EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000561 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2655 bases
Position: chrGL861866.1:1745-4399
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000631	EST1	PF10374.9	1.3e-13	1	1
ENSSHAP00000000631	EST1_DNA_bind	PF10373.9	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000641	-	2655	-	ENSSHAP00000000631	885 (aa)	-	G3VBS7

Gene Model

Click here to download ENSSHAG00000000561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000561	-	86	33.943	ENSSHAG00000009572	-	77	33.943
ENSSHAG00000000561	-	78	79.857	ENSSHAG00000000935	-	100	79.429
ENSSHAG00000000561	-	85	39.698	ENSSHAG00000014163	SMG5	88	39.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000561	-	87	40.157	ENSG00000198952	SMG5	88	40.157	Homo_sapiens
ENSSHAG00000000561	-	88	35.696	ENSAPOG00000019690	smg5	77	36.434	Acanthochromis_polyacanthus
ENSSHAG00000000561	-	84	41.470	ENSAMEG00000014458	SMG5	88	40.420	Ailuropoda_melanoleuca
ENSSHAG00000000561	-	85	36.154	ENSACIG00000001353	smg5	75	36.667	Amphilophus_citrinellus
ENSSHAG00000000561	-	88	36.829	ENSAOCG00000019483	smg5	79	35.253	Amphiprion_ocellaris
ENSSHAG00000000561	-	90	35.253	ENSAPEG00000022949	smg5	81	35.253	Amphiprion_percula
ENSSHAG00000000561	-	89	36.804	ENSATEG00000005348	smg5	75	37.436	Anabas_testudineus
ENSSHAG00000000561	-	98	37.531	ENSAPLG00000010263	SMG5	77	38.000	Anas_platyrhynchos
ENSSHAG00000000561	-	87	40.420	ENSANAG00000032899	SMG5	86	40.420	Aotus_nancymaae
ENSSHAG00000000561	-	88	36.061	ENSACLG00000009311	smg5	77	36.317	Astatotilapia_calliptera
ENSSHAG00000000561	-	89	36.364	ENSAMXG00000024616	smg5	71	36.364	Astyanax_mexicanus
ENSSHAG00000000561	-	98	37.634	ENSBTAG00000021747	-	86	37.634	Bos_taurus
ENSSHAG00000000561	-	87	40.000	ENSBTAG00000009435	SMG5	88	39.633	Bos_taurus
ENSSHAG00000000561	-	87	40.682	ENSCJAG00000005684	SMG5	86	40.682	Callithrix_jacchus
ENSSHAG00000000561	-	87	40.157	ENSCAFG00000016839	SMG5	87	40.157	Canis_familiaris
ENSSHAG00000000561	-	87	40.157	ENSCAFG00020006061	SMG5	87	40.157	Canis_lupus_dingo
ENSSHAG00000000561	-	86	39.633	ENSCHIG00000007709	SMG5	88	39.633	Capra_hircus
ENSSHAG00000000561	-	98	38.196	ENSCHIG00000006323	-	87	38.196	Capra_hircus
ENSSHAG00000000561	-	87	40.157	ENSTSYG00000004099	SMG5	88	40.157	Carlito_syrichta
ENSSHAG00000000561	-	57	55.814	ENSCAPG00000003631	SMG5	55	51.064	Cavia_aperea
ENSSHAG00000000561	-	85	40.420	ENSCPOG00000015696	SMG5	86	40.420	Cavia_porcellus
ENSSHAG00000000561	-	87	40.849	ENSCCAG00000027409	SMG5	88	40.420	Cebus_capucinus
ENSSHAG00000000561	-	87	40.157	ENSCATG00000030539	SMG5	88	40.157	Cercocebus_atys
