EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015024101 (Gene tree)
Gene ID: 108930846
Gene Symbol: RBM47 (1 of many)
Alias: FLJ20273|NET18
Full Name: RNA-binding protein 47-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4438 bases
Position: chrKV410935.1:2262566-2267003
Accession: 108930846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015037858	RRM_1	PF00076.22	1.6e-31	1	2
ENSSFOP00015037858	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015038276	RBM47 (1 of many)-201	1737	XM_018746317	ENSSFOP00015037858	578 (aa)	XP_018601833	-

Gene Model

Click here to download ENSSFOG00015024101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015024101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015024101	RBM47	97	79.549	ENSSFOG00015012445	rbm47	98	78.716
ENSSFOG00015024101	RBM47	81	52.104	ENSSFOG00015011774	a1cf	90	52.705
ENSSFOG00015024101	RBM47	51	52.258	ENSSFOG00015001916	hnrnpr	50	51.592
ENSSFOG00015024101	RBM47	51	52.244	ENSSFOG00015010922	SYNCRIP	57	52.961
ENSSFOG00015024101	RBM47	51	66.447	ENSSFOG00015000087	rbm46	60	65.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015024101	RBM47	97	75.648	ENSG00000163694	RBM47	100	83.420	Homo_sapiens
ENSSFOG00015024101	RBM47	99	83.880	ENSAPOG00000011062	rbm47	99	78.608	Acanthochromis_polyacanthus
ENSSFOG00015024101	RBM47	97	75.086	ENSAMEG00000009672	RBM47	100	73.422	Ailuropoda_melanoleuca
ENSSFOG00015024101	RBM47	98	79.046	ENSACIG00000011531	rbm47	99	80.068	Amphilophus_citrinellus
ENSSFOG00015024101	RBM47	99	83.880	ENSAOCG00000022245	rbm47	99	80.272	Amphiprion_ocellaris
ENSSFOG00015024101	RBM47	99	83.880	ENSAPEG00000018304	rbm47	99	80.409	Amphiprion_percula
ENSSFOG00015024101	RBM47	99	79.933	ENSATEG00000018400	rbm47	98	79.933	Anabas_testudineus
ENSSFOG00015024101	RBM47	100	74.457	ENSAPLG00000013974	RBM47	98	75.125	Anas_platyrhynchos
ENSSFOG00015024101	RBM47	99	72.500	ENSACAG00000011833	RBM47	99	72.667	Anolis_carolinensis
ENSSFOG00015024101	RBM47	100	78.610	ENSANAG00000029440	RBM47	96	79.737	Aotus_nancymaae
ENSSFOG00015024101	RBM47	99	82.258	ENSACLG00000016902	rbm47	98	78.369	Astatotilapia_calliptera
ENSSFOG00015024101	RBM47	97	80.174	ENSAMXG00000021794	rbm47	98	79.027	Astyanax_mexicanus
ENSSFOG00015024101	RBM47	100	74.874	ENSBTAG00000002356	RBM47	100	75.377	Bos_taurus
ENSSFOG00015024101	RBM47	97	75.606	ENSCJAG00000019385	RBM47	96	79.737	Callithrix_jacchus
ENSSFOG00015024101	RBM47	96	75.826	ENSCAFG00000015898	RBM47	97	77.202	Canis_familiaris
ENSSFOG00015024101	RBM47	81	77.551	ENSCAFG00020010558	RBM47	87	78.745	Canis_lupus_dingo
ENSSFOG00015024101	RBM47	100	74.874	ENSCHIG00000026214	RBM47	100	75.377	Capra_hircus
ENSSFOG00015024101	RBM47	86	63.619	ENSTSYG00000033612	RBM47	93	63.619	Carlito_syrichta
ENSSFOG00015024101	RBM47	100	68.342	ENSCAPG00000008426	RBM47	100	69.347	Cavia_aperea
