EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000110 (Gene tree)
Gene ID: 100933333
Gene Symbol: RAD54L
Alias: RAD54A|hHR54|hRAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 18652 bases
Position: chrGL857605.1:21-18672
Accession: 9826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000124	ResIII	PF04851.15	1.4e-09	1	1
ENSSHAP00000000124	DEAD	PF00270.29	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000127	RAD54L-201	2636	-	ENSSHAP00000000124	746 (aa)	-	G3VAC0

Gene Model

Click here to download ENSSHAG00000000110's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000110	RAD54L	67	30.785	ENSSHAG00000017395	CHD1L	50	30.785
ENSSHAG00000000110	RAD54L	85	43.433	ENSSHAG00000017038	-	71	43.433

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000110	RAD54L	99	87.333	ENSG00000085999	RAD54L	100	93.333	Homo_sapiens
ENSSHAG00000000110	RAD54L	99	77.493	ENSAPOG00000011643	rad54l	99	77.493	Acanthochromis_polyacanthus
ENSSHAG00000000110	RAD54L	99	87.049	ENSAMEG00000013902	RAD54L	99	87.049	Ailuropoda_melanoleuca
ENSSHAG00000000110	RAD54L	99	78.523	ENSACIG00000001939	rad54l	99	78.523	Amphilophus_citrinellus
ENSSHAG00000000110	RAD54L	99	80.458	ENSAOCG00000017576	rad54l	99	80.458	Amphiprion_ocellaris
ENSSHAG00000000110	RAD54L	94	81.935	ENSAPEG00000020658	rad54l	97	81.935	Amphiprion_percula
ENSSHAG00000000110	RAD54L	94	82.077	ENSATEG00000006767	rad54l	99	82.077	Anabas_testudineus
ENSSHAG00000000110	RAD54L	94	88.730	ENSAPLG00000006389	RAD54L	99	88.730	Anas_platyrhynchos
ENSSHAG00000000110	RAD54L	99	85.274	ENSACAG00000002312	RAD54L	99	85.274	Anolis_carolinensis
ENSSHAG00000000110	RAD54L	99	87.200	ENSANAG00000035439	RAD54L	99	87.200	Aotus_nancymaae
ENSSHAG00000000110	RAD54L	100	78.016	ENSACLG00000018711	rad54l	100	78.016	Astatotilapia_calliptera
ENSSHAG00000000110	RAD54L	99	81.611	ENSAMXG00000012777	rad54l	99	81.611	Astyanax_mexicanus
ENSSHAG00000000110	RAD54L	99	87.717	ENSBTAG00000019901	RAD54L	99	87.717	Bos_taurus
ENSSHAG00000000110	RAD54L	93	58.417	WBGene00004298	rad-54	84	58.417	Caenorhabditis_elegans
ENSSHAG00000000110	RAD54L	97	87.396	ENSCJAG00000021080	RAD54L	94	86.749	Callithrix_jacchus
ENSSHAG00000000110	RAD54L	99	87.467	ENSCAFG00000004272	RAD54L	99	87.467	Canis_familiaris
ENSSHAG00000000110	RAD54L	99	87.450	ENSCAFG00020015066	RAD54L	99	87.450	Canis_lupus_dingo
ENSSHAG00000000110	RAD54L	99	87.717	ENSCHIG00000020118	RAD54L	99	87.717	Capra_hircus
ENSSHAG00000000110	RAD54L	99	85.752	ENSTSYG00000002032	RAD54L	99	85.752	Carlito_syrichta
