EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000000013 (Gene tree)
Gene ID: 100923514
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 71546 bases
Position: chrGL856803.1:2-71547
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000012	SpoU_methylase	PF00588.19	1.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000013	TARBP1-201	4068	-	ENSSHAP00000000012	1355 (aa)	-	G3VA08

Gene Model

Click here to download ENSSHAG00000000013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000013	TARBP1	100	75.755	ENSG00000059588	TARBP1	83	75.755	Homo_sapiens
ENSSHAG00000000013	TARBP1	99	45.329	ENSAPOG00000016419	si:dkey-85a20.4	83	45.329	Acanthochromis_polyacanthus
ENSSHAG00000000013	TARBP1	100	74.595	ENSAMEG00000003359	TARBP1	99	74.595	Ailuropoda_melanoleuca
ENSSHAG00000000013	TARBP1	99	44.898	ENSATEG00000020266	si:dkey-85a20.4	83	45.044	Anabas_testudineus
ENSSHAG00000000013	TARBP1	99	68.960	ENSAPLG00000007666	TARBP1	99	70.365	Anas_platyrhynchos
ENSSHAG00000000013	TARBP1	98	62.752	ENSACAG00000001142	TARBP1	83	62.752	Anolis_carolinensis
ENSSHAG00000000013	TARBP1	100	73.029	ENSANAG00000022031	TARBP1	86	73.029	Aotus_nancymaae
ENSSHAG00000000013	TARBP1	99	75.536	ENSBTAG00000004517	TARBP1	81	79.804	Bos_taurus
ENSSHAG00000000013	TARBP1	100	75.682	ENSCJAG00000018155	TARBP1	83	75.682	Callithrix_jacchus
ENSSHAG00000000013	TARBP1	100	75.037	ENSCAFG00000011533	TARBP1	96	75.037	Canis_familiaris
ENSSHAG00000000013	TARBP1	100	75.037	ENSCAFG00020027141	TARBP1	83	75.037	Canis_lupus_dingo
ENSSHAG00000000013	TARBP1	99	74.742	ENSCHIG00000011437	TARBP1	83	74.742	Capra_hircus
ENSSHAG00000000013	TARBP1	99	73.462	ENSTSYG00000010382	TARBP1	99	73.684	Carlito_syrichta
ENSSHAG00000000013	TARBP1	94	62.267	ENSCAPG00000010831	TARBP1	99	62.315	Cavia_aperea
ENSSHAG00000000013	TARBP1	99	70.571	ENSCPOG00000013995	TARBP1	84	70.645	Cavia_porcellus
ENSSHAG00000000013	TARBP1	100	75.829	ENSCCAG00000037278	TARBP1	83	75.829	Cebus_capucinus
ENSSHAG00000000013	TARBP1	100	75.461	ENSCATG00000011754	TARBP1	83	75.461	Cercocebus_atys
ENSSHAG00000000013	TARBP1	97	71.233	ENSCLAG00000003655	TARBP1	96	71.309	Chinchilla_lanigera
ENSSHAG00000000013	TARBP1	95	75.619	ENSCSAG00000010100	TARBP1	99	75.619	Chlorocebus_sabaeus
ENSSHAG00000000013	TARBP1	94	71.249	ENSCPBG00000005587	TARBP1	83	73.810	Chrysemys_picta_bellii
ENSSHAG00000000013	TARBP1	100	75.387	ENSCANG00000034343	TARBP1	99	75.387	Colobus_angolensis_palliatus
ENSSHAG00000000013	TARBP1	99	69.568	ENSCGRG00001016690	Tarbp1	85	69.568	Cricetulus_griseus_chok1gshd
ENSSHAG00000000013	TARBP1	99	69.568	ENSCGRG00000016893	Tarbp1	91	69.568	Cricetulus_griseus_crigri
ENSSHAG00000000013	TARBP1	97	45.923	ENSCSEG00000005255	si:dkey-85a20.4	83	46.163	Cynoglossus_semilaevis
ENSSHAG00000000013	TARBP1	99	45.827	ENSDARG00000079055	si:dkey-85a20.4	99	55.043	Danio_rerio
ENSSHAG00000000013	TARBP1	99	76.050	ENSDNOG00000008637	TARBP1	82	76.492	Dasypus_novemcinctus
