EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015024204 (Gene tree)
Gene ID: 108926813
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3955 bases
Position: chrKV410860.1:102225-106179
Accession: 108926813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015038040	RNA_pol_Rpb4	PF03874.16	7.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015038459	-	2802	XM_018739766	ENSSFOP00015038040	144 (aa)	XP_018595282	A0A0P7U9V5

Gene Model

Click here to download ENSSFOG00015024204's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015024204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015024204	polr2d	100	91.667	ENSG00000144231	POLR2D	100	97.115	Homo_sapiens
ENSSFOG00015024204	polr2d	100	93.056	ENSAPOG00000023553	polr2d	91	98.473	Acanthochromis_polyacanthus
ENSSFOG00015024204	polr2d	100	90.411	ENSAMEG00000011746	POLR2D	92	94.737	Ailuropoda_melanoleuca
ENSSFOG00015024204	polr2d	100	93.056	ENSAOCG00000007295	polr2d	91	98.473	Amphiprion_ocellaris
ENSSFOG00015024204	polr2d	100	93.056	ENSAPEG00000018714	polr2d	91	98.473	Amphiprion_percula
ENSSFOG00015024204	polr2d	100	93.750	ENSATEG00000020416	polr2d	91	97.710	Anabas_testudineus
ENSSFOG00015024204	polr2d	100	92.361	ENSACAG00000005255	POLR2D	92	96.947	Anolis_carolinensis
ENSSFOG00015024204	polr2d	100	91.667	ENSANAG00000019959	POLR2D	92	96.183	Aotus_nancymaae
ENSSFOG00015024204	polr2d	100	93.056	ENSACLG00000009919	polr2d	88	73.282	Astatotilapia_calliptera
ENSSFOG00015024204	polr2d	99	97.183	ENSAMXG00000008954	polr2d	99	97.183	Astyanax_mexicanus
ENSSFOG00015024204	polr2d	99	92.958	ENSBTAG00000053244	POLR2D	92	96.183	Bos_taurus
ENSSFOG00015024204	polr2d	98	57.343	WBGene00018391	rpb-4	91	60.305	Caenorhabditis_elegans
ENSSFOG00015024204	polr2d	100	90.972	ENSCJAG00000021814	-	92	95.420	Callithrix_jacchus
ENSSFOG00015024204	polr2d	100	91.667	ENSCJAG00000042216	-	92	96.183	Callithrix_jacchus
ENSSFOG00015024204	polr2d	100	91.667	ENSCAFG00000004311	POLR2D	92	96.183	Canis_familiaris
ENSSFOG00015024204	polr2d	100	91.667	ENSCAFG00020003617	POLR2D	92	96.183	Canis_lupus_dingo
ENSSFOG00015024204	polr2d	100	90.972	ENSCHIG00000025995	POLR2D	92	96.183	Capra_hircus
ENSSFOG00015024204	polr2d	81	95.726	ENSTSYG00000036021	POLR2D	100	95.726	Carlito_syrichta
ENSSFOG00015024204	polr2d	100	90.972	ENSCPOG00000002571	POLR2D	92	95.420	Cavia_porcellus
ENSSFOG00015024204	polr2d	100	91.667	ENSCCAG00000037709	POLR2D	92	96.183	Cebus_capucinus
ENSSFOG00015024204	polr2d	100	91.667	ENSCATG00000036749	POLR2D	92	96.183	Cercocebus_atys
ENSSFOG00015024204	polr2d	100	90.972	ENSCLAG00000004449	POLR2D	92	95.420	Chinchilla_lanigera
ENSSFOG00015024204	polr2d	100	91.667	ENSCSAG00000016861	POLR2D	92	96.183	Chlorocebus_sabaeus
