EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015023759 (Gene tree)
Gene ID: 108926613
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 24898 bases
Position: chrKV410855.1:3233697-3258594
Accession: 108926613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015037344	ResIII	PF04851.15	4.8e-07	1	1
ENSSFOP00015037348	ResIII	PF04851.15	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015037758	-	5400	-	ENSSFOP00015037348	1799 (aa)	-	-
ENSSFOT00015037754	-	5503	XM_018739399	ENSSFOP00015037344	1816 (aa)	XP_018594915	-

Gene Model

Click here to download ENSSFOG00015023759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015023759's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015023759	chd2	62	67.637	ENSSFOG00015007161	chd1	88	64.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015023759	chd2	100	72.953	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSSFOG00015023759	chd2	100	82.779	ENSAPOG00000008913	chd2	100	83.224	Acanthochromis_polyacanthus
ENSSFOG00015023759	chd2	64	75.771	ENSAMEG00000010805	-	100	76.627	Ailuropoda_melanoleuca
ENSSFOG00015023759	chd2	100	80.851	ENSAOCG00000016332	chd2	100	80.797	Amphiprion_ocellaris
ENSSFOG00015023759	chd2	100	83.033	ENSAPEG00000016676	chd2	100	83.252	Amphiprion_percula
ENSSFOG00015023759	chd2	100	82.852	ENSATEG00000005246	chd2	100	82.852	Anabas_testudineus
ENSSFOG00015023759	chd2	100	73.071	ENSAPLG00000011141	-	100	72.977	Anas_platyrhynchos
ENSSFOG00015023759	chd2	98	70.263	ENSACAG00000000088	-	99	69.343	Anolis_carolinensis
ENSSFOG00015023759	chd2	100	73.046	ENSANAG00000024017	-	100	73.261	Aotus_nancymaae
ENSSFOG00015023759	chd2	94	82.353	ENSACLG00000021370	chd2	99	83.333	Astatotilapia_calliptera
ENSSFOG00015023759	chd2	100	72.830	ENSCJAG00000020444	-	100	73.046	Callithrix_jacchus
ENSSFOG00015023759	chd2	99	73.134	ENSCAFG00000010998	CHD2	100	75.573	Canis_familiaris
ENSSFOG00015023759	chd2	99	71.738	ENSCHIG00000022261	-	99	71.738	Capra_hircus
ENSSFOG00015023759	chd2	100	73.154	ENSTSYG00000003272	-	99	74.153	Carlito_syrichta
ENSSFOG00015023759	chd2	93	76.316	ENSCPOG00000005800	-	100	76.234	Cavia_porcellus
ENSSFOG00015023759	chd2	100	73.046	ENSCCAG00000035304	-	100	73.261	Cebus_capucinus
ENSSFOG00015023759	chd2	100	72.953	ENSCATG00000031069	-	100	73.168	Cercocebus_atys
ENSSFOG00015023759	chd2	100	72.806	ENSCLAG00000016269	-	100	72.845	Chinchilla_lanigera
ENSSFOG00015023759	chd2	100	73.006	ENSCSAG00000017007	-	100	73.222	Chlorocebus_sabaeus
ENSSFOG00015023759	chd2	78	74.972	ENSCHOG00000000608	-	75	81.990	Choloepus_hoffmanni
ENSSFOG00015023759	chd2	80	78.952	ENSCPBG00000018049	-	97	83.333	Chrysemys_picta_bellii
ENSSFOG00015023759	chd2	74	53.863	ENSCSAVG00000007580	-	94	58.588	Ciona_savignyi