ENSSHAG00000000110	RAD54L	99	87.867	ENSCPOG00000006768	RAD54L	99	87.867	Cavia_porcellus
ENSSHAG00000000110	RAD54L	99	87.600	ENSCCAG00000025783	RAD54L	99	87.600	Cebus_capucinus
ENSSHAG00000000110	RAD54L	99	87.333	ENSCATG00000030589	RAD54L	99	87.333	Cercocebus_atys
ENSSHAG00000000110	RAD54L	99	88.400	ENSCLAG00000004645	RAD54L	99	88.400	Chinchilla_lanigera
ENSSHAG00000000110	RAD54L	99	87.333	ENSCSAG00000001229	RAD54L	99	87.333	Chlorocebus_sabaeus
ENSSHAG00000000110	RAD54L	99	86.479	ENSCPBG00000005675	RAD54L	99	86.479	Chrysemys_picta_bellii
ENSSHAG00000000110	RAD54L	99	62.839	ENSCING00000024456	-	99	62.887	Ciona_intestinalis
ENSSHAG00000000110	RAD54L	99	63.802	ENSCSAVG00000010859	-	99	63.719	Ciona_savignyi
ENSSHAG00000000110	RAD54L	99	87.333	ENSCANG00000034891	RAD54L	99	87.333	Colobus_angolensis_palliatus
ENSSHAG00000000110	RAD54L	99	86.533	ENSCGRG00001014807	Rad54l	99	86.533	Cricetulus_griseus_chok1gshd
ENSSHAG00000000110	RAD54L	99	86.533	ENSCGRG00000016038	Rad54l	99	86.533	Cricetulus_griseus_crigri
ENSSHAG00000000110	RAD54L	99	78.091	ENSCSEG00000001983	rad54l	99	78.091	Cynoglossus_semilaevis
ENSSHAG00000000110	RAD54L	87	83.200	ENSCVAG00000019561	rad54l	99	83.200	Cyprinodon_variegatus
ENSSHAG00000000110	RAD54L	100	80.240	ENSDARG00000018623	rad54l	100	80.240	Danio_rerio
ENSSHAG00000000110	RAD54L	99	87.200	ENSDNOG00000003395	RAD54L	99	87.200	Dasypus_novemcinctus
ENSSHAG00000000110	RAD54L	99	78.336	ENSDORG00000002632	Rad54l	99	78.468	Dipodomys_ordii
ENSSHAG00000000110	RAD54L	99	54.271	FBgn0002989	okr	95	54.271	Drosophila_melanogaster
ENSSHAG00000000110	RAD54L	78	86.087	ENSETEG00000000550	RAD54L	78	86.087	Echinops_telfairi
ENSSHAG00000000110	RAD54L	99	87.183	ENSEASG00005004511	RAD54L	99	87.450	Equus_asinus_asinus
ENSSHAG00000000110	RAD54L	99	87.600	ENSECAG00000008760	RAD54L	99	87.867	Equus_caballus
ENSSHAG00000000110	RAD54L	99	82.353	ENSEEUG00000008113	RAD54L	99	82.353	Erinaceus_europaeus
ENSSHAG00000000110	RAD54L	100	80.641	ENSELUG00000002295	rad54l	100	80.641	Esox_lucius
ENSSHAG00000000110	RAD54L	99	86.933	ENSFCAG00000003444	RAD54L	99	86.933	Felis_catus
ENSSHAG00000000110	RAD54L	99	86.595	ENSFALG00000009480	RAD54L	99	87.015	Ficedula_albicollis
ENSSHAG00000000110	RAD54L	99	87.733	ENSFDAG00000007806	RAD54L	99	87.733	Fukomys_damarensis
ENSSHAG00000000110	RAD54L	61	76.991	ENSFHEG00000009824	rad54l	82	73.542	Fundulus_heteroclitus
ENSSHAG00000000110	RAD54L	99	79.597	ENSGMOG00000014568	rad54l	100	79.597	Gadus_morhua
ENSSHAG00000000110	RAD54L	99	87.517	ENSGALG00000010356	RAD54L	92	87.517	Gallus_gallus