ENSSHAG00000000013	TARBP1	96	66.103	ENSDORG00000007984	Tarbp1	100	66.103	Dipodomys_ordii
ENSSHAG00000000013	TARBP1	99	76.571	ENSEASG00005000252	TARBP1	84	76.571	Equus_asinus_asinus
ENSSHAG00000000013	TARBP1	99	76.423	ENSECAG00000023673	TARBP1	83	76.571	Equus_caballus
ENSSHAG00000000013	TARBP1	99	44.760	ENSELUG00000012193	si:dkey-85a20.4	84	44.541	Esox_lucius
ENSSHAG00000000013	TARBP1	100	72.553	ENSFCAG00000014183	TARBP1	83	71.891	Felis_catus
ENSSHAG00000000013	TARBP1	96	69.396	ENSFALG00000013565	TARBP1	99	69.406	Ficedula_albicollis
ENSSHAG00000000013	TARBP1	95	68.237	ENSFDAG00000001308	TARBP1	99	68.313	Fukomys_damarensis
ENSSHAG00000000013	TARBP1	95	51.515	ENSFHEG00000007565	si:dkey-85a20.4	83	51.515	Fundulus_heteroclitus
ENSSHAG00000000013	TARBP1	99	43.179	ENSGMOG00000004549	si:dkey-85a20.4	98	43.251	Gadus_morhua
ENSSHAG00000000013	TARBP1	99	64.438	ENSGALG00000011000	TARBP1	84	64.438	Gallus_gallus
ENSSHAG00000000013	TARBP1	99	44.873	ENSGAFG00000007387	si:dkey-85a20.4	83	44.873	Gambusia_affinis
ENSSHAG00000000013	TARBP1	99	43.764	ENSGACG00000005865	si:dkey-85a20.4	96	43.764	Gasterosteus_aculeatus
ENSSHAG00000000013	TARBP1	100	73.216	ENSGAGG00000012102	TARBP1	87	73.216	Gopherus_agassizii
ENSSHAG00000000013	TARBP1	100	72.941	ENSGGOG00000022879	TARBP1	98	72.941	Gorilla_gorilla
ENSSHAG00000000013	TARBP1	99	46.237	ENSHBUG00000008877	si:dkey-85a20.4	83	46.237	Haplochromis_burtoni
ENSSHAG00000000013	TARBP1	99	71.609	ENSHGLG00000011592	TARBP1	84	71.683	Heterocephalus_glaber_female
ENSSHAG00000000013	TARBP1	99	71.460	ENSHGLG00100015169	TARBP1	93	71.460	Heterocephalus_glaber_male
ENSSHAG00000000013	TARBP1	98	43.709	ENSIPUG00000005249	si:dkey-85a20.4	81	43.709	Ictalurus_punctatus
ENSSHAG00000000013	TARBP1	99	68.671	ENSSTOG00000032291	TARBP1	96	68.894	Ictidomys_tridecemlineatus
ENSSHAG00000000013	TARBP1	99	65.504	ENSJJAG00000017840	Tarbp1	93	65.607	Jaculus_jaculus
ENSSHAG00000000013	TARBP1	77	48.598	ENSKMAG00000017546	si:dkey-85a20.4	69	48.725	Kryptolebias_marmoratus
ENSSHAG00000000013	TARBP1	77	50.931	ENSLBEG00000012132	si:dkey-85a20.4	73	50.931	Labrus_bergylta
ENSSHAG00000000013	TARBP1	99	55.882	ENSLACG00000004337	TARBP1	83	55.882	Latimeria_chalumnae
ENSSHAG00000000013	TARBP1	99	51.429	ENSLOCG00000016214	si:dkey-85a20.4	83	51.320	Lepisosteus_oculatus
ENSSHAG00000000013	TARBP1	99	75.941	ENSLAFG00000011394	TARBP1	86	75.941	Loxodonta_africana
ENSSHAG00000000013	TARBP1	100	73.122	ENSMFAG00000041068	TARBP1	84	73.122	Macaca_fascicularis
ENSSHAG00000000013	TARBP1	100	73.270	ENSMMUG00000021703	TARBP1	83	73.270	Macaca_mulatta
ENSSHAG00000000013	TARBP1	100	75.313	ENSMNEG00000045002	TARBP1	83	75.313	Macaca_nemestrina
ENSSHAG00000000013	TARBP1	100	75.461	ENSMLEG00000044182	TARBP1	99	75.461	Mandrillus_leucophaeus
ENSSHAG00000000013	TARBP1	99	45.236	ENSMAMG00000021760	si:dkey-85a20.4	84	45.236	Mastacembelus_armatus
ENSSHAG00000000013	TARBP1	99	46.366	ENSMZEG00005005751	si:dkey-85a20.4	83	46.366	Maylandia_zebra
