EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000000372 (Gene tree)
Gene ID: 100935015
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 29996 bases
Position: chrGL834777.1:680-30675
Accession: 100935015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000421	CPSF_A	PF03178.15	4.9e-102	1	1
ENSSHAP00000000422	CPSF_A	PF03178.15	6.2e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000426	SF3B3-201	3809	-	ENSSHAP00000000421	1217 (aa)	XP_003758628	G3VB67
ENSSHAT00000000427	SF3B3-202	3711	-	ENSSHAP00000000422	1166 (aa)	-	G3VB68

Gene Model

Click here to download ENSSHAG00000000372's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000372	SF3B3	100	99.671	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSSHAG00000000372	SF3B3	96	93.681	ENSAPOG00000006172	sf3b3	98	93.681	Acanthochromis_polyacanthus
ENSSHAG00000000372	SF3B3	100	99.508	ENSAMEG00000002187	SF3B3	100	99.508	Ailuropoda_melanoleuca
ENSSHAG00000000372	SF3B3	96	90.804	ENSACIG00000016487	sf3b3	100	90.804	Amphilophus_citrinellus
ENSSHAG00000000372	SF3B3	100	93.591	ENSAOCG00000007158	sf3b3	100	93.591	Amphiprion_ocellaris
ENSSHAG00000000372	SF3B3	100	93.591	ENSAPEG00000022786	sf3b3	100	93.591	Amphiprion_percula
ENSSHAG00000000372	SF3B3	100	93.673	ENSATEG00000013708	sf3b3	100	93.673	Anabas_testudineus
ENSSHAG00000000372	SF3B3	81	97.872	ENSAPLG00000004996	SF3B3	100	97.872	Anas_platyrhynchos
ENSSHAG00000000372	SF3B3	100	98.767	ENSACAG00000001817	SF3B3	100	98.767	Anolis_carolinensis
ENSSHAG00000000372	SF3B3	100	99.671	ENSANAG00000028001	SF3B3	100	99.671	Aotus_nancymaae
ENSSHAG00000000372	SF3B3	96	93.339	ENSACLG00000022555	sf3b3	98	93.339	Astatotilapia_calliptera
ENSSHAG00000000372	SF3B3	100	93.344	ENSAMXG00000003410	sf3b3	100	93.344	Astyanax_mexicanus
ENSSHAG00000000372	SF3B3	100	99.671	ENSBTAG00000010627	SF3B3	100	99.671	Bos_taurus
ENSSHAG00000000372	SF3B3	100	60.212	WBGene00019323	teg-4	100	60.212	Caenorhabditis_elegans
ENSSHAG00000000372	SF3B3	100	99.671	ENSCJAG00000014773	SF3B3	99	99.671	Callithrix_jacchus
ENSSHAG00000000372	SF3B3	100	99.753	ENSCAFG00000020151	SF3B3	100	99.753	Canis_familiaris
ENSSHAG00000000372	SF3B3	100	99.753	ENSCAFG00020020912	SF3B3	100	99.753	Canis_lupus_dingo
ENSSHAG00000000372	SF3B3	100	99.753	ENSCHIG00000019822	SF3B3	100	99.753	Capra_hircus
ENSSHAG00000000372	SF3B3	100	99.671	ENSTSYG00000007910	SF3B3	100	99.671	Carlito_syrichta
ENSSHAG00000000372	SF3B3	84	88.787	ENSCAPG00000001484	SF3B3	92	88.787	Cavia_aperea
ENSSHAG00000000372	SF3B3	100	98.357	ENSCPOG00000000586	SF3B3	100	98.357	Cavia_porcellus
ENSSHAG00000000372	SF3B3	100	99.671	ENSCCAG00000017736	SF3B3	100	99.671	Cebus_capucinus
ENSSHAG00000000372	SF3B3	100	99.671	ENSCATG00000036562	SF3B3	100	99.671	Cercocebus_atys