ENSSHAG00000000110	RAD54L	91	78.676	ENSGAFG00000011110	rad54l	100	78.676	Gambusia_affinis
ENSSHAG00000000110	RAD54L	100	78.983	ENSGACG00000003111	rad54l	98	78.983	Gasterosteus_aculeatus
ENSSHAG00000000110	RAD54L	99	85.791	ENSGAGG00000014089	RAD54L	96	85.791	Gopherus_agassizii
ENSSHAG00000000110	RAD54L	99	87.200	ENSGGOG00000010602	RAD54L	99	87.200	Gorilla_gorilla
ENSSHAG00000000110	RAD54L	100	78.284	ENSHBUG00000007793	rad54l	100	78.284	Haplochromis_burtoni
ENSSHAG00000000110	RAD54L	99	87.333	ENSHGLG00000000753	RAD54L	99	87.333	Heterocephalus_glaber_female
ENSSHAG00000000110	RAD54L	99	87.200	ENSHGLG00100016987	RAD54L	99	87.200	Heterocephalus_glaber_male
ENSSHAG00000000110	RAD54L	100	79.494	ENSIPUG00000015999	rad54l	100	82.403	Ictalurus_punctatus
ENSSHAG00000000110	RAD54L	99	87.032	ENSSTOG00000029125	RAD54L	99	87.032	Ictidomys_tridecemlineatus
ENSSHAG00000000110	RAD54L	99	73.600	ENSJJAG00000000235	-	99	73.467	Jaculus_jaculus
ENSSHAG00000000110	RAD54L	99	79.542	ENSKMAG00000009944	rad54l	99	79.542	Kryptolebias_marmoratus
ENSSHAG00000000110	RAD54L	99	80.485	ENSLBEG00000014617	rad54l	97	82.938	Labrus_bergylta
ENSSHAG00000000110	RAD54L	100	82.329	ENSLOCG00000004144	rad54l	100	83.309	Lepisosteus_oculatus
ENSSHAG00000000110	RAD54L	99	87.049	ENSLAFG00000007583	RAD54L	99	87.450	Loxodonta_africana
ENSSHAG00000000110	RAD54L	99	87.467	ENSMFAG00000031241	RAD54L	99	87.467	Macaca_fascicularis
ENSSHAG00000000110	RAD54L	99	87.467	ENSMMUG00000011568	RAD54L	99	87.467	Macaca_mulatta
ENSSHAG00000000110	RAD54L	99	87.333	ENSMNEG00000038562	RAD54L	99	87.333	Macaca_nemestrina
ENSSHAG00000000110	RAD54L	99	87.467	ENSMLEG00000038145	RAD54L	99	87.467	Mandrillus_leucophaeus
ENSSHAG00000000110	RAD54L	99	79.357	ENSMAMG00000022180	rad54l	100	82.232	Mastacembelus_armatus
ENSSHAG00000000110	RAD54L	100	77.882	ENSMZEG00005018081	rad54l	100	77.882	Maylandia_zebra
ENSSHAG00000000110	RAD54L	99	87.500	ENSMGAG00000010634	RAD54L	99	87.500	Meleagris_gallopavo
ENSSHAG00000000110	RAD54L	99	86.000	ENSMAUG00000020076	Rad54l	99	86.000	Mesocricetus_auratus
ENSSHAG00000000110	RAD54L	99	87.733	ENSMICG00000003266	RAD54L	99	87.733	Microcebus_murinus
ENSSHAG00000000110	RAD54L	99	87.067	ENSMOCG00000001778	Rad54l	99	87.067	Microtus_ochrogaster
ENSSHAG00000000110	RAD54L	99	76.729	ENSMALG00000021148	rad54l	99	76.729	Monopterus_albus
ENSSHAG00000000110	RAD54L	99	82.750	MGP_CAROLIEiJ_G0026325	Rad54l	99	82.750	Mus_caroli
ENSSHAG00000000110	RAD54L	99	87.467	ENSMUSG00000028702	Rad54l	99	87.467	Mus_musculus