ENSSFOG00015024204	polr2d	81	96.581	ENSCHOG00000013850	POLR2D	100	96.581	Choloepus_hoffmanni
ENSSFOG00015024204	polr2d	89	87.500	ENSCING00000011474	-	96	87.500	Ciona_intestinalis
ENSSFOG00015024204	polr2d	94	84.444	ENSCSAVG00000008353	-	88	88.281	Ciona_savignyi
ENSSFOG00015024204	polr2d	100	91.667	ENSCANG00000043665	POLR2D	92	96.183	Colobus_angolensis_palliatus
ENSSFOG00015024204	polr2d	100	91.667	ENSCGRG00001013608	Polr2d	92	96.183	Cricetulus_griseus_chok1gshd
ENSSFOG00015024204	polr2d	81	96.581	ENSCGRG00000012624	Polr2d	100	96.581	Cricetulus_griseus_crigri
ENSSFOG00015024204	polr2d	100	93.056	ENSCSEG00000006147	polr2d	91	97.710	Cynoglossus_semilaevis
ENSSFOG00015024204	polr2d	100	93.056	ENSCVAG00000000779	polr2d	91	97.710	Cyprinodon_variegatus
ENSSFOG00015024204	polr2d	100	95.833	ENSDARG00000076509	polr2d	100	95.833	Danio_rerio
ENSSFOG00015024204	polr2d	100	91.667	ENSDNOG00000008527	POLR2D	92	96.183	Dasypus_novemcinctus
ENSSFOG00015024204	polr2d	100	91.667	ENSDORG00000026897	Polr2d	92	96.183	Dipodomys_ordii
ENSSFOG00015024204	polr2d	97	76.259	FBgn0263757	Rpb4	94	80.000	Drosophila_melanogaster
ENSSFOG00015024204	polr2d	92	96.212	ENSEBUG00000007675	polr2d	93	96.212	Eptatretus_burgeri
ENSSFOG00015024204	polr2d	99	92.958	ENSEASG00005007103	POLR2D	92	96.183	Equus_asinus_asinus
ENSSFOG00015024204	polr2d	100	91.667	ENSECAG00000000556	POLR2D	92	96.183	Equus_caballus
ENSSFOG00015024204	polr2d	99	94.366	ENSELUG00000005928	polr2d	92	99.237	Esox_lucius
ENSSFOG00015024204	polr2d	100	91.667	ENSFCAG00000027816	POLR2D	92	96.183	Felis_catus
ENSSFOG00015024204	polr2d	100	91.667	ENSFALG00000003528	POLR2D	92	96.947	Ficedula_albicollis
ENSSFOG00015024204	polr2d	100	90.972	ENSFDAG00000007217	POLR2D	92	95.420	Fukomys_damarensis
ENSSFOG00015024204	polr2d	100	94.444	ENSGMOG00000001823	polr2d	91	98.473	Gadus_morhua
ENSSFOG00015024204	polr2d	100	90.972	ENSGALG00000002057	POLR2D	92	96.947	Gallus_gallus
ENSSFOG00015024204	polr2d	100	93.750	ENSGAFG00000016932	polr2d	65	98.473	Gambusia_affinis
ENSSFOG00015024204	polr2d	100	92.361	ENSGACG00000004639	polr2d	91	96.183	Gasterosteus_aculeatus
ENSSFOG00015024204	polr2d	100	91.667	ENSGAGG00000021308	POLR2D	92	96.947	Gopherus_agassizii
ENSSFOG00015024204	polr2d	100	91.667	ENSGGOG00000004723	POLR2D	92	96.183	Gorilla_gorilla
ENSSFOG00015024204	polr2d	100	90.972	ENSHGLG00000016570	Polr2d	92	95.420	Heterocephalus_glaber_female
ENSSFOG00015024204	polr2d	100	90.972	ENSHGLG00100013785	Polr2d	92	95.420	Heterocephalus_glaber_male
ENSSFOG00015024204	polr2d	100	91.667	ENSHCOG00000006425	polr2d	92	95.420	Hippocampus_comes
ENSSFOG00015024204	polr2d	100	95.139	ENSIPUG00000011192	polr2d	100	95.139	Ictalurus_punctatus