ENSSFOG00015023759	chd2	100	72.953	ENSCANG00000038126	-	100	73.168	Colobus_angolensis_palliatus
ENSSFOG00015023759	chd2	100	73.208	ENSCGRG00001006649	Chd2	100	72.938	Cricetulus_griseus_chok1gshd
ENSSFOG00015023759	chd2	100	73.208	ENSCGRG00000018154	Chd2	100	72.938	Cricetulus_griseus_crigri
ENSSFOG00015023759	chd2	97	76.945	ENSCSEG00000003646	chd2	96	81.481	Cynoglossus_semilaevis
ENSSFOG00015023759	chd2	100	73.650	ENSCVAG00000002427	chd2	100	72.742	Cyprinodon_variegatus
ENSSFOG00015023759	chd2	100	83.197	ENSDARG00000060687	chd2	100	84.562	Danio_rerio
ENSSFOG00015023759	chd2	99	73.168	ENSDNOG00000009796	-	100	73.114	Dasypus_novemcinctus
ENSSFOG00015023759	chd2	51	70.823	ENSEBUG00000014994	chd2	88	71.410	Eptatretus_burgeri
ENSSFOG00015023759	chd2	99	73.529	ENSEASG00005015526	-	97	80.110	Equus_asinus_asinus
ENSSFOG00015023759	chd2	91	93.103	ENSELUG00000017981	chd2	97	93.103	Esox_lucius
ENSSFOG00015023759	chd2	96	74.299	ENSFALG00000010369	-	100	73.208	Ficedula_albicollis
ENSSFOG00015023759	chd2	100	72.806	ENSFDAG00000020651	-	100	72.953	Fukomys_damarensis
ENSSFOG00015023759	chd2	96	80.000	ENSFHEG00000002119	chd2	100	80.000	Fundulus_heteroclitus
ENSSFOG00015023759	chd2	94	80.602	ENSGMOG00000002890	chd2	99	80.139	Gadus_morhua
ENSSFOG00015023759	chd2	100	73.412	ENSGALG00000006949	CHD2	100	73.520	Gallus_gallus
ENSSFOG00015023759	chd2	97	79.273	ENSGAFG00000001905	chd2	99	78.788	Gambusia_affinis
ENSSFOG00015023759	chd2	94	80.464	ENSGACG00000013246	chd2	99	81.159	Gasterosteus_aculeatus
ENSSFOG00015023759	chd2	79	81.801	ENSGAGG00000013176	-	99	85.474	Gopherus_agassizii
ENSSFOG00015023759	chd2	100	72.129	ENSGGOG00000015677	CHD2	100	72.237	Gorilla_gorilla
ENSSFOG00015023759	chd2	100	82.996	ENSHBUG00000017947	chd2	100	83.160	Haplochromis_burtoni
ENSSFOG00015023759	chd2	100	72.752	ENSHGLG00000004435	CHD2	100	72.899	Heterocephalus_glaber_female
ENSSFOG00015023759	chd2	100	72.267	ENSHGLG00100016376	-	100	72.414	Heterocephalus_glaber_male
ENSSFOG00015023759	chd2	99	72.657	ENSHCOG00000008855	chd2	96	77.307	Hippocampus_comes
ENSSFOG00015023759	chd2	98	79.278	ENSIPUG00000000488	chd2	100	79.621	Ictalurus_punctatus
ENSSFOG00015023759	chd2	100	73.006	ENSSTOG00000001270	-	100	73.276	Ictidomys_tridecemlineatus
ENSSFOG00015023759	chd2	100	71.968	ENSJJAG00000000213	Chd2	100	72.022	Jaculus_jaculus
ENSSFOG00015023759	chd2	83	80.539	ENSKMAG00000015849	chd2	99	81.262	Kryptolebias_marmoratus
ENSSFOG00015023759	chd2	77	75.591	ENSLAFG00000016885	-	98	83.451	Loxodonta_africana
ENSSFOG00015023759	chd2	100	73.006	ENSMFAG00000033343	-	100	73.222	Macaca_fascicularis
ENSSFOG00015023759	chd2	100	73.006	ENSMMUG00000011782	-	100	73.222	Macaca_mulatta
ENSSFOG00015023759	chd2	100	72.766	ENSMNEG00000036875	-	100	72.982	Macaca_nemestrina
