EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2746 bases
Position: chrGL841030.1:21-2766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000069	RRM_1	PF00076.22	6e-12	1	1
ENSSHAP00000000068	RRM_1	PF00076.22	6.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000071	-	934	-	ENSSHAP00000000069	309 (aa)	-	G3VA65
ENSSHAT00000000070	-	1294	-	ENSSHAP00000000068	423 (aa)	-	G3VA64

Gene Model

Click here to download ENSSHAG00000000063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000063	-	97	37.500	ENSSHAG00000018204	HNRNPH1	77	37.113
ENSSHAG00000000063	-	99	71.839	ENSSHAG00000017554	-	98	71.839
ENSSHAG00000000063	-	99	40.741	ENSSHAG00000012803	-	79	40.741
ENSSHAG00000000063	-	96	33.571	ENSSHAG00000006390	-	98	33.333
ENSSHAG00000000063	-	98	33.784	ENSSHAG00000015335	RBM12B	53	33.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000063	-	99	62.834	ENSAOCG00000017713	esrp2	53	84.756	Amphiprion_ocellaris
ENSSHAG00000000063	-	99	63.093	ENSCSEG00000011686	esrp2	53	84.146	Cynoglossus_semilaevis
ENSSHAG00000000063	-	99	63.599	ENSCVAG00000004170	esrp2	53	84.146	Cyprinodon_variegatus
ENSSHAG00000000063	-	99	65.768	ENSDARG00000018814	esrp2	70	64.938	Danio_rerio
ENSSHAG00000000063	-	99	62.168	ENSFHEG00000012728	esrp2	53	84.146	Fundulus_heteroclitus
ENSSHAG00000000063	-	100	67.789	ENSGALG00000003374	ESRP2	54	87.195	Gallus_gallus
ENSSHAG00000000063	-	99	62.805	ENSGAFG00000009225	esrp2	52	83.537	Gambusia_affinis
ENSSHAG00000000063	-	99	61.711	ENSGACG00000016359	esrp2	70	60.896	Gasterosteus_aculeatus
ENSSHAG00000000063	-	99	65.424	ENSLOCG00000008062	esrp2	53	85.976	Lepisosteus_oculatus
ENSSHAG00000000063	-	99	77.483	ENSPKIG00000021343	esrp2	53	65.432	Paramormyrops_kingsleyae
ENSSHAG00000000063	-	99	63.115	ENSPLAG00000016250	esrp2	53	83.537	Poecilia_latipinna
ENSSHAG00000000063	-	99	62.069	ENSPREG00000002991	esrp2	53	83.537	Poecilia_reticulata
ENSSHAG00000000063	-	99	62.474	ENSTRUG00000007941	esrp2	53	82.927	Takifugu_rubripes