ENSSFOG00015024101	RBM47	100	79.841	ENSCPOG00000014100	RBM47	100	75.251	Cavia_porcellus
ENSSFOG00015024101	RBM47	99	54.795	ENSCCAG00000024397	-	99	55.651	Cebus_capucinus
ENSSFOG00015024101	RBM47	100	74.790	ENSCCAG00000030129	-	96	79.737	Cebus_capucinus
ENSSFOG00015024101	RBM47	97	76.440	ENSCATG00000042064	RBM47	98	78.238	Cercocebus_atys
ENSSFOG00015024101	RBM47	100	73.367	ENSCLAG00000001684	RBM47	100	81.013	Chinchilla_lanigera
ENSSFOG00015024101	RBM47	97	75.648	ENSCSAG00000017060	RBM47	100	74.791	Chlorocebus_sabaeus
ENSSFOG00015024101	RBM47	85	75.829	ENSCHOG00000011731	RBM47	88	74.376	Choloepus_hoffmanni
ENSSFOG00015024101	RBM47	100	75.874	ENSCPBG00000013831	RBM47	100	75.712	Chrysemys_picta_bellii
ENSSFOG00015024101	RBM47	97	81.742	ENSCANG00000019997	RBM47	98	78.238	Colobus_angolensis_palliatus
ENSSFOG00015024101	RBM47	100	72.591	ENSCGRG00001000623	-	100	73.090	Cricetulus_griseus_chok1gshd
ENSSFOG00015024101	RBM47	100	55.912	ENSCGRG00001020102	-	100	62.162	Cricetulus_griseus_chok1gshd
ENSSFOG00015024101	RBM47	100	71.927	ENSCGRG00000007762	-	100	80.380	Cricetulus_griseus_crigri
ENSSFOG00015024101	RBM47	99	56.345	ENSCGRG00000014760	-	99	62.712	Cricetulus_griseus_crigri
ENSSFOG00015024101	RBM47	96	78.163	ENSCSEG00000004545	rbm47	99	78.061	Cynoglossus_semilaevis
ENSSFOG00015024101	RBM47	99	78.365	ENSCVAG00000020144	rbm47	99	77.983	Cyprinodon_variegatus
ENSSFOG00015024101	RBM47	97	81.142	ENSDARG00000061985	rbm47	98	79.966	Danio_rerio
ENSSFOG00015024101	RBM47	97	75.742	ENSDNOG00000046854	RBM47	100	75.379	Dasypus_novemcinctus
ENSSFOG00015024101	RBM47	100	74.793	ENSDORG00000010144	Rbm47	100	74.793	Dipodomys_ordii
ENSSFOG00015024101	RBM47	97	75.430	ENSETEG00000009194	RBM47	97	75.945	Echinops_telfairi
ENSSFOG00015024101	RBM47	94	57.343	ENSEBUG00000011912	rbm47	95	58.217	Eptatretus_burgeri
ENSSFOG00015024101	RBM47	97	76.256	ENSEASG00005008443	RBM47	100	75.209	Equus_asinus_asinus
ENSSFOG00015024101	RBM47	97	76.256	ENSECAG00000004400	RBM47	100	75.209	Equus_caballus
ENSSFOG00015024101	RBM47	69	84.689	ENSEEUG00000001194	RBM47	75	79.913	Erinaceus_europaeus
ENSSFOG00015024101	RBM47	100	76.744	ENSELUG00000006148	rbm47	98	81.984	Esox_lucius
ENSSFOG00015024101	RBM47	97	76.696	ENSFCAG00000012399	RBM47	100	75.294	Felis_catus
ENSSFOG00015024101	RBM47	100	74.667	ENSFALG00000002861	RBM47	100	75.333	Ficedula_albicollis
ENSSFOG00015024101	RBM47	100	78.133	ENSFDAG00000016326	RBM47	100	73.322	Fukomys_damarensis
ENSSFOG00015024101	RBM47	99	77.211	ENSFHEG00000007938	rbm47	99	77.625	Fundulus_heteroclitus
ENSSFOG00015024101	RBM47	100	75.493	ENSGMOG00000014802	rbm47	98	75.000	Gadus_morhua
ENSSFOG00015024101	RBM47	62	81.117	ENSGALG00000014267	RBM47	97	81.915	Gallus_gallus
ENSSFOG00015024101	RBM47	61	82.597	ENSGAFG00000020571	rbm47	96	82.597	Gambusia_affinis
ENSSFOG00015024101	RBM47	97	78.374	ENSGACG00000016223	rbm47	95	79.239	Gasterosteus_aculeatus
