EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000000449 (Gene tree)
Gene ID: 100928676
Gene Symbol: ESF1
Alias: C20orf6|bA526K24.1
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 79724 bases
Position: chrGL834723.1:1055-80778
Accession: 100928676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000502	NUC153	PF08159.12	4.5e-11	1	1
ENSSHAP00000000501	NUC153	PF08159.12	4.6e-11	1	1
ENSSHAP00000000500	NUC153	PF08159.12	4.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000509	ESF1-202	2567	-	ENSSHAP00000000501	821 (aa)	XP_003758227	G3VBE7
ENSSHAT00000000508	ESF1-201	2645	-	ENSSHAP00000000500	847 (aa)	-	G3VBE6
ENSSHAT00000000510	ESF1-203	2424	-	ENSSHAP00000000502	807 (aa)	-	G3VBE8

Gene Model

Click here to download ENSSHAG00000000449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000449	ESF1	100	68.445	ENSG00000089048	ESF1	100	68.409	Homo_sapiens
ENSSHAG00000000449	ESF1	63	53.745	ENSAPOG00000003004	esf1	99	54.563	Acanthochromis_polyacanthus
ENSSHAG00000000449	ESF1	100	68.415	ENSAMEG00000008830	ESF1	100	67.940	Ailuropoda_melanoleuca
ENSSHAG00000000449	ESF1	81	73.333	ENSACIG00000018305	esf1	90	73.611	Amphilophus_citrinellus
ENSSHAG00000000449	ESF1	80	72.727	ENSAOCG00000006033	esf1	88	72.222	Amphiprion_ocellaris
ENSSHAG00000000449	ESF1	80	72.727	ENSAPEG00000022385	esf1	92	72.222	Amphiprion_percula
ENSSHAG00000000449	ESF1	76	74.324	ENSATEG00000016321	esf1	85	75.000	Anabas_testudineus
ENSSHAG00000000449	ESF1	100	60.824	ENSAPLG00000012113	ESF1	100	61.922	Anas_platyrhynchos
ENSSHAG00000000449	ESF1	100	61.484	ENSACAG00000000963	ESF1	100	63.133	Anolis_carolinensis
ENSSHAG00000000449	ESF1	100	69.814	ENSANAG00000036778	ESF1	100	70.492	Aotus_nancymaae
ENSSHAG00000000449	ESF1	84	72.727	ENSACLG00000002972	esf1	95	72.222	Astatotilapia_calliptera
ENSSHAG00000000449	ESF1	77	65.385	ENSAMXG00000001172	esf1	92	66.667	Astyanax_mexicanus
ENSSHAG00000000449	ESF1	100	69.061	ENSBTAG00000007130	ESF1	100	68.634	Bos_taurus
ENSSHAG00000000449	ESF1	100	68.824	ENSCJAG00000004640	ESF1	100	70.118	Callithrix_jacchus
ENSSHAG00000000449	ESF1	100	70.292	ENSCAFG00000005587	ESF1	100	69.293	Canis_familiaris
ENSSHAG00000000449	ESF1	100	70.292	ENSCAFG00020027530	ESF1	100	69.293	Canis_lupus_dingo
ENSSHAG00000000449	ESF1	100	71.343	ENSCHIG00000021188	ESF1	100	71.377	Capra_hircus
ENSSHAG00000000449	ESF1	100	70.375	ENSTSYG00000009956	ESF1	100	70.375	Carlito_syrichta
ENSSHAG00000000449	ESF1	90	82.993	ENSCAPG00000010466	-	95	82.432	Cavia_aperea
ENSSHAG00000000449	ESF1	79	83.333	ENSCAPG00000010333	-	98	74.775	Cavia_aperea
ENSSHAG00000000449	ESF1	100	70.987	ENSCPOG00000014027	-	100	70.987	Cavia_porcellus
ENSSHAG00000000449	ESF1	100	69.014	ENSCCAG00000024521	ESF1	100	69.718	Cebus_capucinus
ENSSHAG00000000449	ESF1	68	82.914	ENSCATG00000042792	ESF1	100	70.492	Cercocebus_atys
ENSSHAG00000000449	ESF1	100	70.848	ENSCLAG00000013266	-	100	70.251	Chinchilla_lanigera