ENSSHAG00000000013	TARBP1	99	68.429	ENSMAUG00000020968	Tarbp1	85	68.429	Mesocricetus_auratus
ENSSHAG00000000013	TARBP1	99	67.797	ENSMICG00000015280	TARBP1	81	67.926	Microcebus_murinus
ENSSHAG00000000013	TARBP1	99	68.718	ENSMOCG00000004128	Tarbp1	85	68.718	Microtus_ochrogaster
ENSSHAG00000000013	TARBP1	99	43.469	ENSMMOG00000007795	si:dkey-85a20.4	82	43.396	Mola_mola
ENSSHAG00000000013	TARBP1	99	88.996	ENSMODG00000008504	TARBP1	82	88.996	Monodelphis_domestica
ENSSHAG00000000013	TARBP1	99	45.118	ENSMALG00000002916	si:dkey-85a20.4	83	45.118	Monopterus_albus
ENSSHAG00000000013	TARBP1	99	68.429	MGP_CAROLIEiJ_G0031729	Tarbp1	78	76.357	Mus_caroli
ENSSHAG00000000013	TARBP1	99	68.378	ENSMUSG00000090290	Tarbp1	85	68.378	Mus_musculus
ENSSHAG00000000013	TARBP1	99	68.894	MGP_PahariEiJ_G0023326	Tarbp1	85	68.894	Mus_pahari
ENSSHAG00000000013	TARBP1	99	68.452	MGP_SPRETEiJ_G0032846	Tarbp1	85	68.452	Mus_spretus
ENSSHAG00000000013	TARBP1	92	73.697	ENSMPUG00000002802	TARBP1	99	73.697	Mustela_putorius_furo
ENSSHAG00000000013	TARBP1	99	68.112	ENSMLUG00000002414	TARBP1	98	68.112	Myotis_lucifugus
ENSSHAG00000000013	TARBP1	100	75.608	ENSNLEG00000002518	TARBP1	83	75.608	Nomascus_leucogenys
ENSSHAG00000000013	TARBP1	63	93.750	ENSMEUG00000011370	-	53	93.750	Notamacropus_eugenii
ENSSHAG00000000013	TARBP1	79	78.405	ENSOPRG00000013822	TARBP1	65	78.246	Ochotona_princeps
ENSSHAG00000000013	TARBP1	99	70.719	ENSODEG00000005238	TARBP1	87	70.867	Octodon_degus
ENSSHAG00000000013	TARBP1	99	45.981	ENSONIG00000009789	si:dkey-85a20.4	96	45.981	Oreochromis_niloticus
ENSSHAG00000000013	TARBP1	99	74.684	ENSOCUG00000017418	TARBP1	82	74.684	Oryctolagus_cuniculus
ENSSHAG00000000013	TARBP1	99	43.157	ENSORLG00000010529	si:dkey-85a20.4	82	43.355	Oryzias_latipes
ENSSHAG00000000013	TARBP1	99	42.950	ENSORLG00020019264	si:dkey-85a20.4	82	43.147	Oryzias_latipes_hni
ENSSHAG00000000013	TARBP1	99	43.137	ENSORLG00015003276	si:dkey-85a20.4	82	43.336	Oryzias_latipes_hsok
ENSSHAG00000000013	TARBP1	99	72.593	ENSOGAG00000002379	TARBP1	83	72.593	Otolemur_garnettii
ENSSHAG00000000013	TARBP1	99	74.410	ENSOARG00000003434	TARBP1	89	74.410	Ovis_aries
ENSSHAG00000000013	TARBP1	100	75.755	ENSPPAG00000028097	TARBP1	99	75.755	Pan_paniscus
ENSSHAG00000000013	TARBP1	100	71.891	ENSPPRG00000013561	TARBP1	87	71.649	Panthera_pardus
ENSSHAG00000000013	TARBP1	99	75.259	ENSPTIG00000009281	TARBP1	99	75.259	Panthera_tigris_altaica
ENSSHAG00000000013	TARBP1	100	75.682	ENSPTRG00000002124	TARBP1	83	75.682	Pan_troglodytes
ENSSHAG00000000013	TARBP1	100	75.461	ENSPANG00000021933	TARBP1	83	75.461	Papio_anubis
ENSSHAG00000000013	TARBP1	99	46.488	ENSPKIG00000016716	si:dkey-85a20.4	82	46.488	Paramormyrops_kingsleyae
ENSSHAG00000000013	TARBP1	95	72.411	ENSPSIG00000010699	TARBP1	100	72.411	Pelodiscus_sinensis
ENSSHAG00000000013	TARBP1	99	68.848	ENSPEMG00000006888	Tarbp1	89	68.848	Peromyscus_maniculatus_bairdii