ENSSFOG00015024204	polr2d	100	89.583	ENSSTOG00000023329	POLR2D	92	93.893	Ictidomys_tridecemlineatus
ENSSFOG00015024204	polr2d	81	90.598	ENSJJAG00000005723	-	94	90.598	Jaculus_jaculus
ENSSFOG00015024204	polr2d	100	90.972	ENSJJAG00000015053	-	92	96.183	Jaculus_jaculus
ENSSFOG00015024204	polr2d	100	83.333	ENSJJAG00000000783	-	92	88.550	Jaculus_jaculus
ENSSFOG00015024204	polr2d	85	94.262	ENSKMAG00000010677	polr2d	68	94.262	Kryptolebias_marmoratus
ENSSFOG00015024204	polr2d	100	94.444	ENSLACG00000017253	POLR2D	92	98.473	Latimeria_chalumnae
ENSSFOG00015024204	polr2d	100	95.139	ENSLOCG00000009106	polr2d	91	99.237	Lepisosteus_oculatus
ENSSFOG00015024204	polr2d	100	91.667	ENSLAFG00000001848	POLR2D	92	96.183	Loxodonta_africana
ENSSFOG00015024204	polr2d	100	91.667	ENSMFAG00000031937	POLR2D	92	96.183	Macaca_fascicularis
ENSSFOG00015024204	polr2d	100	91.667	ENSMMUG00000001989	POLR2D	92	96.183	Macaca_mulatta
ENSSFOG00015024204	polr2d	100	91.667	ENSMNEG00000035505	POLR2D	92	96.183	Macaca_nemestrina
ENSSFOG00015024204	polr2d	100	91.667	ENSMLEG00000035827	POLR2D	92	96.183	Mandrillus_leucophaeus
ENSSFOG00015024204	polr2d	100	90.972	ENSMGAG00000001248	POLR2D	92	96.947	Meleagris_gallopavo
ENSSFOG00015024204	polr2d	100	90.972	ENSMAUG00000014518	Polr2d	92	95.420	Mesocricetus_auratus
ENSSFOG00015024204	polr2d	100	90.972	ENSMICG00000009931	POLR2D	92	95.420	Microcebus_murinus
ENSSFOG00015024204	polr2d	100	88.889	ENSMOCG00000019367	Polr2d	92	93.130	Microtus_ochrogaster
ENSSFOG00015024204	polr2d	100	77.778	ENSMODG00000025027	-	92	81.538	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.083	ENSMODG00000025029	-	92	80.769	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.778	ENSMODG00000025028	-	92	81.538	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	92.361	ENSMODG00000018653	-	92	96.947	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.778	ENSMODG00000025026	-	92	81.538	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.083	ENSMODG00000025036	-	92	80.769	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.083	ENSMODG00000025034	-	92	80.769	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.083	ENSMODG00000025035	-	92	80.769	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	76.389	ENSMODG00000025032	-	92	80.000	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.083	ENSMODG00000025033	-	92	80.769	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.778	ENSMODG00000025030	-	92	81.538	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	77.083	ENSMODG00000025031	-	92	80.769	Monodelphis_domestica
ENSSFOG00015024204	polr2d	100	93.056	ENSMALG00000018266	polr2d	91	97.710	Monopterus_albus