ENSSHAG00000000449	ESF1	100	68.525	ENSCSAG00000011777	ESF1	100	70.775	Chlorocebus_sabaeus
ENSSHAG00000000449	ESF1	74	51.515	ENSCING00000020446	-	97	50.794	Ciona_intestinalis
ENSSHAG00000000449	ESF1	75	50.000	ENSCSAVG00000009015	-	92	49.206	Ciona_savignyi
ENSSHAG00000000449	ESF1	100	69.849	ENSCANG00000030674	ESF1	100	70.561	Colobus_angolensis_palliatus
ENSSHAG00000000449	ESF1	100	68.310	ENSCGRG00001018257	Esf1	100	68.966	Cricetulus_griseus_chok1gshd
ENSSHAG00000000449	ESF1	78	72.308	ENSCSEG00000001159	esf1	85	73.016	Cynoglossus_semilaevis
ENSSHAG00000000449	ESF1	78	70.769	ENSCVAG00000007894	esf1	98	63.889	Cyprinodon_variegatus
ENSSHAG00000000449	ESF1	79	70.270	ENSDARG00000008740	esf1	91	70.833	Danio_rerio
ENSSHAG00000000449	ESF1	100	69.159	ENSDNOG00000019409	ESF1	100	70.200	Dasypus_novemcinctus
ENSSHAG00000000449	ESF1	100	69.249	ENSDORG00000016313	Esf1	100	70.213	Dipodomys_ordii
ENSSHAG00000000449	ESF1	78	50.000	FBgn0024364	CG11417	85	56.061	Drosophila_melanogaster
ENSSHAG00000000449	ESF1	82	74.153	ENSETEG00000004471	ESF1	79	71.967	Echinops_telfairi
ENSSHAG00000000449	ESF1	70	50.505	ENSEBUG00000015161	esf1	99	44.728	Eptatretus_burgeri
ENSSHAG00000000449	ESF1	100	70.609	ENSEASG00005001777	ESF1	100	70.141	Equus_asinus_asinus
ENSSHAG00000000449	ESF1	100	70.726	ENSECAG00000019188	ESF1	100	70.258	Equus_caballus
ENSSHAG00000000449	ESF1	63	63.158	ENSEEUG00000015837	-	76	78.261	Erinaceus_europaeus
ENSSHAG00000000449	ESF1	74	70.513	ENSELUG00000000408	esf1	86	70.833	Esox_lucius
ENSSHAG00000000449	ESF1	100	70.220	ENSFCAG00000000919	ESF1	100	69.606	Felis_catus
ENSSHAG00000000449	ESF1	70	72.695	ENSFALG00000010914	ESF1	99	61.098	Ficedula_albicollis
ENSSHAG00000000449	ESF1	100	70.828	ENSFDAG00000014777	ESF1	100	70.828	Fukomys_damarensis
ENSSHAG00000000449	ESF1	63	57.977	ENSFHEG00000014984	esf1	99	59.802	Fundulus_heteroclitus
ENSSHAG00000000449	ESF1	100	61.754	ENSGALG00000034768	ESF1	100	61.916	Gallus_gallus
ENSSHAG00000000449	ESF1	80	63.514	ENSGAFG00000000540	esf1	90	63.889	Gambusia_affinis
ENSSHAG00000000449	ESF1	100	68.561	ENSGGOG00000006692	ESF1	100	68.525	Gorilla_gorilla
ENSSHAG00000000449	ESF1	85	74.026	ENSHBUG00000001890	esf1	97	66.667	Haplochromis_burtoni
ENSSHAG00000000449	ESF1	100	70.228	ENSHGLG00000011505	ESF1	100	70.560	Heterocephalus_glaber_female
ENSSHAG00000000449	ESF1	100	70.228	ENSHGLG00100015045	ESF1	100	70.560	Heterocephalus_glaber_male
ENSSHAG00000000449	ESF1	75	69.231	ENSIPUG00000006507	esf1	100	51.948	Ictalurus_punctatus
ENSSHAG00000000449	ESF1	100	69.834	ENSSTOG00000009846	ESF1	100	70.309	Ictidomys_tridecemlineatus
ENSSHAG00000000449	ESF1	100	67.727	ENSJJAG00000012570	Esf1	100	68.123	Jaculus_jaculus
ENSSHAG00000000449	ESF1	68	68.662	ENSLACG00000016439	ESF1	85	82.857	Latimeria_chalumnae
ENSSHAG00000000449	ESF1	75	74.359	ENSLOCG00000015979	esf1	100	56.619	Lepisosteus_oculatus