ENSSHAG00000000110	RAD54L	99	86.933	MGP_PahariEiJ_G0028657	Rad54l	99	86.933	Mus_pahari
ENSSHAG00000000110	RAD54L	99	87.600	MGP_SPRETEiJ_G0027297	Rad54l	99	87.600	Mus_spretus
ENSSHAG00000000110	RAD54L	99	86.800	ENSMPUG00000012883	RAD54L	99	86.800	Mustela_putorius_furo
ENSSHAG00000000110	RAD54L	99	88.385	ENSMLUG00000003763	RAD54L	99	88.385	Myotis_lucifugus
ENSSHAG00000000110	RAD54L	99	86.000	ENSNGAG00000024213	Rad54l	99	86.000	Nannospalax_galili
ENSSHAG00000000110	RAD54L	99	86.898	ENSNLEG00000016548	RAD54L	99	86.898	Nomascus_leucogenys
ENSSHAG00000000110	RAD54L	91	91.124	ENSMEUG00000006793	RAD54L	100	91.124	Notamacropus_eugenii
ENSSHAG00000000110	RAD54L	90	86.411	ENSOPRG00000016016	RAD54L	90	86.411	Ochotona_princeps
ENSSHAG00000000110	RAD54L	99	87.733	ENSODEG00000008519	RAD54L	99	87.733	Octodon_degus
ENSSHAG00000000110	RAD54L	100	78.016	ENSONIG00000007659	rad54l	100	78.016	Oreochromis_niloticus
ENSSHAG00000000110	RAD54L	99	86.898	ENSOCUG00000005229	RAD54L	99	86.898	Oryctolagus_cuniculus
ENSSHAG00000000110	RAD54L	99	79.167	ENSORLG00000002958	rad54l	99	79.704	Oryzias_latipes
ENSSHAG00000000110	RAD54L	99	79.839	ENSORLG00020006554	rad54l	99	82.991	Oryzias_latipes_hni
ENSSHAG00000000110	RAD54L	99	79.704	ENSORLG00015002907	rad54l	99	79.839	Oryzias_latipes_hsok
ENSSHAG00000000110	RAD54L	99	79.839	ENSOMEG00000007770	rad54l	99	79.839	Oryzias_melastigma
ENSSHAG00000000110	RAD54L	99	87.750	ENSOARG00000002264	RAD54L	99	87.750	Ovis_aries
ENSSHAG00000000110	RAD54L	99	87.200	ENSPPAG00000031222	RAD54L	99	87.200	Pan_paniscus
ENSSHAG00000000110	RAD54L	99	86.933	ENSPPRG00000010317	RAD54L	99	86.933	Panthera_pardus
ENSSHAG00000000110	RAD54L	99	86.933	ENSPTIG00000012200	RAD54L	99	86.933	Panthera_tigris_altaica
ENSSHAG00000000110	RAD54L	99	87.200	ENSPTRG00000000689	RAD54L	99	87.200	Pan_troglodytes
ENSSHAG00000000110	RAD54L	99	87.467	ENSPANG00000016295	RAD54L	99	87.467	Papio_anubis
ENSSHAG00000000110	RAD54L	99	77.554	ENSPKIG00000016172	rad54l	99	77.554	Paramormyrops_kingsleyae
ENSSHAG00000000110	RAD54L	99	86.585	ENSPSIG00000003258	RAD54L	99	86.585	Pelodiscus_sinensis
ENSSHAG00000000110	RAD54L	99	75.436	ENSPMGG00000016335	rad54l	99	75.436	Periophthalmus_magnuspinnatus
ENSSHAG00000000110	RAD54L	99	87.200	ENSPEMG00000011422	Rad54l	99	87.200	Peromyscus_maniculatus_bairdii
ENSSHAG00000000110	RAD54L	99	71.237	ENSPMAG00000007719	rad54l	99	71.237	Petromyzon_marinus
ENSSHAG00000000110	RAD54L	100	94.236	ENSPCIG00000029032	RAD54L	100	94.236	Phascolarctos_cinereus
ENSSHAG00000000110	RAD54L	85	81.162	ENSPFOG00000013732	rad54l	99	81.162	Poecilia_formosa