ENSSHAG00000000013	TARBP1	90	95.146	ENSPCIG00000029710	TARBP1	82	95.146	Phascolarctos_cinereus
ENSSHAG00000000013	TARBP1	99	44.469	ENSPFOG00000013020	si:dkey-85a20.4	96	44.541	Poecilia_formosa
ENSSHAG00000000013	TARBP1	99	44.758	ENSPLAG00000006044	si:dkey-85a20.4	83	44.758	Poecilia_latipinna
ENSSHAG00000000013	TARBP1	99	44.865	ENSPMEG00000017857	si:dkey-85a20.4	83	44.785	Poecilia_mexicana
ENSSHAG00000000013	TARBP1	99	45.250	ENSPREG00000022753	si:dkey-85a20.4	83	45.250	Poecilia_reticulata
ENSSHAG00000000013	TARBP1	89	75.789	ENSPPYG00000000102	TARBP1	82	75.789	Pongo_abelii
ENSSHAG00000000013	TARBP1	82	88.000	ENSPCAG00000004808	TARBP1	69	88.000	Procavia_capensis
ENSSHAG00000000013	TARBP1	99	72.889	ENSPCOG00000005666	TARBP1	83	72.889	Propithecus_coquereli
ENSSHAG00000000013	TARBP1	99	59.941	ENSPVAG00000014798	TARBP1	84	59.941	Pteropus_vampyrus
ENSSHAG00000000013	TARBP1	99	45.135	ENSPNYG00000019135	si:dkey-85a20.4	83	45.135	Pundamilia_nyererei
ENSSHAG00000000013	TARBP1	99	63.988	ENSRNOG00000053574	Tarbp1	85	63.988	Rattus_norvegicus
ENSSHAG00000000013	TARBP1	100	70.228	ENSRBIG00000043362	TARBP1	91	70.228	Rhinopithecus_bieti
ENSSHAG00000000013	TARBP1	100	75.166	ENSRROG00000029527	TARBP1	87	75.221	Rhinopithecus_roxellana
ENSSHAG00000000013	TARBP1	100	75.534	ENSSBOG00000034503	TARBP1	96	75.534	Saimiri_boliviensis_boliviensis
ENSSHAG00000000013	TARBP1	99	44.982	ENSSFOG00015002660	si:dkey-85a20.4	98	46.012	Scleropages_formosus
ENSSHAG00000000013	TARBP1	99	45.541	ENSSMAG00000007081	si:dkey-85a20.4	81	45.614	Scophthalmus_maximus
ENSSHAG00000000013	TARBP1	99	44.150	ENSSDUG00000023566	si:dkey-85a20.4	83	44.314	Seriola_dumerili
ENSSHAG00000000013	TARBP1	99	45.700	ENSSLDG00000020200	si:dkey-85a20.4	83	45.773	Seriola_lalandi_dorsalis
ENSSHAG00000000013	TARBP1	91	82.258	ENSSARG00000012207	TARBP1	76	82.258	Sorex_araneus
ENSSHAG00000000013	TARBP1	99	69.027	ENSSPUG00000015364	TARBP1	84	69.027	Sphenodon_punctatus
ENSSHAG00000000013	TARBP1	99	44.888	ENSSPAG00000007213	si:dkey-85a20.4	83	44.888	Stegastes_partitus
ENSSHAG00000000013	TARBP1	99	75.167	ENSSSCG00000010160	TARBP1	82	76.582	Sus_scrofa
ENSSHAG00000000013	TARBP1	96	69.641	ENSTGUG00000010214	TARBP1	100	69.641	Taeniopygia_guttata
ENSSHAG00000000013	TARBP1	99	44.145	ENSTNIG00000016586	si:dkey-85a20.4	98	44.404	Tetraodon_nigroviridis
ENSSHAG00000000013	TARBP1	94	72.379	ENSTTRG00000008707	TARBP1	82	72.379	Tursiops_truncatus
ENSSHAG00000000013	TARBP1	98	74.419	ENSUMAG00000006730	TARBP1	99	74.419	Ursus_maritimus
ENSSHAG00000000013	TARBP1	86	81.250	ENSVPAG00000007665	TARBP1	80	81.250	Vicugna_pacos
ENSSHAG00000000013	TARBP1	100	75.110	ENSVVUG00000007460	TARBP1	99	73.978	Vulpes_vulpes
ENSSHAG00000000013	TARBP1	99	56.337	ENSXETG00000016224	tarbp1	99	56.328	Xenopus_tropicalis
ENSSHAG00000000013	TARBP1	90	49.595	ENSXCOG00000011779	si:dkey-85a20.4	90	49.595	Xiphophorus_couchianus
ENSSHAG00000000013	TARBP1	78	43.043	ENSXMAG00000009600	si:dkey-85a20.4	100	43.043	Xiphophorus_maculatus