EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000758 (Gene tree)
Gene ID: 100928859
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 34821 bases
Position: chrGL834716.1:3403-38223
Accession: 100928859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000848	ResIII	PF04851.15	5.1e-26	1	2
ENSSHAP00000000848	ResIII	PF04851.15	5.1e-26	2	2
ENSSHAP00000000848	DEAD	PF00270.29	5.2e-53	1	2
ENSSHAP00000000848	DEAD	PF00270.29	5.2e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000858	SNRNP200-201	6326	XM_003758109	ENSSHAP00000000848	2067 (aa)	XP_003758157	G3VCE4

Gene Model

Click here to download ENSSHAG00000000758's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000758	SNRNP200	55	34.872	ENSSHAG00000014616	-	68	34.098
ENSSHAG00000000758	SNRNP200	89	42.270	ENSSHAG00000016496	ASCC3	80	44.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000758	SNRNP200	100	98.887	ENSG00000144028	SNRNP200	99	98.637	Homo_sapiens
ENSSHAG00000000758	SNRNP200	99	90.590	ENSAPOG00000010223	snrnp200	97	90.518	Acanthochromis_polyacanthus
ENSSHAG00000000758	SNRNP200	100	98.936	ENSAMEG00000008996	SNRNP200	97	98.936	Ailuropoda_melanoleuca
ENSSHAG00000000758	SNRNP200	99	90.168	ENSACIG00000001764	snrnp200	97	90.162	Amphilophus_citrinellus
ENSSHAG00000000758	SNRNP200	99	90.541	ENSAOCG00000024593	snrnp200	99	90.000	Amphiprion_ocellaris
ENSSHAG00000000758	SNRNP200	99	90.060	ENSAPEG00000012554	snrnp200	99	90.054	Amphiprion_percula
ENSSHAG00000000758	SNRNP200	99	90.492	ENSATEG00000022522	snrnp200	97	90.421	Anabas_testudineus
ENSSHAG00000000758	SNRNP200	100	97.436	ENSAPLG00000004313	SNRNP200	97	97.436	Anas_platyrhynchos
ENSSHAG00000000758	SNRNP200	99	97.210	ENSACAG00000000434	SNRNP200	96	97.210	Anolis_carolinensis
ENSSHAG00000000758	SNRNP200	100	94.169	ENSANAG00000036625	SNRNP200	97	94.602	Aotus_nancymaae
ENSSHAG00000000758	SNRNP200	99	90.249	ENSACLG00000011188	snrnp200	97	90.179	Astatotilapia_calliptera
ENSSHAG00000000758	SNRNP200	99	90.219	ENSAMXG00000005684	snrnp200	97	90.131	Astyanax_mexicanus
ENSSHAG00000000758	SNRNP200	100	98.403	ENSBTAG00000000848	SNRNP200	97	98.403	Bos_taurus
ENSSHAG00000000758	SNRNP200	100	98.839	ENSCJAG00000007514	SNRNP200	97	98.839	Callithrix_jacchus
ENSSHAG00000000758	SNRNP200	100	98.120	ENSCAFG00020019979	SNRNP200	100	98.950	Canis_lupus_dingo
ENSSHAG00000000758	SNRNP200	100	98.597	ENSCHIG00000020611	SNRNP200	97	98.597	Capra_hircus
ENSSHAG00000000758	SNRNP200	100	98.936	ENSTSYG00000010467	SNRNP200	97	98.936	Carlito_syrichta
ENSSHAG00000000758	SNRNP200	100	98.456	ENSCAPG00000017234	SNRNP200	97	98.456	Cavia_aperea
ENSSHAG00000000758	SNRNP200	100	98.694	ENSCPOG00000006776	SNRNP200	97	98.694	Cavia_porcellus
ENSSHAG00000000758	SNRNP200	100	98.839	ENSCCAG00000033962	SNRNP200	97	98.839	Cebus_capucinus
ENSSHAG00000000758	SNRNP200	100	98.887	ENSCATG00000015790	SNRNP200	97	98.887	Cercocebus_atys
ENSSHAG00000000758	SNRNP200	100	98.645	ENSCLAG00000004116	SNRNP200	97	98.645	Chinchilla_lanigera
ENSSHAG00000000758	SNRNP200	100	98.839	ENSCSAG00000017369	SNRNP200	97	98.839	Chlorocebus_sabaeus
ENSSHAG00000000758	SNRNP200	74	98.403	ENSCHOG00000012981	-	56	98.403	Choloepus_hoffmanni
ENSSHAG00000000758	SNRNP200	100	97.729	ENSCPBG00000022571	SNRNP200	99	100.000	Chrysemys_picta_bellii
ENSSHAG00000000758	SNRNP200	99	76.641	ENSCING00000005082	-	97	76.786	Ciona_intestinalis
ENSSHAG00000000758	SNRNP200	97	98.855	ENSCANG00000033932	SNRNP200	100	98.855	Colobus_angolensis_palliatus