ENSSHAG00000000110	RAD54L	82	79.612	ENSPLAG00000023416	rad54l	99	79.612	Poecilia_latipinna
ENSSHAG00000000110	RAD54L	91	79.118	ENSPMEG00000008299	rad54l	100	79.118	Poecilia_mexicana
ENSSHAG00000000110	RAD54L	100	77.480	ENSPREG00000019955	rad54l	100	77.480	Poecilia_reticulata
ENSSHAG00000000110	RAD54L	99	73.901	ENSPPYG00000001398	RAD54L	99	74.567	Pongo_abelii
ENSSHAG00000000110	RAD54L	80	86.893	ENSPCAG00000005323	RAD54L	80	86.893	Procavia_capensis
ENSSHAG00000000110	RAD54L	99	87.867	ENSPCOG00000015423	RAD54L	99	87.867	Propithecus_coquereli
ENSSHAG00000000110	RAD54L	99	74.403	ENSPNYG00000002942	rad54l	99	74.403	Pundamilia_nyererei
ENSSHAG00000000110	RAD54L	100	80.563	ENSPNAG00000012483	rad54l	100	80.563	Pygocentrus_nattereri
ENSSHAG00000000110	RAD54L	99	86.933	ENSRNOG00000013148	Rad54l	99	86.933	Rattus_norvegicus
ENSSHAG00000000110	RAD54L	99	87.333	ENSRBIG00000043495	RAD54L	99	87.333	Rhinopithecus_bieti
ENSSHAG00000000110	RAD54L	99	87.467	ENSRROG00000020844	RAD54L	99	87.467	Rhinopithecus_roxellana
ENSSHAG00000000110	RAD54L	80	48.837	YGL163C	RAD54	71	48.992	Saccharomyces_cerevisiae
ENSSHAG00000000110	RAD54L	99	87.467	ENSSBOG00000024672	RAD54L	99	87.467	Saimiri_boliviensis_boliviensis
ENSSHAG00000000110	RAD54L	100	79.893	ENSSDUG00000019147	rad54l	100	79.893	Seriola_dumerili
ENSSHAG00000000110	RAD54L	100	80.161	ENSSLDG00000012330	rad54l	100	80.161	Seriola_lalandi_dorsalis
ENSSHAG00000000110	RAD54L	84	83.840	ENSSARG00000006689	RAD54L	100	83.840	Sorex_araneus
ENSSHAG00000000110	RAD54L	99	79.273	ENSSPAG00000011016	rad54l	99	79.273	Stegastes_partitus
ENSSHAG00000000110	RAD54L	99	86.933	ENSSSCG00000003905	RAD54L	99	86.933	Sus_scrofa
ENSSHAG00000000110	RAD54L	99	85.657	ENSTGUG00000008233	RAD54L	99	85.791	Taeniopygia_guttata
ENSSHAG00000000110	RAD54L	99	76.273	ENSTRUG00000008410	rad54l	99	76.273	Takifugu_rubripes
ENSSHAG00000000110	RAD54L	99	76.376	ENSTNIG00000004716	rad54l	99	77.078	Tetraodon_nigroviridis
ENSSHAG00000000110	RAD54L	99	81.150	ENSTTRG00000006315	RAD54L	99	81.150	Tursiops_truncatus
ENSSHAG00000000110	RAD54L	99	86.577	ENSUAMG00000011824	RAD54L	99	86.577	Ursus_americanus
ENSSHAG00000000110	RAD54L	99	85.503	ENSUMAG00000023603	RAD54L	99	85.503	Ursus_maritimus
ENSSHAG00000000110	RAD54L	99	87.333	ENSVVUG00000007201	RAD54L	99	87.333	Vulpes_vulpes
ENSSHAG00000000110	RAD54L	96	78.999	ENSXETG00000004369	rad54l	100	78.999	Xenopus_tropicalis
ENSSHAG00000000110	RAD54L	55	75.121	ENSXCOG00000016028	rad54l	84	75.121	Xiphophorus_couchianus