EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000000533 (Gene tree)
Gene ID: 100928291
Gene Symbol: HLTF
Alias: HIP116A|HLTF1|RNF80|SMARCA3|SNF2L3
Full Name: helicase like transcription factor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 28938 bases
Position: chrGL849906.1:1572-30509
Accession: 11099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000599	DEAD	PF00270.29	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000608	HLTF-202	2813	-	ENSSHAP00000000599	925 (aa)	-	G3VBP5
ENSSHAT00000000607	HLTF-201	3056	-	ENSSHAP00000000598	1011 (aa)	-	G3VBP4

Gene Model

Click here to download ENSSHAG00000000533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000533	HLTF	86	59.504	ENSFHEG00000017298	hltf	92	59.504	Fundulus_heteroclitus
ENSSHAG00000000533	HLTF	84	60.300	ENSORLG00015017166	hltf	89	59.817	Oryzias_latipes_hsok
ENSSHAG00000000533	HLTF	84	57.356	ENSXCOG00000014232	hltf	95	57.356	Xiphophorus_couchianus