EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000000333 (Gene tree)
Gene ID: 100935355
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 40337 bases
Position: chrGL834989.1:534-40870
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000378	IBN_N	PF03810.19	1.1e-10	1	1
ENSSHAP00000000379	IBN_N	PF03810.19	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000384	-	1401	-	ENSSHAP00000000379	467 (aa)	-	G3VB25
ENSSHAT00000000383	-	1473	-	ENSSHAP00000000378	491 (aa)	-	G3VB24

Gene Model

Click here to download ENSSHAG00000000333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000333	-	100	89.079	ENSG00000204764	RANBP17	100	92.105	Homo_sapiens
ENSSHAG00000000333	-	99	68.507	ENSG00000130227	XPO7	96	62.088	Homo_sapiens
ENSSHAG00000000333	-	100	87.984	ENSAMEG00000003955	RANBP17	85	87.984	Ailuropoda_melanoleuca
ENSSHAG00000000333	-	100	87.169	ENSCJAG00000019368	RANBP17	86	87.169	Callithrix_jacchus
ENSSHAG00000000333	-	99	68.648	ENSCAFG00000009928	XPO7	50	67.339	Canis_familiaris
ENSSHAG00000000333	-	100	88.595	ENSCAFG00000016935	RANBP17	85	88.595	Canis_familiaris
ENSSHAG00000000333	-	99	87.730	ENSCHIG00000007336	-	85	87.730	Capra_hircus
ENSSHAG00000000333	-	99	87.680	ENSTSYG00000029782	RANBP17	84	87.680	Carlito_syrichta
ENSSHAG00000000333	-	99	88.320	ENSCPOG00000005628	RANBP17	99	87.560	Cavia_porcellus
ENSSHAG00000000333	-	100	88.595	ENSCATG00000011884	RANBP17	85	88.344	Cercocebus_atys
ENSSHAG00000000333	-	99	88.730	ENSCLAG00000013185	RANBP17	99	87.560	Chinchilla_lanigera
ENSSHAG00000000333	-	99	88.660	ENSCANG00000039832	RANBP17	85	87.935	Colobus_angolensis_palliatus
ENSSHAG00000000333	-	100	86.354	ENSCGRG00001015450	Ranbp17	95	87.010	Cricetulus_griseus_chok1gshd
ENSSHAG00000000333	-	99	80.258	ENSCGRG00000005277	-	94	80.258	Cricetulus_griseus_crigri
ENSSHAG00000000333	-	99	87.500	ENSDORG00000001411	Ranbp17	100	87.081	Dipodomys_ordii
ENSSHAG00000000333	-	99	88.753	ENSGGOG00000010374	RANBP17	85	88.139	Gorilla_gorilla
ENSSHAG00000000333	-	99	88.115	ENSHGLG00000014605	RANBP17	99	87.560	Heterocephalus_glaber_female
ENSSHAG00000000333	-	99	88.115	ENSHGLG00100011629	RANBP17	99	87.560	Heterocephalus_glaber_male
ENSSHAG00000000333	-	99	89.072	ENSSTOG00000014700	RANBP17	99	88.995	Ictidomys_tridecemlineatus
ENSSHAG00000000333	-	99	88.344	ENSMFAG00000034347	RANBP17	85	87.730	Macaca_fascicularis
ENSSHAG00000000333	-	100	87.984	ENSMMUG00000015840	RANBP17	85	87.984	Macaca_mulatta
ENSSHAG00000000333	-	99	88.344	ENSMNEG00000045556	RANBP17	85	87.730	Macaca_nemestrina
ENSSHAG00000000333	-	99	86.503	ENSMAUG00000017990	Ranbp17	99	86.124	Mesocricetus_auratus
ENSSHAG00000000333	-	99	89.256	ENSMICG00000027710	RANBP17	85	89.256	Microcebus_murinus
ENSSHAG00000000333	-	100	77.800	ENSMOCG00000007105	Ranbp17	99	86.603	Microtus_ochrogaster
ENSSHAG00000000333	-	100	86.762	MGP_CAROLIEiJ_G0016194	Ranbp17	99	86.603	Mus_caroli
ENSSHAG00000000333	-	100	87.169	ENSMUSG00000040594	Ranbp17	99	87.081	Mus_musculus
ENSSHAG00000000333	-	100	85.743	MGP_PahariEiJ_G0017330	Ranbp17	99	85.646	Mus_pahari
ENSSHAG00000000333	-	100	86.558	MGP_SPRETEiJ_G0017035	-	99	86.124	Mus_spretus
ENSSHAG00000000333	-	99	67.828	ENSMPUG00000019195	-	91	67.828	Mustela_putorius_furo
ENSSHAG00000000333	-	99	87.269	ENSNGAG00000014221	Ranbp17	99	87.269	Nannospalax_galili
ENSSHAG00000000333	-	99	88.934	ENSNLEG00000000281	RANBP17	85	88.320	Nomascus_leucogenys
ENSSHAG00000000333	-	57	64.184	ENSOANG00000013187	-	88	64.184	Ornithorhynchus_anatinus
ENSSHAG00000000333	-	100	88.391	ENSPPAG00000041600	RANBP17	85	88.139	Pan_paniscus
ENSSHAG00000000333	-	100	88.595	ENSPTRG00000028506	RANBP17	85	88.344	Pan_troglodytes
ENSSHAG00000000333	-	100	88.595	ENSPANG00000002592	RANBP17	85	88.595	Papio_anubis
ENSSHAG00000000333	-	99	86.708	ENSPEMG00000013086	Ranbp17	99	86.603	Peromyscus_maniculatus_bairdii
ENSSHAG00000000333	-	100	83.707	ENSPCOG00000007993	-	97	83.673	Propithecus_coquereli
ENSSHAG00000000333	-	100	88.391	ENSRBIG00000040500	RANBP17	85	88.139	Rhinopithecus_bieti
ENSSHAG00000000333	-	100	88.391	ENSRROG00000045173	RANBP17	85	88.139	Rhinopithecus_roxellana
ENSSHAG00000000333	-	99	88.247	ENSSPUG00000017286	RANBP17	82	88.247	Sphenodon_punctatus
ENSSHAG00000000333	-	75	67.030	ENSTRUG00000017316	-	84	67.030	Takifugu_rubripes
ENSSHAG00000000333	-	99	69.610	ENSTNIG00000004671	xpo7	52	69.610	Tetraodon_nigroviridis
ENSSHAG00000000333	-	99	68.648	ENSUAMG00000003008	XPO7	85	69.002	Ursus_americanus