ENSSHAG00000000561	-	86	40.682	ENSCLAG00000003983	SMG5	88	40.682	Chinchilla_lanigera
ENSSHAG00000000561	-	87	39.895	ENSCSAG00000002120	SMG5	88	39.895	Chlorocebus_sabaeus
ENSSHAG00000000561	-	83	39.335	ENSCPBG00000025848	SMG5	87	37.018	Chrysemys_picta_bellii
ENSSHAG00000000561	-	87	39.305	ENSCANG00000029208	SMG5	87	39.305	Colobus_angolensis_palliatus
ENSSHAG00000000561	-	86	40.157	ENSCGRG00001006336	Smg5	85	39.793	Cricetulus_griseus_chok1gshd
ENSSHAG00000000561	-	85	40.157	ENSCGRG00000005111	Smg5	86	39.793	Cricetulus_griseus_crigri
ENSSHAG00000000561	-	88	36.667	ENSCSEG00000014220	smg5	80	36.300	Cynoglossus_semilaevis
ENSSHAG00000000561	-	85	33.245	ENSCVAG00000000529	smg5	77	33.245	Cyprinodon_variegatus
ENSSHAG00000000561	-	95	35.859	ENSDARG00000041481	smg5	70	36.272	Danio_rerio
ENSSHAG00000000561	-	82	40.054	ENSDNOG00000000051	SMG5	74	40.054	Dasypus_novemcinctus
ENSSHAG00000000561	-	76	34.328	ENSDNOG00000039862	-	75	34.328	Dasypus_novemcinctus
ENSSHAG00000000561	-	96	39.633	ENSDORG00000010382	Smg5	86	39.633	Dipodomys_ordii
ENSSHAG00000000561	-	67	49.438	ENSETEG00000010336	SMG5	64	49.438	Echinops_telfairi
ENSSHAG00000000561	-	76	34.527	ENSEBUG00000003739	smg5	74	34.783	Eptatretus_burgeri
ENSSHAG00000000561	-	86	39.633	ENSEASG00005019122	SMG5	86	39.633	Equus_asinus_asinus
ENSSHAG00000000561	-	86	39.895	ENSECAG00000001389	SMG5	86	39.895	Equus_caballus
ENSSHAG00000000561	-	80	40.751	ENSEEUG00000012690	SMG5	73	40.751	Erinaceus_europaeus
ENSSHAG00000000561	-	89	37.000	ENSELUG00000012585	smg5	77	37.750	Esox_lucius
ENSSHAG00000000561	-	86	40.420	ENSFCAG00000011783	SMG5	87	40.420	Felis_catus
ENSSHAG00000000561	-	55	34.706	ENSFALG00000001166	-	70	37.143	Ficedula_albicollis
ENSSHAG00000000561	-	96	39.108	ENSFDAG00000017388	SMG5	88	39.108	Fukomys_damarensis
ENSSHAG00000000561	-	94	30.510	ENSFHEG00000013939	smg5	73	36.712	Fundulus_heteroclitus
ENSSHAG00000000561	-	85	34.856	ENSGMOG00000007310	smg5	70	34.783	Gadus_morhua
ENSSHAG00000000561	-	88	37.990	ENSGALG00000029918	-	76	38.250	Gallus_gallus
ENSSHAG00000000561	-	78	35.821	ENSGAFG00000021691	smg5	69	35.821	Gambusia_affinis
ENSSHAG00000000561	-	87	35.751	ENSGACG00000013142	smg5	69	35.751	Gasterosteus_aculeatus
ENSSHAG00000000561	-	98	36.524	ENSGAGG00000016131	SMG5	78	37.018	Gopherus_agassizii
ENSSHAG00000000561	-	87	39.895	ENSGGOG00000010932	SMG5	88	39.895	Gorilla_gorilla
ENSSHAG00000000561	-	87	36.061	ENSHBUG00000008654	smg5	75	36.317	Haplochromis_burtoni
ENSSHAG00000000561	-	86	39.314	ENSHGLG00000019152	SMG5	88	39.314	Heterocephalus_glaber_female
ENSSHAG00000000561	-	73	39.378	ENSHGLG00100015948	SMG5	85	39.286	Heterocephalus_glaber_male