ENSSFOG00015024101	RBM47	100	75.874	ENSGAGG00000020051	RBM47	100	75.712	Gopherus_agassizii
ENSSFOG00015024101	RBM47	97	76.440	ENSGGOG00000001367	RBM47	98	78.238	Gorilla_gorilla
ENSSFOG00015024101	RBM47	99	82.258	ENSHBUG00000003520	rbm47	98	78.109	Haplochromis_burtoni
ENSSFOG00015024101	RBM47	84	61.067	ENSHGLG00000016914	RBM47	100	80.380	Heterocephalus_glaber_female
ENSSFOG00015024101	RBM47	100	65.604	ENSHGLG00100003071	-	100	65.940	Heterocephalus_glaber_male
ENSSFOG00015024101	RBM47	100	72.651	ENSHGLG00100014028	-	100	80.380	Heterocephalus_glaber_male
ENSSFOG00015024101	RBM47	99	77.534	ENSHCOG00000002074	rbm47	99	78.378	Hippocampus_comes
ENSSFOG00015024101	RBM47	100	78.992	ENSIPUG00000004743	rbm47	97	81.690	Ictalurus_punctatus
ENSSFOG00015024101	RBM47	100	73.045	ENSSTOG00000004727	RBM47	100	79.114	Ictidomys_tridecemlineatus
ENSSFOG00015024101	RBM47	97	75.690	ENSJJAG00000013823	Rbm47	99	74.749	Jaculus_jaculus
ENSSFOG00015024101	RBM47	99	78.752	ENSKMAG00000000084	rbm47	99	79.431	Kryptolebias_marmoratus
ENSSFOG00015024101	RBM47	100	77.983	ENSLBEG00000008436	rbm47	100	77.983	Labrus_bergylta
ENSSFOG00015024101	RBM47	96	77.951	ENSLACG00000007196	RBM47	100	75.377	Latimeria_chalumnae
ENSSFOG00015024101	RBM47	97	83.709	ENSLOCG00000012966	rbm47	95	81.650	Lepisosteus_oculatus
ENSSFOG00015024101	RBM47	99	73.854	ENSLAFG00000011998	RBM47	99	74.363	Loxodonta_africana
ENSSFOG00015024101	RBM47	97	76.440	ENSMFAG00000037967	RBM47	98	78.238	Macaca_fascicularis
ENSSFOG00015024101	RBM47	97	75.648	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSSFOG00015024101	RBM47	97	76.440	ENSMNEG00000040774	RBM47	98	78.238	Macaca_nemestrina
ENSSFOG00015024101	RBM47	97	84.407	ENSMLEG00000041432	RBM47	100	81.270	Mandrillus_leucophaeus
ENSSFOG00015024101	RBM47	100	79.766	ENSMAMG00000019143	rbm47	98	83.289	Mastacembelus_armatus
ENSSFOG00015024101	RBM47	99	82.258	ENSMZEG00005023659	rbm47	98	78.369	Maylandia_zebra
ENSSFOG00015024101	RBM47	100	74.461	ENSMGAG00000012226	RBM47	100	75.124	Meleagris_gallopavo
ENSSFOG00015024101	RBM47	100	71.547	ENSMAUG00000006493	Rbm47	100	79.114	Mesocricetus_auratus
ENSSFOG00015024101	RBM47	96	75.880	ENSMICG00000026417	RBM47	96	76.801	Microcebus_murinus
ENSSFOG00015024101	RBM47	100	72.333	ENSMOCG00000021170	Rbm47	100	79.747	Microtus_ochrogaster
ENSSFOG00015024101	RBM47	100	79.097	ENSMMOG00000007260	rbm47	98	79.097	Mola_mola
ENSSFOG00015024101	RBM47	100	70.489	ENSMODG00000020561	-	99	70.995	Monodelphis_domestica
ENSSFOG00015024101	RBM47	52	74.684	ENSMODG00000015426	-	98	74.684	Monodelphis_domestica
ENSSFOG00015024101	RBM47	100	75.418	ENSMODG00000007003	RBM47	100	74.916	Monodelphis_domestica
ENSSFOG00015024101	RBM47	99	78.912	ENSMALG00000005167	rbm47	99	78.912	Monopterus_albus
ENSSFOG00015024101	RBM47	100	71.953	MGP_CAROLIEiJ_G0027258	Rbm47	100	78.481	Mus_caroli
ENSSFOG00015024101	RBM47	100	72.287	ENSMUSG00000070780	Rbm47	100	78.481	Mus_musculus