ENSSHAG00000000372	SF3B3	100	99.671	ENSCLAG00000003921	SF3B3	100	99.671	Chinchilla_lanigera
ENSSHAG00000000372	SF3B3	100	99.753	ENSCSAG00000004371	SF3B3	100	99.753	Chlorocebus_sabaeus
ENSSHAG00000000372	SF3B3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSSHAG00000000372	SF3B3	100	99.014	ENSCPBG00000015853	SF3B3	100	99.014	Chrysemys_picta_bellii
ENSSHAG00000000372	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSSHAG00000000372	SF3B3	99	79.310	ENSCSAVG00000011454	-	100	79.310	Ciona_savignyi
ENSSHAG00000000372	SF3B3	100	96.549	ENSCANG00000042920	SF3B3	100	96.549	Colobus_angolensis_palliatus
ENSSHAG00000000372	SF3B3	100	99.589	ENSCGRG00001015908	Sf3b3	100	99.589	Cricetulus_griseus_chok1gshd
ENSSHAG00000000372	SF3B3	100	99.589	ENSCGRG00000010180	Sf3b3	100	99.589	Cricetulus_griseus_crigri
ENSSHAG00000000372	SF3B3	82	92.715	ENSCSEG00000014192	sf3b3	99	92.715	Cynoglossus_semilaevis
ENSSHAG00000000372	SF3B3	100	92.769	ENSCVAG00000010459	sf3b3	100	92.769	Cyprinodon_variegatus
ENSSHAG00000000372	SF3B3	100	93.591	ENSDARG00000103553	sf3b3	100	93.591	Danio_rerio
ENSSHAG00000000372	SF3B3	89	99.614	ENSDNOG00000043626	SF3B3	100	99.614	Dasypus_novemcinctus
ENSSHAG00000000372	SF3B3	100	99.671	ENSDORG00000014176	Sf3b3	100	99.671	Dipodomys_ordii
ENSSHAG00000000372	SF3B3	100	75.061	FBgn0035162	Sf3b3	100	75.061	Drosophila_melanogaster
ENSSHAG00000000372	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSSHAG00000000372	SF3B3	100	87.921	ENSEBUG00000006117	sf3b3	100	87.921	Eptatretus_burgeri
ENSSHAG00000000372	SF3B3	100	99.753	ENSEASG00005013376	SF3B3	100	99.753	Equus_asinus_asinus
ENSSHAG00000000372	SF3B3	100	99.753	ENSECAG00000014053	SF3B3	100	99.753	Equus_caballus
ENSSHAG00000000372	SF3B3	93	99.821	ENSEEUG00000015611	SF3B3	93	99.821	Erinaceus_europaeus
ENSSHAG00000000372	SF3B3	100	91.557	ENSELUG00000015417	sf3b3	100	91.557	Esox_lucius
ENSSHAG00000000372	SF3B3	100	99.753	ENSFCAG00000009487	SF3B3	100	99.753	Felis_catus
ENSSHAG00000000372	SF3B3	100	98.932	ENSFALG00000007372	SF3B3	100	98.932	Ficedula_albicollis
ENSSHAG00000000372	SF3B3	100	99.753	ENSFDAG00000002608	SF3B3	100	99.753	Fukomys_damarensis
ENSSHAG00000000372	SF3B3	100	93.180	ENSFHEG00000017824	sf3b3	100	93.180	Fundulus_heteroclitus
ENSSHAG00000000372	SF3B3	100	89.573	ENSGMOG00000008139	sf3b3	100	89.573	Gadus_morhua
ENSSHAG00000000372	SF3B3	100	98.932	ENSGALG00000002531	SF3B3	100	98.932	Gallus_gallus
ENSSHAG00000000372	SF3B3	100	92.769	ENSGAFG00000015206	sf3b3	100	92.769	Gambusia_affinis
ENSSHAG00000000372	SF3B3	100	93.186	ENSGACG00000002646	sf3b3	100	93.186	Gasterosteus_aculeatus
ENSSHAG00000000372	SF3B3	96	99.061	ENSGAGG00000006746	SF3B3	97	99.061	Gopherus_agassizii
ENSSHAG00000000372	SF3B3	100	99.671	ENSGGOG00000003246	SF3B3	100	99.671	Gorilla_gorilla