ENSSFOG00015024204	polr2d	100	91.667	MGP_CAROLIEiJ_G0022066	Polr2d	92	96.183	Mus_caroli
ENSSFOG00015024204	polr2d	100	91.667	ENSMUSG00000024258	Polr2d	92	96.183	Mus_musculus
ENSSFOG00015024204	polr2d	100	91.667	MGP_PahariEiJ_G0018800	Polr2d	92	96.183	Mus_pahari
ENSSFOG00015024204	polr2d	100	91.667	MGP_SPRETEiJ_G0022977	Polr2d	92	96.183	Mus_spretus
ENSSFOG00015024204	polr2d	100	91.667	ENSMPUG00000016685	POLR2D	92	96.183	Mustela_putorius_furo
ENSSFOG00015024204	polr2d	82	96.610	ENSMLUG00000006862	POLR2D	100	96.610	Myotis_lucifugus
ENSSFOG00015024204	polr2d	100	91.667	ENSNGAG00000014862	Polr2d	92	96.183	Nannospalax_galili
ENSSFOG00015024204	polr2d	100	91.667	ENSNLEG00000027191	POLR2D	92	96.183	Nomascus_leucogenys
ENSSFOG00015024204	polr2d	81	95.726	ENSOPRG00000005327	POLR2D	100	95.726	Ochotona_princeps
ENSSFOG00015024204	polr2d	100	90.972	ENSODEG00000005262	POLR2D	92	95.420	Octodon_degus
ENSSFOG00015024204	polr2d	100	93.750	ENSONIG00000017290	polr2d	91	98.473	Oreochromis_niloticus
ENSSFOG00015024204	polr2d	82	97.458	ENSOANG00000013216	POLR2D	100	97.458	Ornithorhynchus_anatinus
ENSSFOG00015024204	polr2d	100	86.207	ENSOCUG00000021449	-	92	89.394	Oryctolagus_cuniculus
ENSSFOG00015024204	polr2d	100	90.278	ENSOCUG00000023403	-	92	94.656	Oryctolagus_cuniculus
ENSSFOG00015024204	polr2d	100	93.056	ENSORLG00000005266	polr2d	91	96.947	Oryzias_latipes
ENSSFOG00015024204	polr2d	100	93.056	ENSORLG00020006647	polr2d	91	96.947	Oryzias_latipes_hni
ENSSFOG00015024204	polr2d	100	93.056	ENSORLG00015003222	polr2d	91	96.947	Oryzias_latipes_hsok
ENSSFOG00015024204	polr2d	100	93.056	ENSOMEG00000018915	polr2d	91	96.947	Oryzias_melastigma
ENSSFOG00015024204	polr2d	100	89.726	ENSOGAG00000017118	POLR2D	92	93.985	Otolemur_garnettii
ENSSFOG00015024204	polr2d	100	90.972	ENSOARG00000015995	POLR2D	92	96.183	Ovis_aries
ENSSFOG00015024204	polr2d	100	91.667	ENSPPRG00000020222	POLR2D	92	96.183	Panthera_pardus
ENSSFOG00015024204	polr2d	100	91.667	ENSPTIG00000018618	POLR2D	92	96.183	Panthera_tigris_altaica
ENSSFOG00015024204	polr2d	100	91.667	ENSPTRG00000012436	POLR2D	92	96.183	Pan_troglodytes
ENSSFOG00015024204	polr2d	100	91.667	ENSPANG00000018602	POLR2D	92	96.183	Papio_anubis
ENSSFOG00015024204	polr2d	100	97.917	ENSPKIG00000012166	polr2d	100	97.917	Paramormyrops_kingsleyae
ENSSFOG00015024204	polr2d	82	97.458	ENSPSIG00000002873	POLR2D	100	97.458	Pelodiscus_sinensis
ENSSFOG00015024204	polr2d	100	91.667	ENSPEMG00000018244	Polr2d	92	96.183	Peromyscus_maniculatus_bairdii
ENSSFOG00015024204	polr2d	100	88.194	ENSPMAG00000005021	polr2d	92	92.366	Petromyzon_marinus
ENSSFOG00015024204	polr2d	100	93.750	ENSPFOG00000008969	polr2d	91	98.473	Poecilia_formosa
ENSSFOG00015024204	polr2d	100	93.750	ENSPLAG00000017210	polr2d	91	98.473	Poecilia_latipinna