ENSSHAG00000000561	-	78	35.714	ENSHCOG00000010229	smg5	77	35.696	Hippocampus_comes
ENSSHAG00000000561	-	89	36.111	ENSIPUG00000006624	Smg5	70	36.111	Ictalurus_punctatus
ENSSHAG00000000561	-	87	40.420	ENSSTOG00000001780	SMG5	88	40.420	Ictidomys_tridecemlineatus
ENSSHAG00000000561	-	87	39.578	ENSJJAG00000022763	Smg5	87	39.578	Jaculus_jaculus
ENSSHAG00000000561	-	89	36.070	ENSKMAG00000014586	smg5	69	36.567	Kryptolebias_marmoratus
ENSSHAG00000000561	-	88	37.084	ENSLBEG00000002145	smg5	78	37.084	Labrus_bergylta
ENSSHAG00000000561	-	87	35.411	ENSLACG00000010521	SMG5	76	35.411	Latimeria_chalumnae
ENSSHAG00000000561	-	89	36.145	ENSLOCG00000008380	smg5	69	36.432	Lepisosteus_oculatus
ENSSHAG00000000561	-	85	39.633	ENSLAFG00000006241	SMG5	85	39.633	Loxodonta_africana
ENSSHAG00000000561	-	87	39.578	ENSMFAG00000045357	SMG5	88	39.578	Macaca_fascicularis
ENSSHAG00000000561	-	87	39.578	ENSMMUG00000000090	SMG5	88	39.578	Macaca_mulatta
ENSSHAG00000000561	-	87	39.314	ENSMNEG00000044425	SMG5	88	39.314	Macaca_nemestrina
ENSSHAG00000000561	-	87	38.182	ENSMLEG00000041192	SMG5	87	38.182	Mandrillus_leucophaeus
ENSSHAG00000000561	-	88	37.179	ENSMAMG00000010683	smg5	69	38.081	Mastacembelus_armatus
ENSSHAG00000000561	-	85	36.061	ENSMZEG00005015815	smg5	75	36.317	Maylandia_zebra
ENSSHAG00000000561	-	86	40.157	ENSMAUG00000010381	Smg5	85	39.793	Mesocricetus_auratus
ENSSHAG00000000561	-	87	40.157	ENSMICG00000002257	SMG5	86	40.157	Microcebus_murinus
ENSSHAG00000000561	-	86	38.958	ENSMOCG00000016590	Smg5	86	37.922	Microtus_ochrogaster
ENSSHAG00000000561	-	87	35.385	ENSMMOG00000017199	smg5	74	33.333	Mola_mola
ENSSHAG00000000561	-	97	49.598	ENSMODG00000004511	-	99	49.598	Monodelphis_domestica
ENSSHAG00000000561	-	99	45.838	ENSMODG00000004532	-	99	45.889	Monodelphis_domestica
ENSSHAG00000000561	-	84	40.964	ENSMODG00000016901	SMG5	83	40.800	Monodelphis_domestica
ENSSHAG00000000561	-	97	46.652	ENSMODG00000010675	-	99	46.652	Monodelphis_domestica
ENSSHAG00000000561	-	97	47.537	ENSMODG00000004735	-	99	46.652	Monodelphis_domestica
ENSSHAG00000000561	-	84	36.410	ENSMALG00000010375	smg5	68	36.410	Monopterus_albus
ENSSHAG00000000561	-	87	39.895	MGP_CAROLIEiJ_G0025163	Smg5	99	42.373	Mus_caroli
ENSSHAG00000000561	-	87	39.895	ENSMUSG00000001415	Smg5	98	42.373	Mus_musculus
ENSSHAG00000000561	-	86	39.633	MGP_PahariEiJ_G0026606	Smg5	99	41.808	Mus_pahari
ENSSHAG00000000561	-	87	39.895	MGP_SPRETEiJ_G0026104	Smg5	99	42.373	Mus_spretus
ENSSHAG00000000561	-	81	40.169	ENSMPUG00000004546	SMG5	87	39.633	Mustela_putorius_furo
ENSSHAG00000000561	-	86	40.157	ENSMLUG00000008518	SMG5	86	40.157	Myotis_lucifugus