ENSSFOG00015023759	chd2	100	73.006	ENSMLEG00000035026	-	100	73.222	Mandrillus_leucophaeus
ENSSFOG00015023759	chd2	100	83.152	ENSMAMG00000009082	chd2	100	82.824	Mastacembelus_armatus
ENSSFOG00015023759	chd2	94	82.353	ENSMZEG00005021333	chd2	99	83.505	Maylandia_zebra
ENSSFOG00015023759	chd2	99	73.613	ENSMGAG00000008966	-	100	73.721	Meleagris_gallopavo
ENSSFOG00015023759	chd2	100	71.914	ENSMICG00000000332	-	100	71.860	Microcebus_murinus
ENSSFOG00015023759	chd2	100	72.845	ENSMOCG00000015124	Chd2	100	72.791	Microtus_ochrogaster
ENSSFOG00015023759	chd2	100	74.098	ENSMODG00000013158	-	100	73.613	Monodelphis_domestica
ENSSFOG00015023759	chd2	98	80.235	ENSMALG00000007755	chd2	97	83.425	Monopterus_albus
ENSSFOG00015023759	chd2	100	73.193	MGP_CAROLIEiJ_G0029860	Chd2	100	73.139	Mus_caroli
ENSSFOG00015023759	chd2	100	72.884	ENSMUSG00000078671	Chd2	100	73.100	Mus_musculus
ENSSFOG00015023759	chd2	100	73.193	MGP_PahariEiJ_G0013082	Chd2	100	73.139	Mus_pahari
ENSSFOG00015023759	chd2	100	73.208	MGP_SPRETEiJ_G0030962	Chd2	100	73.154	Mus_spretus
ENSSFOG00015023759	chd2	100	73.154	ENSMPUG00000017577	-	100	73.100	Mustela_putorius_furo
ENSSFOG00015023759	chd2	100	72.303	ENSMLUG00000009292	-	100	72.249	Myotis_lucifugus
ENSSFOG00015023759	chd2	100	72.992	ENSNGAG00000010792	Chd2	100	72.507	Nannospalax_galili
ENSSFOG00015023759	chd2	98	80.380	ENSNBRG00000020591	chd2	100	80.556	Neolamprologus_brichardi
ENSSFOG00015023759	chd2	100	71.067	ENSNLEG00000012349	-	100	71.444	Nomascus_leucogenys
ENSSFOG00015023759	chd2	72	78.553	ENSMEUG00000001522	-	72	78.553	Notamacropus_eugenii
ENSSFOG00015023759	chd2	100	72.309	ENSODEG00000016028	-	100	72.363	Octodon_degus
ENSSFOG00015023759	chd2	100	82.996	ENSONIG00000015136	chd2	100	83.160	Oreochromis_niloticus
ENSSFOG00015023759	chd2	87	71.277	ENSOANG00000004385	-	100	70.150	Ornithorhynchus_anatinus
ENSSFOG00015023759	chd2	100	68.037	ENSOCUG00000001628	-	99	77.033	Oryctolagus_cuniculus
ENSSFOG00015023759	chd2	100	80.327	ENSORLG00000008403	chd2	100	81.907	Oryzias_latipes
ENSSFOG00015023759	chd2	100	80.469	ENSORLG00020004138	chd2	100	82.106	Oryzias_latipes_hni
ENSSFOG00015023759	chd2	100	73.880	ENSOMEG00000005831	chd2	89	81.206	Oryzias_melastigma
ENSSFOG00015023759	chd2	100	71.175	ENSOGAG00000010399	-	100	71.175	Otolemur_garnettii
ENSSFOG00015023759	chd2	100	72.468	ENSOARG00000010343	-	100	72.629	Ovis_aries
ENSSFOG00015023759	chd2	100	71.614	ENSPPAG00000030381	-	100	71.706	Pan_paniscus
ENSSFOG00015023759	chd2	100	73.006	ENSPTRG00000007478	CHD2	100	73.222	Pan_troglodytes
ENSSFOG00015023759	chd2	100	70.420	ENSPANG00000033355	-	100	70.636	Papio_anubis
ENSSFOG00015023759	chd2	100	88.119	ENSPKIG00000000495	chd2	100	89.659	Paramormyrops_kingsleyae
