfox1	100	71.866	Mus_musculus
ENSSFOG00015023675	rbfox1	93	87.778	MGP_PahariEiJ_G0016135	Rbfox1	98	67.939	Mus_pahari
ENSSFOG00015023675	rbfox1	93	87.778	MGP_SPRETEiJ_G0021321	Rbfox1	98	67.430	Mus_spretus
ENSSFOG00015023675	rbfox1	73	82.937	ENSMPUG00000014822	RBFOX1	63	82.937	Mustela_putorius_furo
ENSSFOG00015023675	rbfox1	73	64.309	ENSMLUG00000015896	RBFOX1	100	64.309	Myotis_lucifugus
ENSSFOG00015023675	rbfox1	93	88.506	ENSNGAG00000023276	Rbfox1	80	88.506	Nannospalax_galili
ENSSFOG00015023675	rbfox1	91	69.643	ENSNBRG00000011084	rbfox1	74	69.643	Neolamprologus_brichardi
ENSSFOG00015023675	rbfox1	97	86.667	ENSNLEG00000010017	-	97	77.072	Nomascus_leucogenys
ENSSFOG00015023675	rbfox1	89	92.308	ENSMEUG00000012525	RBFOX1	73	92.308	Notamacropus_eugenii
ENSSFOG00015023675	rbfox1	93	86.957	ENSOPRG00000006199	-	76	86.957	Ochotona_princeps
ENSSFOG00015023675	rbfox1	93	87.778	ENSODEG00000013166	RBFOX1	98	67.939	Octodon_degus
ENSSFOG00015023675	rbfox1	73	86.166	ENSOANG00000002379	RBFOX1	66	86.166	Ornithorhynchus_anatinus
ENSSFOG00015023675	rbfox1	63	90.323	ENSOCUG00000001205	-	96	90.323	Oryctolagus_cuniculus
ENSSFOG00015023675	rbfox1	98	67.254	ENSOGAG00000025535	RBFOX1	99	67.506	Otolemur_garnettii
ENSSFOG00015023675	rbfox1	67	75.217	ENSOARG00000005135	RBFOX1	89	75.217	Ovis_aries
ENSSFOG00015023675	rbfox1	97	77.008	ENSPPAG00000036238	-	100	77.285	Pan_paniscus
ENSSFOG00015023675	rbfox1	97	88.889	ENSPPRG00000006546	RBFOX1	97	77.624	Panthera_pardus
ENSSFOG00015023675	rbfox1	98	74.468	ENSPTIG00000021154	RBFOX1	100	74.468	Panthera_tigris_altaica
ENSSFOG00015023675	rbfox1	97	86.667	ENSPTRG00000007744	RBFOX1	97	77.348	Pan_troglodytes
ENSSFOG00015023675	rbfox1	97	86.667	ENSPANG00000026500	RBFOX1	97	77.348	Papio_anubis
ENSSFOG00015023675	rbfox1	98	75.068	ENSPKIG00000009667	-	95	75.660	Paramormyrops_kingsleyae
ENSSFOG00015023675	rbfox1	66	93.833	ENSPKIG00000019353	rbfox1	73	93.833	Paramormyrops_kingsleyae
ENSSFOG00015023675	rbfox1	100	69.479	ENSPSIG00000006523	RBFOX1	100	69.727	Pelodiscus_sinensis
ENSSFOG00015023675	rbfox1	93	87.778	ENSPEMG00000017607	Rbfox1	98	67.939	Peromyscus_maniculatus_bairdii
ENSSFOG00015023675	rbfox1	68	70.833	ENSPCIG00000026887	RBFOX1	100	70.833	Phascolarctos_cinereus
ENSSFOG00015023675	rbfox1	73	82.937	ENSPPYG00000007079	-	63	82.937	Pongo_abelii
ENSSFOG00015023675	rbfox1	85	76.364	ENSPCAG00000002630	RBFOX1	80	76.364	Procavia_capensis
ENSSFOG00015023675	rbfox1	97	86.667	ENSPCOG00000025687	RBFOX1	97	76.796	Propithecus_coquereli
ENSSFOG00015023675	rbfox1	87	89.855	ENSPVAG00000013467	RBFOX1	93	65.482	Pteropus_vampyrus
ENSSFOG00015023675	rbfox1	94	72.900	ENSPNAG00000023109	rbfox1	100	73.171	Pygocentrus_nattereri
ENSSFOG00015023675	rbfox1	98	67.342	ENSRNOG00000002827	Rbfox1	94	67.595	Rattus_norvegicus
ENSSFOG00015023675	rbfox1	97	77.008	ENSRBIG00000044478	RBFOX1	100	77.285	Rhinopithecus_bieti
ENSSFOG00015023675	rbfox1	97	86.667	ENSRROG00000044411	RBFOX1	97	77.348	Rhinopithecus_roxellana
ENSSFOG00015023675	rbfox1	97	77.072	ENSSBOG00000033726	RBFOX1	97	77.348	Saimiri_boliviensis_boliviensis
ENSSFOG00015023675	rbfox1	92	91.954	ENSSHAG00000009257	RBFOX1	79	91.954	Sarcophilus_harrisii
ENSSFOG00015023675	rbfox1	98	68.504	ENSSMAG00000015505	rbfox1	93	69.291	Scophthalmus_maximus
ENSSFOG00015023675	rbfox1	98	73.580	ENSSDUG00000016413	rbfox1	99	74.286	Seriola_dumerili
ENSSFOG00015023675	rbfox1	82	71.622	ENSSLDG00000009353	rbfox1	88	72.297	Seriola_lalandi_dorsalis
ENSSFOG00015023675	rbfox1	82	76.375	ENSSPUG00000009732	RBFOX1	87	76.774	Sphenodon_punctatus
ENSSFOG00015023675	rbfox1	97	74.352	ENSSPAG00000009723	rbfox1	98	75.219	Stegastes_partitus
ENSSFOG00015023675	rbfox1	93	85.714	ENSSSCG00000007917	RBFOX1	91	70.526	Sus_scrofa
ENSSFOG00015023675	rbfox1	97	69.466	ENSTGUG00000004562	RBFOX1	100	69.466	Taeniopygia_guttata
ENSSFOG00015023675	rbfox1	98	68.421	ENSTRUG00000020940	rbfox1	100	69.211	Takifugu_rubripes
ENSSFOG00015023675	rbfox1	53	89.362	ENSTNIG00000002567	rbfox1	60	89.362	Tetraodon_nigroviridis
ENSSFOG00015023675	rbfox1	65	95.588	ENSTBEG00000009169	-	54	95.588	Tupaia_belangeri
ENSSFOG00015023675	rbfox1	97	86.667	ENSTTRG00000005700	RBFOX1	93	66.751	Tursiops_truncatus
ENSSFOG00015023675	rbfox1	95	76.423	ENSUAMG00000024633	RBFOX1	100	75.575	Ursus_americanus
ENSSFOG00015023675	rbfox1	95	80.857	ENSUMAG00000003579	RBFOX1	97	80.857	Ursus_maritimus
ENSSFOG00015023675	rbfox1	65	95.588	ENSVPAG00000001284	RBFOX1	74	62.500	Vicugna_pacos
ENSSFOG00015023675	rbfox1	86	93.689	ENSVVUG00000017311	RBFOX1	83	88.889	Vulpes_vulpes