ENSSHAG00000000561	-	86	40.420	ENSNGAG00000020706	Smg5	78	40.052	Nannospalax_galili
ENSSHAG00000000561	-	87	41.262	ENSNGAG00000012101	-	87	38.193	Nannospalax_galili
ENSSHAG00000000561	-	87	40.157	ENSNLEG00000012439	SMG5	88	40.157	Nomascus_leucogenys
ENSSHAG00000000561	-	85	39.896	ENSMEUG00000012834	SMG5	86	38.058	Notamacropus_eugenii
ENSSHAG00000000561	-	98	40.157	ENSOPRG00000009152	SMG5	87	40.157	Ochotona_princeps
ENSSHAG00000000561	-	98	40.420	ENSODEG00000012237	SMG5	87	40.420	Octodon_degus
ENSSHAG00000000561	-	88	36.061	ENSONIG00000008632	smg5	69	36.317	Oreochromis_niloticus
ENSSHAG00000000561	-	88	37.956	ENSOCUG00000023338	-	80	37.956	Oryctolagus_cuniculus
ENSSHAG00000000561	-	85	40.106	ENSOCUG00000012886	SMG5	88	40.106	Oryctolagus_cuniculus
ENSSHAG00000000561	-	86	36.562	ENSORLG00000016239	smg5	75	35.043	Oryzias_latipes
ENSSHAG00000000561	-	87	36.320	ENSORLG00020013127	smg5	98	31.617	Oryzias_latipes_hni
ENSSHAG00000000561	-	91	36.473	ENSORLG00015019014	smg5	82	36.099	Oryzias_latipes_hsok
ENSSHAG00000000561	-	65	37.532	ENSOMEG00000021330	smg5	73	32.500	Oryzias_melastigma
ENSSHAG00000000561	-	87	39.633	ENSOGAG00000004966	SMG5	88	39.175	Otolemur_garnettii
ENSSHAG00000000561	-	86	39.633	ENSOARG00000005778	SMG5	88	39.633	Ovis_aries
ENSSHAG00000000561	-	98	38.727	ENSOARG00000011963	-	87	38.727	Ovis_aries
ENSSHAG00000000561	-	87	40.157	ENSPPAG00000011996	SMG5	88	40.157	Pan_paniscus
ENSSHAG00000000561	-	85	40.420	ENSPPRG00000011901	SMG5	87	40.420	Panthera_pardus
ENSSHAG00000000561	-	97	34.067	ENSPTIG00000007892	SMG5	51	36.072	Panthera_tigris_altaica
ENSSHAG00000000561	-	87	40.157	ENSPTRG00000049282	-	88	40.157	Pan_troglodytes
ENSSHAG00000000561	-	87	40.157	ENSPTRG00000023925	SMG5	88	40.157	Pan_troglodytes
ENSSHAG00000000561	-	87	40.157	ENSPANG00000011201	SMG5	88	40.157	Papio_anubis
ENSSHAG00000000561	-	98	32.596	ENSPKIG00000009402	smg5	80	32.982	Paramormyrops_kingsleyae
ENSSHAG00000000561	-	98	36.272	ENSPSIG00000015198	SMG5	89	36.667	Pelodiscus_sinensis
ENSSHAG00000000561	-	86	36.409	ENSPMGG00000010465	smg5	72	36.409	Periophthalmus_magnuspinnatus
ENSSHAG00000000561	-	87	39.314	ENSPEMG00000001819	Smg5	87	39.793	Peromyscus_maniculatus_bairdii
ENSSHAG00000000561	-	84	33.420	ENSPMAG00000000410	smg5	75	33.938	Petromyzon_marinus
ENSSHAG00000000561	-	86	39.895	ENSPCIG00000018938	SMG5	86	39.895	Phascolarctos_cinereus
ENSSHAG00000000561	-	92	34.803	ENSPFOG00000010191	smg5	70	35.821	Poecilia_formosa
ENSSHAG00000000561	-	92	34.803	ENSPLAG00000009332	smg5	70	35.821	Poecilia_latipinna
ENSSHAG00000000561	-	92	34.803	ENSPMEG00000014105	smg5	75	35.821	Poecilia_mexicana