ENSSFOG00015024101	RBM47	100	72.287	MGP_PahariEiJ_G0017040	Rbm47	100	79.114	Mus_pahari
ENSSFOG00015024101	RBM47	100	72.651	MGP_SPRETEiJ_G0028253	Rbm47	100	78.481	Mus_spretus
ENSSFOG00015024101	RBM47	96	75.433	ENSMPUG00000006177	RBM47	94	74.457	Mustela_putorius_furo
ENSSFOG00015024101	RBM47	100	73.367	ENSMLUG00000000889	RBM47	100	74.037	Myotis_lucifugus
ENSSFOG00015024101	RBM47	100	72.379	ENSNGAG00000003325	Rbm47	100	73.045	Nannospalax_galili
ENSSFOG00015024101	RBM47	99	77.500	ENSNBRG00000015092	rbm47	98	78.405	Neolamprologus_brichardi
ENSSFOG00015024101	RBM47	97	76.091	ENSNLEG00000017151	RBM47	95	80.481	Nomascus_leucogenys
ENSSFOG00015024101	RBM47	71	78.220	ENSMEUG00000009516	-	99	78.220	Notamacropus_eugenii
ENSSFOG00015024101	RBM47	71	86.486	ENSOPRG00000016507	-	74	80.753	Ochotona_princeps
ENSSFOG00015024101	RBM47	100	73.367	ENSODEG00000004873	RBM47	100	74.874	Octodon_degus
ENSSFOG00015024101	RBM47	98	79.623	ENSONIG00000009061	rbm47	98	78.369	Oreochromis_niloticus
ENSSFOG00015024101	RBM47	96	77.273	ENSOANG00000008978	RBM47	99	75.676	Ornithorhynchus_anatinus
ENSSFOG00015024101	RBM47	97	76.471	ENSOCUG00000012034	RBM47	97	76.990	Oryctolagus_cuniculus
ENSSFOG00015024101	RBM47	100	82.540	ENSORLG00000005847	rbm47	98	82.540	Oryzias_latipes
ENSSFOG00015024101	RBM47	100	82.540	ENSORLG00020005154	rbm47	98	82.540	Oryzias_latipes_hni
ENSSFOG00015024101	RBM47	100	82.804	ENSORLG00015000066	rbm47	98	82.804	Oryzias_latipes_hsok
ENSSFOG00015024101	RBM47	100	79.599	ENSOMEG00000010730	rbm47	99	80.546	Oryzias_melastigma
ENSSFOG00015024101	RBM47	96	70.383	ENSOGAG00000025193	-	100	69.580	Otolemur_garnettii
ENSSFOG00015024101	RBM47	97	76.511	ENSOGAG00000029367	-	100	75.125	Otolemur_garnettii
ENSSFOG00015024101	RBM47	100	66.164	ENSOARG00000012711	RBM47	100	67.672	Ovis_aries
ENSSFOG00015024101	RBM47	97	76.440	ENSPPAG00000029763	RBM47	98	78.238	Pan_paniscus
ENSSFOG00015024101	RBM47	97	74.783	ENSPPRG00000012873	RBM47	100	73.445	Panthera_pardus
ENSSFOG00015024101	RBM47	85	72.763	ENSPTIG00000017046	RBM47	100	72.962	Panthera_tigris_altaica
ENSSFOG00015024101	RBM47	97	76.440	ENSPTRG00000016006	RBM47	98	78.238	Pan_troglodytes
ENSSFOG00015024101	RBM47	97	76.440	ENSPANG00000005980	RBM47	98	78.238	Papio_anubis
ENSSFOG00015024101	RBM47	96	79.965	ENSPKIG00000013431	RBM47	97	80.141	Paramormyrops_kingsleyae
ENSSFOG00015024101	RBM47	97	78.510	ENSPKIG00000005037	rbm47	99	77.365	Paramormyrops_kingsleyae
ENSSFOG00015024101	RBM47	88	77.652	ENSPSIG00000017516	RBM47	97	77.652	Pelodiscus_sinensis
ENSSFOG00015024101	RBM47	96	80.279	ENSPMGG00000018540	rbm47	99	79.831	Periophthalmus_magnuspinnatus
ENSSFOG00015024101	RBM47	100	72.213	ENSPEMG00000011088	Rbm47	100	73.544	Peromyscus_maniculatus_bairdii
ENSSFOG00015024101	RBM47	99	77.027	ENSPFOG00000007997	rbm47	98	76.033	Poecilia_formosa