ENSSFOG00015023759	chd2	83	78.190	ENSPMGG00000009941	chd2	99	77.930	Periophthalmus_magnuspinnatus
ENSSFOG00015023759	chd2	100	73.046	ENSPEMG00000019507	Chd2	100	72.727	Peromyscus_maniculatus_bairdii
ENSSFOG00015023759	chd2	91	76.097	ENSPCIG00000009417	-	98	78.947	Phascolarctos_cinereus
ENSSFOG00015023759	chd2	100	81.922	ENSPFOG00000007050	chd2	100	81.759	Poecilia_formosa
ENSSFOG00015023759	chd2	100	82.141	ENSPLAG00000005067	chd2	100	81.922	Poecilia_latipinna
ENSSFOG00015023759	chd2	100	81.977	ENSPMEG00000019628	chd2	100	81.813	Poecilia_mexicana
ENSSFOG00015023759	chd2	100	71.767	ENSPPYG00000006799	-	100	71.983	Pongo_abelii
ENSSFOG00015023759	chd2	100	73.222	ENSPCOG00000028084	-	100	73.060	Propithecus_coquereli
ENSSFOG00015023759	chd2	94	82.353	ENSPNYG00000010273	chd2	99	83.505	Pundamilia_nyererei
ENSSFOG00015023759	chd2	99	79.391	ENSPNAG00000016719	chd2	100	79.280	Pygocentrus_nattereri
ENSSFOG00015023759	chd2	100	73.585	ENSRNOG00000012716	Chd2	100	73.369	Rattus_norvegicus
ENSSFOG00015023759	chd2	100	71.575	ENSRBIG00000036875	-	100	71.791	Rhinopithecus_bieti
ENSSFOG00015023759	chd2	100	73.006	ENSRROG00000041087	-	100	73.222	Rhinopithecus_roxellana
ENSSFOG00015023759	chd2	100	73.046	ENSSBOG00000023754	-	100	73.261	Saimiri_boliviensis_boliviensis
ENSSFOG00015023759	chd2	100	74.260	ENSSHAG00000012513	-	100	73.883	Sarcophilus_harrisii
ENSSFOG00015023759	chd2	100	81.699	ENSSMAG00000001726	chd2	100	81.808	Scophthalmus_maximus
ENSSFOG00015023759	chd2	98	80.715	ENSSLDG00000001146	chd2	99	83.455	Seriola_lalandi_dorsalis
ENSSFOG00015023759	chd2	78	81.667	ENSSARG00000014112	-	81	81.667	Sorex_araneus
ENSSFOG00015023759	chd2	99	69.951	ENSSPUG00000011266	-	99	70.756	Sphenodon_punctatus
ENSSFOG00015023759	chd2	98	81.477	ENSSPAG00000016452	chd2	98	83.922	Stegastes_partitus
ENSSFOG00015023759	chd2	100	73.168	ENSSSCG00000002266	-	100	76.065	Sus_scrofa
ENSSFOG00015023759	chd2	96	74.101	ENSTGUG00000008540	-	100	73.125	Taeniopygia_guttata
ENSSFOG00015023759	chd2	88	78.725	ENSTRUG00000008842	chd2	91	78.790	Takifugu_rubripes
ENSSFOG00015023759	chd2	88	84.851	ENSTNIG00000010760	chd2	97	84.403	Tetraodon_nigroviridis
ENSSFOG00015023759	chd2	75	82.500	ENSTBEG00000017730	-	79	71.053	Tupaia_belangeri
ENSSFOG00015023759	chd2	90	75.918	ENSTTRG00000000430	-	90	75.982	Tursiops_truncatus
ENSSFOG00015023759	chd2	100	71.297	ENSUMAG00000000083	-	100	71.351	Ursus_maritimus
ENSSFOG00015023759	chd2	83	87.703	ENSVPAG00000009645	-	86	87.523	Vicugna_pacos
ENSSFOG00015023759	chd2	90	68.109	ENSXETG00000024129	chd2	94	76.872	Xenopus_tropicalis
ENSSFOG00015023759	chd2	96	81.132	ENSXCOG00000020255	chd2	100	81.132	Xiphophorus_couchianus
ENSSFOG00015023759	chd2	100	81.659	ENSXMAG00000002707	chd2	100	81.878	Xiphophorus_maculatus