EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000000380 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 1497 bases
Position: chrGL861467.1:721-2217
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000430	EST1_DNA_bind	PF10373.9	1.3e-11	1	1
ENSSHAP00000000430	PIN_4	PF13638.6	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000435	-	1497	-	ENSSHAP00000000430	499 (aa)	-	G3VB76

Gene Model

Click here to download ENSSHAG00000000380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000380	-	99	39.802	ENSG00000070366	SMG6	92	46.457	Homo_sapiens
ENSSHAG00000000380	-	99	40.000	ENSTSYG00000003406	SMG6	97	40.000	Carlito_syrichta
ENSSHAG00000000380	-	99	39.328	ENSCPOG00000014878	SMG6	96	39.827	Cavia_porcellus
ENSSHAG00000000380	-	99	39.130	ENSCLAG00000006748	SMG6	87	41.784	Chinchilla_lanigera
ENSSHAG00000000380	-	99	39.802	ENSCANG00000031764	SMG6	97	40.637	Colobus_angolensis_palliatus
ENSSHAG00000000380	-	99	39.526	ENSDORG00000016614	Smg6	88	42.723	Dipodomys_ordii
ENSSHAG00000000380	-	99	38.933	ENSFDAG00000015106	SMG6	79	40.933	Fukomys_damarensis
ENSSHAG00000000380	-	99	39.130	ENSHGLG00000012882	SMG6	87	42.254	Heterocephalus_glaber_female
ENSSHAG00000000380	-	99	39.130	ENSHGLG00100017815	SMG6	87	42.254	Heterocephalus_glaber_male
ENSSHAG00000000380	-	99	39.328	ENSSTOG00000028127	SMG6	88	42.254	Ictidomys_tridecemlineatus
ENSSHAG00000000380	-	90	39.738	ENSLACG00000003276	SMG6	97	39.738	Latimeria_chalumnae
ENSSHAG00000000380	-	72	40.054	ENSMGAG00000017200	-	99	40.054	Meleagris_gallopavo
ENSSHAG00000000380	-	100	41.833	ENSMODG00000024460	-	98	41.833	Monodelphis_domestica
ENSSHAG00000000380	-	100	41.235	ENSMODG00000024463	-	98	41.434	Monodelphis_domestica
ENSSHAG00000000380	-	100	42.430	ENSMODG00000024395	-	98	42.032	Monodelphis_domestica
ENSSHAG00000000380	-	100	41.633	ENSMODG00000024410	-	98	41.633	Monodelphis_domestica
ENSSHAG00000000380	-	99	39.130	MGP_CAROLIEiJ_G0016729	Smg6	79	40.933	Mus_caroli
ENSSHAG00000000380	-	99	39.130	ENSMUSG00000038290	Smg6	87	41.784	Mus_musculus
ENSSHAG00000000380	-	99	40.120	MGP_PahariEiJ_G0017866	Smg6	87	41.784	Mus_pahari
ENSSHAG00000000380	-	99	39.130	MGP_SPRETEiJ_G0017572	Smg6	87	41.784	Mus_spretus
ENSSHAG00000000380	-	99	39.130	ENSNGAG00000007287	Smg6	95	39.149	Nannospalax_galili
ENSSHAG00000000380	-	99	39.802	ENSNLEG00000017171	SMG6	97	40.637	Nomascus_leucogenys
ENSSHAG00000000380	-	99	39.448	ENSODEG00000008038	SMG6	61	46.721	Octodon_degus
ENSSHAG00000000380	-	51	33.840	ENSOANG00000030166	-	79	33.712	Ornithorhynchus_anatinus
ENSSHAG00000000380	-	99	40.519	ENSPTIG00000008925	SMG6	97	40.519	Panthera_tigris_altaica
ENSSHAG00000000380	-	99	39.802	ENSPTRG00000008544	SMG6	97	40.637	Pan_troglodytes
ENSSHAG00000000380	-	99	39.328	ENSPEMG00000020707	Smg6	89	42.254	Peromyscus_maniculatus_bairdii
ENSSHAG00000000380	-	99	39.802	ENSRROG00000030423	SMG6	97	40.438	Rhinopithecus_roxellana