ENSSFOG00015024101	RBM47	99	77.157	ENSPLAG00000002072	rbm47	98	76.159	Poecilia_latipinna
ENSSFOG00015024101	RBM47	98	77.929	ENSPMEG00000017492	rbm47	99	77.929	Poecilia_mexicana
ENSSFOG00015024101	RBM47	99	78.209	ENSPREG00000008456	rbm47	99	83.471	Poecilia_reticulata
ENSSFOG00015024101	RBM47	97	66.156	ENSPPYG00000014688	RBM47	99	66.327	Pongo_abelii
ENSSFOG00015024101	RBM47	81	79.597	ENSPCAG00000011879	RBM47	80	80.353	Procavia_capensis
ENSSFOG00015024101	RBM47	96	76.091	ENSPCOG00000023451	RBM47	99	75.042	Propithecus_coquereli
ENSSFOG00015024101	RBM47	100	74.000	ENSPVAG00000003812	RBM47	100	74.333	Pteropus_vampyrus
ENSSFOG00015024101	RBM47	99	77.076	ENSPNYG00000022868	rbm47	98	77.980	Pundamilia_nyererei
ENSSFOG00015024101	RBM47	97	81.217	ENSPNAG00000007940	rbm47	98	79.530	Pygocentrus_nattereri
ENSSFOG00015024101	RBM47	100	72.287	ENSRNOG00000002408	Rbm47	100	73.456	Rattus_norvegicus
ENSSFOG00015024101	RBM47	97	81.742	ENSRBIG00000039601	RBM47	98	78.238	Rhinopithecus_bieti
ENSSFOG00015024101	RBM47	97	81.742	ENSRROG00000044696	RBM47	98	78.238	Rhinopithecus_roxellana
ENSSFOG00015024101	RBM47	100	72.081	ENSSBOG00000028475	RBM47	100	77.433	Saimiri_boliviensis_boliviensis
ENSSFOG00015024101	RBM47	100	75.336	ENSSHAG00000017576	RBM47	100	75.503	Sarcophilus_harrisii
ENSSFOG00015024101	RBM47	100	77.554	ENSSMAG00000009744	rbm47	98	77.554	Scophthalmus_maximus
ENSSFOG00015024101	RBM47	100	79.530	ENSSDUG00000022684	rbm47	100	79.530	Seriola_dumerili
ENSSFOG00015024101	RBM47	99	79.966	ENSSLDG00000003109	rbm47	99	79.865	Seriola_lalandi_dorsalis
ENSSFOG00015024101	RBM47	84	78.125	ENSSARG00000001735	RBM47	84	78.714	Sorex_araneus
ENSSFOG00015024101	RBM47	100	78.457	ENSSPUG00000007515	RBM47	100	78.877	Sphenodon_punctatus
ENSSFOG00015024101	RBM47	99	84.973	ENSSPAG00000001257	rbm47	99	81.229	Stegastes_partitus
ENSSFOG00015024101	RBM47	97	76.430	ENSSSCG00000008796	RBM47	100	75.042	Sus_scrofa
ENSSFOG00015024101	RBM47	99	75.671	ENSTGUG00000008705	RBM47	98	76.342	Taeniopygia_guttata
ENSSFOG00015024101	RBM47	97	79.896	ENSTRUG00000014050	rbm47	99	79.896	Takifugu_rubripes
ENSSFOG00015024101	RBM47	100	79.062	ENSTNIG00000006127	rbm47	98	79.062	Tetraodon_nigroviridis
ENSSFOG00015024101	RBM47	74	81.073	ENSTBEG00000001607	RBM47	76	77.807	Tupaia_belangeri
ENSSFOG00015024101	RBM47	97	76.696	ENSTTRG00000002839	RBM47	100	75.462	Tursiops_truncatus
ENSSFOG00015024101	RBM47	97	76.166	ENSUAMG00000021346	RBM47	100	74.791	Ursus_americanus
ENSSFOG00015024101	RBM47	54	85.714	ENSVPAG00000000641	-	57	78.767	Vicugna_pacos
ENSSFOG00015024101	RBM47	96	75.958	ENSVVUG00000014774	RBM47	97	76.817	Vulpes_vulpes
ENSSFOG00015024101	RBM47	100	72.788	ENSXETG00000012802	rbm47	100	73.122	Xenopus_tropicalis
ENSSFOG00015024101	RBM47	86	82.320	ENSXCOG00000000780	rbm47	99	66.093	Xiphophorus_couchianus
ENSSFOG00015024101	RBM47	99	76.910	ENSXMAG00000009874	rbm47	99	77.133	Xiphophorus_maculatus