ENSSFOG00015024204	polr2d	100	93.750	ENSPMEG00000005160	polr2d	91	98.473	Poecilia_mexicana
ENSSFOG00015024204	polr2d	72	98.077	ENSPREG00000021862	polr2d	100	98.077	Poecilia_reticulata
ENSSFOG00015024204	polr2d	100	91.667	ENSPPYG00000012759	POLR2D	92	96.183	Pongo_abelii
ENSSFOG00015024204	polr2d	100	91.667	ENSPCAG00000001396	POLR2D	92	96.183	Procavia_capensis
ENSSFOG00015024204	polr2d	100	90.972	ENSPCOG00000022076	POLR2D	92	95.420	Propithecus_coquereli
ENSSFOG00015024204	polr2d	100	91.667	ENSPVAG00000004002	POLR2D	92	96.183	Pteropus_vampyrus
ENSSFOG00015024204	polr2d	99	96.479	ENSPNAG00000018246	polr2d	99	96.479	Pygocentrus_nattereri
ENSSFOG00015024204	polr2d	100	91.667	ENSRNOG00000016231	Polr2d	92	96.183	Rattus_norvegicus
ENSSFOG00015024204	polr2d	100	91.667	ENSRBIG00000039326	POLR2D	92	96.183	Rhinopithecus_bieti
ENSSFOG00015024204	polr2d	100	91.667	ENSRROG00000023289	POLR2D	92	96.183	Rhinopithecus_roxellana
ENSSFOG00015024204	polr2d	100	91.667	ENSSHAG00000014817	-	92	96.947	Sarcophilus_harrisii
ENSSFOG00015024204	polr2d	100	93.056	ENSSDUG00000006060	polr2d	91	97.710	Seriola_dumerili
ENSSFOG00015024204	polr2d	92	97.744	ENSSLDG00000024485	polr2d	90	97.710	Seriola_lalandi_dorsalis
ENSSFOG00015024204	polr2d	81	95.726	ENSSARG00000009037	POLR2D	100	95.726	Sorex_araneus
ENSSFOG00015024204	polr2d	100	90.972	ENSSPUG00000014915	POLR2D	92	96.947	Sphenodon_punctatus
ENSSFOG00015024204	polr2d	100	93.750	ENSSPAG00000013386	polr2d	91	98.473	Stegastes_partitus
ENSSFOG00015024204	polr2d	100	91.667	ENSSSCG00000039230	POLR2D	92	96.183	Sus_scrofa
ENSSFOG00015024204	polr2d	100	90.972	ENSTGUG00000005773	POLR2D	92	96.947	Taeniopygia_guttata
ENSSFOG00015024204	polr2d	100	94.444	ENSTRUG00000004740	polr2d	92	98.473	Takifugu_rubripes
ENSSFOG00015024204	polr2d	100	95.139	ENSTNIG00000011210	polr2d	92	98.473	Tetraodon_nigroviridis
ENSSFOG00015024204	polr2d	81	96.581	ENSTBEG00000006081	POLR2D	100	96.581	Tupaia_belangeri
ENSSFOG00015024204	polr2d	81	96.581	ENSTTRG00000010055	POLR2D	100	96.581	Tursiops_truncatus
ENSSFOG00015024204	polr2d	90	96.124	ENSUAMG00000024374	POLR2D	98	96.124	Ursus_americanus
ENSSFOG00015024204	polr2d	83	95.833	ENSUMAG00000008280	POLR2D	100	97.115	Ursus_maritimus
ENSSFOG00015024204	polr2d	81	96.581	ENSVPAG00000007239	POLR2D	100	96.581	Vicugna_pacos
ENSSFOG00015024204	polr2d	100	91.667	ENSVVUG00000008616	POLR2D	92	96.183	Vulpes_vulpes
ENSSFOG00015024204	polr2d	100	89.583	ENSXETG00000002955	polr2d	92	93.893	Xenopus_tropicalis
ENSSFOG00015024204	polr2d	72	98.077	ENSXCOG00000012668	polr2d	100	98.077	Xiphophorus_couchianus
ENSSFOG00015024204	polr2d	72	98.077	ENSXMAG00000014031	polr2d	100	98.077	Xiphophorus_maculatus