EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 894 bases
Position: chrGL848267.1:2055-2948
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000682	RRM_1	PF00076.22	1.9e-10	1	1
ENSSHAP00000000681	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000691	-	768	-	ENSSHAP00000000681	256 (aa)	-	G3VBX7
ENSSHAT00000000692	-	669	-	ENSSHAP00000000682	223 (aa)	-	G3VBX8

Gene Model

Click here to download ENSSHAG00000000609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000609	-	100	76.448	ENSSHAG00000012866	-	100	76.834
ENSSHAG00000000609	-	83	64.211	ENSSHAG00000010459	ALYREF	97	72.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000609	-	100	48.780	ENSAPOG00000000183	-	99	49.194	Acanthochromis_polyacanthus
ENSSHAG00000000609	-	99	42.366	ENSACIG00000020351	-	99	45.038	Amphilophus_citrinellus
ENSSHAG00000000609	-	99	53.114	ENSACIG00000006351	alyref	97	54.286	Amphilophus_citrinellus
ENSSHAG00000000609	-	100	46.215	ENSAOCG00000019305	-	99	48.996	Amphiprion_ocellaris
ENSSHAG00000000609	-	99	55.109	ENSAOCG00000014012	alyref	99	56.429	Amphiprion_ocellaris
ENSSHAG00000000609	-	99	55.311	ENSAPEG00000014603	alyref	99	56.429	Amphiprion_percula
ENSSHAG00000000609	-	100	45.817	ENSAPEG00000013527	-	99	49.593	Amphiprion_percula
ENSSHAG00000000609	-	99	53.597	ENSATEG00000004307	alyref	99	55.634	Anabas_testudineus
ENSSHAG00000000609	-	100	45.020	ENSATEG00000000382	-	99	46.429	Anabas_testudineus
ENSSHAG00000000609	-	57	62.222	ENSAPLG00000014745	-	98	71.852	Anas_platyrhynchos
ENSSHAG00000000609	-	98	45.098	ENSACLG00000010184	-	99	47.104	Astatotilapia_calliptera
ENSSHAG00000000609	-	99	54.182	ENSACLG00000008432	alyref	99	56.272	Astatotilapia_calliptera
ENSSHAG00000000609	-	99	53.597	ENSAMXG00000007359	alyref	99	58.007	Astyanax_mexicanus
ENSSHAG00000000609	-	99	36.727	ENSCING00000013568	-	99	39.437	Ciona_intestinalis
ENSSHAG00000000609	-	99	38.710	ENSCSAVG00000003324	-	99	40.511	Ciona_savignyi
ENSSHAG00000000609	-	99	53.285	ENSCSEG00000017800	alyref	99	58.065	Cynoglossus_semilaevis
ENSSHAG00000000609	-	98	43.775	ENSCVAG00000007789	-	97	46.058	Cyprinodon_variegatus
ENSSHAG00000000609	-	99	53.506	ENSCVAG00000014869	alyref	99	57.664	Cyprinodon_variegatus
ENSSHAG00000000609	-	99	51.916	ENSDARG00000077732	alyref	99	57.651	Danio_rerio
ENSSHAG00000000609	-	97	40.977	FBgn0010774	Ref1	74	42.929	Drosophila_melanogaster
ENSSHAG00000000609	-	99	39.914	ENSEBUG00000006305	alyref	99	40.506	Eptatretus_burgeri
ENSSHAG00000000609	-	100	43.411	ENSEBUG00000008253	alyref	96	43.060	Eptatretus_burgeri
ENSSHAG00000000609	-	99	55.926	ENSELUG00000017178	alyref	99	56.522	Esox_lucius
ENSSHAG00000000609	-	99	49.808	ENSELUG00000008849	-	99	52.549	Esox_lucius
ENSSHAG00000000609	-	66	61.963	ENSFALG00000011923	-	98	71.519	Ficedula_albicollis
ENSSHAG00000000609	-	99	52.985	ENSFHEG00000019426	alyref	99	55.914	Fundulus_heteroclitus
ENSSHAG00000000609	-	98	42.339	ENSFHEG00000004698	-	97	43.621	Fundulus_heteroclitus
ENSSHAG00000000609	-	99	54.340	ENSGMOG00000009882	alyref	99	53.933	Gadus_morhua
ENSSHAG00000000609	-	76	51.337	ENSGMOG00000013122	-	99	48.663	Gadus_morhua