ENSSHAG00000000449	ESF1	100	70.441	ENSLAFG00000005479	ESF1	100	70.853	Loxodonta_africana
ENSSHAG00000000449	ESF1	68	82.734	ENSMFAG00000036841	ESF1	100	70.258	Macaca_fascicularis
ENSSHAG00000000449	ESF1	68	82.734	ENSMNEG00000044042	ESF1	100	70.375	Macaca_nemestrina
ENSSHAG00000000449	ESF1	68	82.734	ENSMLEG00000037121	ESF1	100	70.023	Mandrillus_leucophaeus
ENSSHAG00000000449	ESF1	80	75.676	ENSMAMG00000018648	esf1	88	76.389	Mastacembelus_armatus
ENSSHAG00000000449	ESF1	63	59.259	ENSMZEG00005013912	esf1	99	59.369	Maylandia_zebra
ENSSHAG00000000449	ESF1	100	61.414	ENSMGAG00000004291	ESF1	100	59.147	Meleagris_gallopavo
ENSSHAG00000000449	ESF1	100	68.075	ENSMAUG00000015975	Esf1	100	68.876	Mesocricetus_auratus
ENSSHAG00000000449	ESF1	100	69.321	ENSMICG00000010711	ESF1	100	70.409	Microcebus_murinus
ENSSHAG00000000449	ESF1	100	66.627	ENSMOCG00000005902	Esf1	100	66.982	Microtus_ochrogaster
ENSSHAG00000000449	ESF1	63	58.955	ENSMMOG00000018693	esf1	99	60.269	Mola_mola
ENSSHAG00000000449	ESF1	100	82.974	ENSMODG00000005066	ESF1	100	85.132	Monodelphis_domestica
ENSSHAG00000000449	ESF1	74	74.324	ENSMALG00000007338	esf1	79	75.000	Monopterus_albus
ENSSHAG00000000449	ESF1	100	67.409	MGP_CAROLIEiJ_G0024365	Esf1	100	68.042	Mus_caroli
ENSSHAG00000000449	ESF1	100	66.510	ENSMUSG00000045624	Esf1	100	67.920	Mus_musculus
ENSSHAG00000000449	ESF1	100	67.803	MGP_PahariEiJ_G0025810	Esf1	100	67.723	Mus_pahari
ENSSHAG00000000449	ESF1	84	79.167	MGP_SPRETEiJ_G0025285	Esf1	99	77.181	Mus_spretus
ENSSHAG00000000449	ESF1	100	70.258	ENSMPUG00000001450	ESF1	100	70.023	Mustela_putorius_furo
ENSSHAG00000000449	ESF1	100	69.754	ENSMLUG00000013080	ESF1	100	69.519	Myotis_lucifugus
ENSSHAG00000000449	ESF1	100	68.409	ENSNLEG00000014563	ESF1	100	66.783	Nomascus_leucogenys
ENSSHAG00000000449	ESF1	67	100.000	ENSMEUG00000005061	-	72	80.383	Notamacropus_eugenii
ENSSHAG00000000449	ESF1	64	73.308	ENSOPRG00000004862	ESF1	91	85.932	Ochotona_princeps
ENSSHAG00000000449	ESF1	100	71.807	ENSODEG00000006824	ESF1	100	71.807	Octodon_degus
ENSSHAG00000000449	ESF1	83	74.026	ENSONIG00000006804	esf1	98	73.611	Oreochromis_niloticus
ENSSHAG00000000449	ESF1	100	70.858	ENSOANG00000008432	-	100	71.093	Ornithorhynchus_anatinus
ENSSHAG00000000449	ESF1	100	68.198	ENSOCUG00000005414	ESF1	100	67.491	Oryctolagus_cuniculus
ENSSHAG00000000449	ESF1	62	55.121	ENSORLG00000018625	esf1	99	55.218	Oryzias_latipes
ENSSHAG00000000449	ESF1	79	69.231	ENSORLG00015022826	esf1	91	68.056	Oryzias_latipes_hsok
ENSSHAG00000000449	ESF1	62	55.849	ENSOMEG00000009311	esf1	99	57.198	Oryzias_melastigma
ENSSHAG00000000449	ESF1	100	68.133	ENSOGAG00000016912	ESF1	100	68.133	Otolemur_garnettii
ENSSHAG00000000449	ESF1	70	78.873	ENSOARG00000011158	ESF1	100	66.742	Ovis_aries
ENSSHAG00000000449	ESF1	100	69.276	ENSPPAG00000024379	ESF1	100	69.616	Pan_paniscus
ENSSHAG00000000449	ESF1	100	70.198	ENSPPRG00000012007	ESF1	100	70.081	Panthera_pardus