ENSSHAG00000000561	-	89	35.821	ENSPREG00000017713	smg5	70	35.821	Poecilia_reticulata
ENSSHAG00000000561	-	87	40.157	ENSPPYG00000000723	SMG5	88	40.157	Pongo_abelii
ENSSHAG00000000561	-	87	39.895	ENSPCOG00000004741	SMG5	88	39.895	Propithecus_coquereli
ENSSHAG00000000561	-	87	39.529	ENSPVAG00000016748	SMG5	87	39.323	Pteropus_vampyrus
ENSSHAG00000000561	-	87	36.061	ENSPNYG00000013397	smg5	68	36.317	Pundamilia_nyererei
ENSSHAG00000000561	-	90	36.364	ENSPNAG00000028363	smg5	70	36.776	Pygocentrus_nattereri
ENSSHAG00000000561	-	86	39.633	ENSRNOG00000019590	Smg5	85	39.276	Rattus_norvegicus
ENSSHAG00000000561	-	87	40.157	ENSRBIG00000027428	SMG5	88	40.157	Rhinopithecus_bieti
ENSSHAG00000000561	-	87	40.420	ENSRROG00000030035	SMG5	88	40.420	Rhinopithecus_roxellana
ENSSHAG00000000561	-	87	40.420	ENSSBOG00000033339	SMG5	88	40.420	Saimiri_boliviensis_boliviensis
ENSSHAG00000000561	-	88	36.616	ENSSFOG00015024175	smg5	75	36.616	Scleropages_formosus
ENSSHAG00000000561	-	88	36.573	ENSSMAG00000013059	smg5	69	36.829	Scophthalmus_maximus
ENSSHAG00000000561	-	88	36.203	ENSSDUG00000007122	smg5	69	36.709	Seriola_dumerili
ENSSHAG00000000561	-	88	36.573	ENSSLDG00000011418	smg5	75	33.780	Seriola_lalandi_dorsalis
ENSSHAG00000000561	-	75	38.849	ENSSARG00000012484	SMG5	86	39.068	Sorex_araneus
ENSSHAG00000000561	-	80	39.053	ENSSPUG00000002260	SMG5	74	39.053	Sphenodon_punctatus
ENSSHAG00000000561	-	87	36.548	ENSSPAG00000014266	smg5	78	34.895	Stegastes_partitus
ENSSHAG00000000561	-	78	37.067	ENSSSCG00000039308	-	85	37.067	Sus_scrofa
ENSSHAG00000000561	-	86	39.895	ENSSSCG00000006490	-	87	39.895	Sus_scrofa
ENSSHAG00000000561	-	98	37.037	ENSTGUG00000003748	-	76	38.918	Taeniopygia_guttata
ENSSHAG00000000561	-	90	37.076	ENSTRUG00000012580	smg5	75	37.076	Takifugu_rubripes
ENSSHAG00000000561	-	98	33.047	ENSTNIG00000010303	smg5	81	33.047	Tetraodon_nigroviridis
ENSSHAG00000000561	-	63	40.000	ENSTBEG00000002777	SMG5	56	40.000	Tupaia_belangeri
ENSSHAG00000000561	-	82	38.859	ENSTTRG00000001401	SMG5	82	37.008	Tursiops_truncatus
ENSSHAG00000000561	-	87	40.157	ENSUAMG00000013721	SMG5	87	40.157	Ursus_americanus
ENSSHAG00000000561	-	93	36.979	ENSUMAG00000018041	SMG5	86	38.259	Ursus_maritimus
ENSSHAG00000000561	-	77	45.161	ENSVPAG00000009446	SMG5	78	45.161	Vicugna_pacos
ENSSHAG00000000561	-	98	39.895	ENSVVUG00000005887	SMG5	87	39.895	Vulpes_vulpes
ENSSHAG00000000561	-	64	32.402	ENSXETG00000033791	SMG5	72	34.078	Xenopus_tropicalis
ENSSHAG00000000561	-	65	38.710	ENSXCOG00000004379	smg5	64	38.251	Xiphophorus_couchianus
ENSSHAG00000000561	-	88	36.317	ENSXMAG00000013499	smg5	76	36.132	Xiphophorus_maculatus