ENSSHAG00000000609	-	98	43.673	ENSGAFG00000007573	-	97	44.628	Gambusia_affinis
ENSSHAG00000000609	-	99	51.264	ENSGAFG00000006014	alyref	99	54.745	Gambusia_affinis
ENSSHAG00000000609	-	98	41.636	ENSHBUG00000001454	-	99	47.148	Haplochromis_burtoni
ENSSHAG00000000609	-	99	54.182	ENSHBUG00000020196	alyref	99	56.272	Haplochromis_burtoni
ENSSHAG00000000609	-	99	43.701	ENSHCOG00000012825	-	95	46.032	Hippocampus_comes
ENSSHAG00000000609	-	99	56.089	ENSIPUG00000009469	alyref	98	60.902	Ictalurus_punctatus
ENSSHAG00000000609	-	83	60.215	ENSSTOG00000016570	-	98	65.405	Ictidomys_tridecemlineatus
ENSSHAG00000000609	-	100	45.238	ENSKMAG00000006462	-	99	45.565	Kryptolebias_marmoratus
ENSSHAG00000000609	-	99	52.482	ENSKMAG00000008912	alyref	99	56.940	Kryptolebias_marmoratus
ENSSHAG00000000609	-	99	43.359	ENSLBEG00000012930	-	99	47.561	Labrus_bergylta
ENSSHAG00000000609	-	99	58.300	ENSLBEG00000023118	alyref	89	58.468	Labrus_bergylta
ENSSHAG00000000609	-	99	40.942	ENSLBEG00000005387	-	99	42.910	Labrus_bergylta
ENSSHAG00000000609	-	87	52.995	ENSLOCG00000013879	alyref	90	58.182	Lepisosteus_oculatus
ENSSHAG00000000609	-	100	44.355	ENSMAMG00000005464	-	99	45.382	Mastacembelus_armatus
ENSSHAG00000000609	-	99	53.091	ENSMAMG00000003034	alyref	99	55.714	Mastacembelus_armatus
ENSSHAG00000000609	-	98	44.706	ENSMZEG00005012096	-	99	46.718	Maylandia_zebra
ENSSHAG00000000609	-	99	54.182	ENSMZEG00005008639	alyref	99	56.272	Maylandia_zebra
ENSSHAG00000000609	-	99	50.661	ENSMMOG00000007032	-	98	46.888	Mola_mola
ENSSHAG00000000609	-	99	53.597	ENSMMOG00000012458	alyref	96	56.884	Mola_mola
ENSSHAG00000000609	-	100	45.736	ENSMALG00000006054	-	99	45.736	Monopterus_albus
ENSSHAG00000000609	-	98	51.711	ENSMLUG00000022178	-	98	52.091	Myotis_lucifugus
ENSSHAG00000000609	-	98	53.731	ENSMLUG00000009247	-	98	52.612	Myotis_lucifugus
ENSSHAG00000000609	-	99	55.849	ENSMLUG00000014372	-	99	62.082	Myotis_lucifugus
ENSSHAG00000000609	-	98	47.794	ENSMLUG00000030671	-	98	54.373	Myotis_lucifugus
ENSSHAG00000000609	-	99	54.340	ENSMLUG00000004098	-	99	61.509	Myotis_lucifugus
ENSSHAG00000000609	-	85	57.286	ENSMLUG00000028605	-	99	50.368	Myotis_lucifugus
ENSSHAG00000000609	-	99	52.830	ENSMLUG00000006521	-	99	59.108	Myotis_lucifugus
ENSSHAG00000000609	-	98	50.181	ENSMLUG00000022467	-	99	50.730	Myotis_lucifugus
ENSSHAG00000000609	-	99	65.611	ENSNGAG00000022014	-	99	67.411	Nannospalax_galili
ENSSHAG00000000609	-	99	53.818	ENSNBRG00000001747	alyref	99	55.872	Neolamprologus_brichardi
ENSSHAG00000000609	-	99	44.186	ENSNBRG00000017460	-	99	46.183	Neolamprologus_brichardi
ENSSHAG00000000609	-	99	53.597	ENSONIG00000019434	alyref	99	56.338	Oreochromis_niloticus
ENSSHAG00000000609	-	98	46.614	ENSONIG00000003296	-	99	46.718	Oreochromis_niloticus
ENSSHAG00000000609	-	99	38.851	ENSORLG00000001620	-	58	45.274	Oryzias_latipes
ENSSHAG00000000609	-	99	53.704	ENSORLG00020011942	alyref	99	55.914	Oryzias_latipes_hni
ENSSHAG00000000609	-	100	42.146	ENSORLG00020015673	-	99	41.948	Oryzias_latipes_hni