ENSSHAG00000000449	ESF1	100	69.930	ENSPTIG00000020063	ESF1	100	69.464	Panthera_tigris_altaica
ENSSHAG00000000449	ESF1	100	68.598	ENSPTRG00000013258	ESF1	100	68.938	Pan_troglodytes
ENSSHAG00000000449	ESF1	100	54.002	ENSPKIG00000024448	esf1	96	54.664	Paramormyrops_kingsleyae
ENSSHAG00000000449	ESF1	79	62.338	ENSPMGG00000016911	esf1	87	62.500	Periophthalmus_magnuspinnatus
ENSSHAG00000000449	ESF1	100	88.875	ENSPCIG00000019331	ESF1	100	89.480	Phascolarctos_cinereus
ENSSHAG00000000449	ESF1	77	62.162	ENSPFOG00000010101	esf1	88	63.889	Poecilia_formosa
ENSSHAG00000000449	ESF1	63	56.093	ENSPLAG00000006452	esf1	99	57.367	Poecilia_latipinna
ENSSHAG00000000449	ESF1	80	63.514	ENSPMEG00000000713	esf1	89	63.889	Poecilia_mexicana
ENSSHAG00000000449	ESF1	77	62.162	ENSPREG00000004431	esf1	86	62.500	Poecilia_reticulata
ENSSHAG00000000449	ESF1	100	68.445	ENSPPYG00000010715	ESF1	100	68.525	Pongo_abelii
ENSSHAG00000000449	ESF1	100	64.896	ENSPCAG00000006881	ESF1	100	64.261	Procavia_capensis
ENSSHAG00000000449	ESF1	79	84.722	ENSPVAG00000001295	ESF1	76	84.722	Pteropus_vampyrus
ENSSHAG00000000449	ESF1	84	71.429	ENSPNYG00000015735	esf1	88	72.222	Pundamilia_nyererei
ENSSHAG00000000449	ESF1	79	66.216	ENSPNAG00000014721	esf1	88	66.667	Pygocentrus_nattereri
ENSSHAG00000000449	ESF1	100	68.787	ENSRNOG00000004777	Esf1	100	68.787	Rattus_norvegicus
ENSSHAG00000000449	ESF1	100	69.988	ENSRBIG00000035763	ESF1	100	70.692	Rhinopithecus_bieti
ENSSHAG00000000449	ESF1	100	70.175	ENSRROG00000032022	ESF1	100	70.877	Rhinopithecus_roxellana
ENSSHAG00000000449	ESF1	59	33.789	YDR365C	-	73	33.205	Saccharomyces_cerevisiae
ENSSHAG00000000449	ESF1	100	69.123	ENSSBOG00000030387	ESF1	100	70.175	Saimiri_boliviensis_boliviensis
ENSSHAG00000000449	ESF1	80	74.324	ENSSDUG00000019460	esf1	92	75.000	Seriola_dumerili
ENSSHAG00000000449	ESF1	100	63.986	ENSSPUG00000012635	ESF1	100	63.385	Sphenodon_punctatus
ENSSHAG00000000449	ESF1	80	73.077	ENSSPAG00000019077	esf1	87	73.611	Stegastes_partitus
ENSSHAG00000000449	ESF1	100	68.621	ENSSSCG00000007077	ESF1	100	68.397	Sus_scrofa
ENSSHAG00000000449	ESF1	79	72.310	ENSTGUG00000002450	ESF1	76	69.934	Taeniopygia_guttata
ENSSHAG00000000449	ESF1	80	75.362	ENSTRUG00000009445	esf1	88	70.833	Takifugu_rubripes
ENSSHAG00000000449	ESF1	57	83.333	ENSTBEG00000008552	ESF1	71	80.292	Tupaia_belangeri
ENSSHAG00000000449	ESF1	100	68.256	ENSTTRG00000005335	ESF1	100	68.177	Tursiops_truncatus
ENSSHAG00000000449	ESF1	100	68.765	ENSUMAG00000008579	ESF1	100	69.078	Ursus_maritimus
ENSSHAG00000000449	ESF1	92	79.918	ENSVPAG00000005291	ESF1	92	78.279	Vicugna_pacos
ENSSHAG00000000449	ESF1	100	70.141	ENSVVUG00000014318	ESF1	93	69.409	Vulpes_vulpes
ENSSHAG00000000449	ESF1	70	67.611	ENSXETG00000008079	esf1	100	61.322	Xenopus_tropicalis
ENSSHAG00000000449	ESF1	81	63.514	ENSXMAG00000017651	esf1	87	63.889	Xiphophorus_maculatus