ENSSHAG00000000372	SF3B3	96	85.893	ENSHBUG00000005960	sf3b3	100	87.054	Haplochromis_burtoni
ENSSHAG00000000372	SF3B3	100	99.671	ENSHGLG00000010135	SF3B3	100	99.671	Heterocephalus_glaber_female
ENSSHAG00000000372	SF3B3	100	97.486	ENSHGLG00100011148	SF3B3	100	97.486	Heterocephalus_glaber_male
ENSSHAG00000000372	SF3B3	100	92.851	ENSHCOG00000011981	sf3b3	100	92.851	Hippocampus_comes
ENSSHAG00000000372	SF3B3	100	93.262	ENSIPUG00000020435	sf3b3	100	93.262	Ictalurus_punctatus
ENSSHAG00000000372	SF3B3	100	99.671	ENSSTOG00000007065	SF3B3	100	99.671	Ictidomys_tridecemlineatus
ENSSHAG00000000372	SF3B3	100	99.671	ENSJJAG00000003948	Sf3b3	100	99.671	Jaculus_jaculus
ENSSHAG00000000372	SF3B3	100	90.961	ENSKMAG00000004066	sf3b3	99	93.168	Kryptolebias_marmoratus
ENSSHAG00000000372	SF3B3	100	93.098	ENSLBEG00000018302	sf3b3	100	93.098	Labrus_bergylta
ENSSHAG00000000372	SF3B3	98	92.276	ENSLACG00000012501	SF3B3	99	92.276	Latimeria_chalumnae
ENSSHAG00000000372	SF3B3	100	94.253	ENSLOCG00000007566	sf3b3	100	94.253	Lepisosteus_oculatus
ENSSHAG00000000372	SF3B3	100	99.753	ENSLAFG00000012219	SF3B3	100	99.753	Loxodonta_africana
ENSSHAG00000000372	SF3B3	100	99.671	ENSMFAG00000045487	SF3B3	100	99.671	Macaca_fascicularis
ENSSHAG00000000372	SF3B3	100	99.671	ENSMMUG00000017812	SF3B3	100	99.671	Macaca_mulatta
ENSSHAG00000000372	SF3B3	100	99.671	ENSMNEG00000033385	SF3B3	100	99.671	Macaca_nemestrina
ENSSHAG00000000372	SF3B3	100	96.138	ENSMLEG00000043891	SF3B3	100	96.138	Mandrillus_leucophaeus
ENSSHAG00000000372	SF3B3	100	93.673	ENSMAMG00000016837	sf3b3	100	93.673	Mastacembelus_armatus
ENSSHAG00000000372	SF3B3	100	93.262	ENSMZEG00005010836	sf3b3	100	93.262	Maylandia_zebra
ENSSHAG00000000372	SF3B3	93	90.379	ENSMZEG00005026015	sf3b3	99	90.379	Maylandia_zebra
ENSSHAG00000000372	SF3B3	100	98.932	ENSMGAG00000001597	SF3B3	100	98.932	Meleagris_gallopavo
ENSSHAG00000000372	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSSHAG00000000372	SF3B3	100	98.523	ENSMICG00000001363	SF3B3	100	98.523	Microcebus_murinus
ENSSHAG00000000372	SF3B3	100	99.589	ENSMOCG00000006108	Sf3b3	100	99.589	Microtus_ochrogaster
ENSSHAG00000000372	SF3B3	93	90.749	ENSMMOG00000002598	sf3b3	97	90.749	Mola_mola
ENSSHAG00000000372	SF3B3	100	95.649	ENSMODG00000014363	SF3B3	100	95.649	Monodelphis_domestica
ENSSHAG00000000372	SF3B3	100	93.344	ENSMALG00000008014	sf3b3	100	93.344	Monopterus_albus
ENSSHAG00000000372	SF3B3	100	99.507	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.507	Mus_caroli
ENSSHAG00000000372	SF3B3	100	99.589	ENSMUSG00000033732	Sf3b3	100	99.589	Mus_musculus
ENSSHAG00000000372	SF3B3	100	99.507	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.507	Mus_spretus
ENSSHAG00000000372	SF3B3	100	99.753	ENSMPUG00000010277	SF3B3	100	99.753	Mustela_putorius_furo