ENSSHAG00000000609	-	99	54.244	ENSORLG00015022664	alyref	99	56.679	Oryzias_latipes_hsok
ENSSHAG00000000609	-	100	41.445	ENSORLG00015015143	-	99	41.758	Oryzias_latipes_hsok
ENSSHAG00000000609	-	99	52.708	ENSOMEG00000019176	alyref	99	55.435	Oryzias_melastigma
ENSSHAG00000000609	-	99	46.122	ENSOMEG00000007158	-	97	45.714	Oryzias_melastigma
ENSSHAG00000000609	-	77	75.141	ENSPPAG00000036403	-	68	76.000	Pan_paniscus
ENSSHAG00000000609	-	99	56.031	ENSPKIG00000007070	alyref	99	54.643	Paramormyrops_kingsleyae
ENSSHAG00000000609	-	99	54.198	ENSPKIG00000006233	-	80	58.661	Paramormyrops_kingsleyae
ENSSHAG00000000609	-	99	50.936	ENSPMGG00000016600	alyref	90	55.351	Periophthalmus_magnuspinnatus
ENSSHAG00000000609	-	69	48.235	ENSPMGG00000012994	-	98	48.824	Periophthalmus_magnuspinnatus
ENSSHAG00000000609	-	99	66.376	ENSPEMG00000016628	-	99	64.865	Peromyscus_maniculatus_bairdii
ENSSHAG00000000609	-	99	52.768	ENSPFOG00000022825	alyref	98	55.072	Poecilia_formosa
ENSSHAG00000000609	-	98	43.200	ENSPFOG00000017094	-	99	44.177	Poecilia_formosa
ENSSHAG00000000609	-	99	53.333	ENSPLAG00000006948	alyref	99	55.636	Poecilia_latipinna
ENSSHAG00000000609	-	98	43.200	ENSPLAG00000014380	-	99	44.177	Poecilia_latipinna
ENSSHAG00000000609	-	98	43.200	ENSPMEG00000023039	-	99	44.177	Poecilia_mexicana
ENSSHAG00000000609	-	99	52.963	ENSPMEG00000003547	alyref	99	55.072	Poecilia_mexicana
ENSSHAG00000000609	-	99	53.333	ENSPREG00000015795	alyref	99	55.273	Poecilia_reticulata
ENSSHAG00000000609	-	99	43.307	ENSPREG00000003649	-	99	44.082	Poecilia_reticulata
ENSSHAG00000000609	-	99	54.182	ENSPNYG00000017498	alyref	99	56.272	Pundamilia_nyererei
ENSSHAG00000000609	-	99	40.530	ENSPNYG00000002879	-	98	44.615	Pundamilia_nyererei
ENSSHAG00000000609	-	99	54.412	ENSPNAG00000002531	alyref	99	57.401	Pygocentrus_nattereri
ENSSHAG00000000609	-	83	71.354	ENSSBOG00000030924	-	88	72.727	Saimiri_boliviensis_boliviensis
ENSSHAG00000000609	-	87	61.244	ENSSFOG00015003923	alyref	73	65.686	Scleropages_formosus
ENSSHAG00000000609	-	77	67.403	ENSSFOG00015003678	alyref	83	63.536	Scleropages_formosus
ENSSHAG00000000609	-	99	54.212	ENSSMAG00000009283	alyref	99	56.584	Scophthalmus_maximus
ENSSHAG00000000609	-	98	44.061	ENSSMAG00000011169	-	100	47.778	Scophthalmus_maximus
ENSSHAG00000000609	-	99	54.015	ENSSDUG00000016158	alyref	99	56.071	Seriola_dumerili
ENSSHAG00000000609	-	99	53.091	ENSSLDG00000017803	alyref	99	55.872	Seriola_lalandi_dorsalis
ENSSHAG00000000609	-	99	46.063	ENSSPAG00000017028	-	96	48.988	Stegastes_partitus
ENSSHAG00000000609	-	99	44.400	ENSTRUG00000003051	-	99	44.800	Takifugu_rubripes
ENSSHAG00000000609	-	99	47.107	ENSTNIG00000014136	-	99	45.763	Tetraodon_nigroviridis
ENSSHAG00000000609	-	99	55.061	ENSTNIG00000011595	alyref	99	60.744	Tetraodon_nigroviridis
ENSSHAG00000000609	-	77	66.854	ENSVVUG00000000272	-	81	75.568	Vulpes_vulpes
ENSSHAG00000000609	-	99	51.449	ENSXCOG00000018047	alyref	98	54.945	Xiphophorus_couchianus
ENSSHAG00000000609	-	99	51.449	ENSXMAG00000012218	alyref	98	54.945	Xiphophorus_maculatus
ENSSHAG00000000609	-	99	41.667	ENSXMAG00000018086	-	97	46.091	Xiphophorus_maculatus