ENSSHAG00000000372	SF3B3	100	99.507	ENSMLUG00000014607	SF3B3	100	99.507	Myotis_lucifugus
ENSSHAG00000000372	SF3B3	100	99.671	ENSNGAG00000021903	Sf3b3	100	99.671	Nannospalax_galili
ENSSHAG00000000372	SF3B3	87	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSSHAG00000000372	SF3B3	100	98.194	ENSNLEG00000016127	SF3B3	100	98.194	Nomascus_leucogenys
ENSSHAG00000000372	SF3B3	92	99.736	ENSMEUG00000004479	SF3B3	94	99.736	Notamacropus_eugenii
ENSSHAG00000000372	SF3B3	98	96.396	ENSOPRG00000009847	SF3B3	100	96.396	Ochotona_princeps
ENSSHAG00000000372	SF3B3	100	99.753	ENSODEG00000014154	SF3B3	100	99.753	Octodon_degus
ENSSHAG00000000372	SF3B3	100	93.509	ENSONIG00000011198	sf3b3	100	93.509	Oreochromis_niloticus
ENSSHAG00000000372	SF3B3	100	100.000	ENSOANG00000001161	-	100	100.000	Ornithorhynchus_anatinus
ENSSHAG00000000372	SF3B3	100	97.288	ENSOCUG00000004139	SF3B3	100	97.288	Oryctolagus_cuniculus
ENSSHAG00000000372	SF3B3	100	93.344	ENSORLG00000013472	sf3b3	100	93.344	Oryzias_latipes
ENSSHAG00000000372	SF3B3	100	93.344	ENSORLG00020017473	sf3b3	100	93.344	Oryzias_latipes_hni
ENSSHAG00000000372	SF3B3	100	93.344	ENSORLG00015007710	sf3b3	100	93.344	Oryzias_latipes_hsok
ENSSHAG00000000372	SF3B3	100	93.016	ENSOMEG00000014483	sf3b3	100	93.016	Oryzias_melastigma
ENSSHAG00000000372	SF3B3	100	99.262	ENSOGAG00000016051	SF3B3	100	99.262	Otolemur_garnettii
ENSSHAG00000000372	SF3B3	100	99.508	ENSOARG00000004816	SF3B3	100	99.508	Ovis_aries
ENSSHAG00000000372	SF3B3	100	99.671	ENSPPAG00000026807	SF3B3	100	99.671	Pan_paniscus
ENSSHAG00000000372	SF3B3	100	99.753	ENSPPRG00000001686	SF3B3	100	99.753	Panthera_pardus
ENSSHAG00000000372	SF3B3	93	96.688	ENSPTIG00000020382	SF3B3	100	96.688	Panthera_tigris_altaica
ENSSHAG00000000372	SF3B3	100	99.671	ENSPTRG00000008308	SF3B3	100	99.671	Pan_troglodytes
ENSSHAG00000000372	SF3B3	100	99.671	ENSPANG00000024075	SF3B3	100	99.671	Papio_anubis
ENSSHAG00000000372	SF3B3	100	92.769	ENSPKIG00000002712	sf3b3	100	92.769	Paramormyrops_kingsleyae
ENSSHAG00000000372	SF3B3	93	99.356	ENSPSIG00000002232	SF3B3	100	99.356	Pelodiscus_sinensis
ENSSHAG00000000372	SF3B3	100	99.589	ENSPEMG00000008603	Sf3b3	100	99.589	Peromyscus_maniculatus_bairdii
ENSSHAG00000000372	SF3B3	100	92.112	ENSPMAG00000001793	sf3b3	100	92.112	Petromyzon_marinus
ENSSHAG00000000372	SF3B3	100	100.000	ENSPCIG00000014927	SF3B3	100	100.000	Phascolarctos_cinereus
ENSSHAG00000000372	SF3B3	100	92.851	ENSPFOG00000015516	sf3b3	100	92.851	Poecilia_formosa
ENSSHAG00000000372	SF3B3	100	92.851	ENSPLAG00000014330	sf3b3	100	92.851	Poecilia_latipinna
ENSSHAG00000000372	SF3B3	100	92.933	ENSPMEG00000019856	sf3b3	100	92.933	Poecilia_mexicana
ENSSHAG00000000372	SF3B3	81	93.801	ENSPREG00000019669	sf3b3	97	93.801	Poecilia_reticulata
ENSSHAG00000000372	SF3B3	95	99.513	ENSPPYG00000007539	SF3B3	100	99.513	Pongo_abelii
ENSSHAG00000000372	SF3B3	100	78.061	ENSPCAG00000002623	SF3B3	100	78.061	Procavia_capensis
ENSSHAG00000000372	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSSHAG00000000372	SF3B3	100	99.671	ENSPVAG00000000684	SF3B3	100	99.671	Pteropus_vampyrus
ENSSHAG00000000372	SF3B3	100	93.344	ENSPNYG00000003528	sf3b3	100	93.344	Pundamilia_nyererei
ENSSHAG00000000372	SF3B3	100	93.509	ENSPNAG00000015419	sf3b3	100	93.509	Pygocentrus_nattereri
ENSSHAG00000000372	SF3B3	100	99.589	ENSRNOG00000017724	Sf3b3	100	99.589	Rattus_norvegicus
ENSSHAG00000000372	SF3B3	100	99.671	ENSRBIG00000021904	SF3B3	100	99.671	Rhinopithecus_bieti
ENSSHAG00000000372	SF3B3	100	99.671	ENSRROG00000045703	SF3B3	100	99.671	Rhinopithecus_roxellana
ENSSHAG00000000372	SF3B3	100	99.671	ENSSBOG00000029156	SF3B3	100	99.671	Saimiri_boliviensis_boliviensis
ENSSHAG00000000372	SF3B3	100	93.919	ENSSFOG00015012877	sf3b3	100	93.919	Scleropages_formosus
ENSSHAG00000000372	SF3B3	100	93.016	ENSSMAG00000014386	sf3b3	100	93.016	Scophthalmus_maximus
ENSSHAG00000000372	SF3B3	100	93.755	ENSSDUG00000021201	sf3b3	100	93.755	Seriola_dumerili
ENSSHAG00000000372	SF3B3	100	93.673	ENSSLDG00000017532	sf3b3	100	93.673	Seriola_lalandi_dorsalis
ENSSHAG00000000372	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSSHAG00000000372	SF3B3	100	98.932	ENSSPUG00000006253	SF3B3	100	98.932	Sphenodon_punctatus
ENSSHAG00000000372	SF3B3	100	85.867	ENSSPAG00000003125	sf3b3	100	85.867	Stegastes_partitus
ENSSHAG00000000372	SF3B3	100	99.753	ENSSSCG00000025323	SF3B3	100	99.753	Sus_scrofa
ENSSHAG00000000372	SF3B3	100	99.097	ENSTGUG00000006082	SF3B3	100	99.097	Taeniopygia_guttata
ENSSHAG00000000372	SF3B3	50	84.148	ENSTRUG00000015623	sf3b3	88	84.148	Takifugu_rubripes
ENSSHAG00000000372	SF3B3	89	93.290	ENSTNIG00000004857	sf3b3	100	93.290	Tetraodon_nigroviridis
ENSSHAG00000000372	SF3B3	93	84.507	ENSTBEG00000002946	SF3B3	100	84.507	Tupaia_belangeri
ENSSHAG00000000372	SF3B3	100	98.932	ENSTTRG00000005855	SF3B3	100	98.932	Tursiops_truncatus
ENSSHAG00000000372	SF3B3	100	99.753	ENSUAMG00000006780	SF3B3	100	99.753	Ursus_americanus
ENSSHAG00000000372	SF3B3	100	99.753	ENSUMAG00000017757	SF3B3	100	99.753	Ursus_maritimus
ENSSHAG00000000372	SF3B3	100	83.566	ENSVPAG00000003202	SF3B3	100	83.566	Vicugna_pacos
ENSSHAG00000000372	SF3B3	100	99.671	ENSVVUG00000017922	SF3B3	100	99.671	Vulpes_vulpes
ENSSHAG00000000372	SF3B3	100	96.713	ENSXETG00000032869	SF3B3	100	96.713	Xenopus_tropicalis
ENSSHAG00000000372	SF3B3	77	94.374	ENSXCOG00000013628	sf3b3	97	94.374	Xiphophorus_couchianus
ENSSHAG00000000372	SF3B3	100	92.851	ENSXMAG00000006334	sf3b3	99	94.004	Xiphophorus_maculatus