ENSSHAG00000000758	SNRNP200	100	98.742	ENSCGRG00001022610	Snrnp200	97	98.742	Cricetulus_griseus_chok1gshd
ENSSHAG00000000758	SNRNP200	100	98.164	ENSCGRG00000016472	Snrnp200	97	98.164	Cricetulus_griseus_crigri
ENSSHAG00000000758	SNRNP200	99	89.670	ENSCSEG00000016399	snrnp200	97	89.647	Cynoglossus_semilaevis
ENSSHAG00000000758	SNRNP200	99	85.471	ENSCVAG00000017631	snrnp200	97	85.486	Cyprinodon_variegatus
ENSSHAG00000000758	SNRNP200	99	90.058	ENSDARG00000077536	snrnp200	97	90.034	Danio_rerio
ENSSHAG00000000758	SNRNP200	100	97.291	ENSDNOG00000011227	SNRNP200	97	97.291	Dasypus_novemcinctus
ENSSHAG00000000758	SNRNP200	100	96.087	ENSDORG00000005861	Snrnp200	97	96.087	Dipodomys_ordii
ENSSHAG00000000758	SNRNP200	100	74.122	FBgn0263599	l(3)72Ab	97	74.026	Drosophila_melanogaster
ENSSHAG00000000758	SNRNP200	95	98.718	ENSETEG00000000162	SNRNP200	71	98.718	Echinops_telfairi
ENSSHAG00000000758	SNRNP200	86	81.076	ENSEBUG00000016524	snrnp200	95	81.076	Eptatretus_burgeri
ENSSHAG00000000758	SNRNP200	99	98.024	ENSEASG00005001884	SNRNP200	97	98.024	Equus_asinus_asinus
ENSSHAG00000000758	SNRNP200	100	98.936	ENSECAG00000019675	SNRNP200	97	98.936	Equus_caballus
ENSSHAG00000000758	SNRNP200	89	97.511	ENSEEUG00000012178	SNRNP200	91	97.511	Erinaceus_europaeus
ENSSHAG00000000758	SNRNP200	99	90.511	ENSELUG00000018948	snrnp200	97	90.421	Esox_lucius
ENSSHAG00000000758	SNRNP200	100	98.984	ENSFCAG00000010699	SNRNP200	97	98.984	Felis_catus
ENSSHAG00000000758	SNRNP200	94	89.518	ENSFALG00000001368	-	93	89.518	Ficedula_albicollis
ENSSHAG00000000758	SNRNP200	100	98.645	ENSFDAG00000004683	SNRNP200	97	98.645	Fukomys_damarensis
ENSSHAG00000000758	SNRNP200	99	87.707	ENSFHEG00000003786	snrnp200	97	87.712	Fundulus_heteroclitus
ENSSHAG00000000758	SNRNP200	99	89.588	ENSGMOG00000004881	snrnp200	97	89.614	Gadus_morhua
ENSSHAG00000000758	SNRNP200	99	87.949	ENSGAFG00000010807	snrnp200	97	87.954	Gambusia_affinis
ENSSHAG00000000758	SNRNP200	99	90.068	ENSGACG00000011474	snrnp200	96	90.097	Gasterosteus_aculeatus
ENSSHAG00000000758	SNRNP200	94	97.789	ENSGAGG00000016069	SNRNP200	98	96.855	Gopherus_agassizii
ENSSHAG00000000758	SNRNP200	100	98.887	ENSGGOG00000005174	SNRNP200	97	98.887	Gorilla_gorilla
ENSSHAG00000000758	SNRNP200	99	87.757	ENSHBUG00000011322	snrnp200	99	87.763	Haplochromis_burtoni
ENSSHAG00000000758	SNRNP200	100	98.694	ENSHGLG00000006654	SNRNP200	97	98.694	Heterocephalus_glaber_female
ENSSHAG00000000758	SNRNP200	100	98.694	ENSHGLG00100018594	SNRNP200	97	98.694	Heterocephalus_glaber_male
ENSSHAG00000000758	SNRNP200	100	98.887	ENSSTOG00000016351	SNRNP200	97	98.887	Ictidomys_tridecemlineatus
ENSSHAG00000000758	SNRNP200	100	98.742	ENSJJAG00000023659	Snrnp200	97	98.742	Jaculus_jaculus
ENSSHAG00000000758	SNRNP200	99	87.215	ENSKMAG00000003665	snrnp200	97	87.223	Kryptolebias_marmoratus
ENSSHAG00000000758	SNRNP200	99	90.136	ENSLBEG00000021585	snrnp200	97	90.131	Labrus_bergylta
ENSSHAG00000000758	SNRNP200	85	94.282	ENSLACG00000000226	SNRNP200	99	94.722	Latimeria_chalumnae
ENSSHAG00000000758	SNRNP200	99	92.192	ENSLOCG00000015198	snrnp200	97	92.163	Lepisosteus_oculatus
ENSSHAG00000000758	SNRNP200	100	98.645	ENSLAFG00000015626	SNRNP200	97	98.645	Loxodonta_africana
ENSSHAG00000000758	SNRNP200	100	98.839	ENSMFAG00000040174	SNRNP200	99	98.830	Macaca_fascicularis
ENSSHAG00000000758	SNRNP200	100	98.839	ENSMMUG00000023261	SNRNP200	97	98.839	Macaca_mulatta
ENSSHAG00000000758	SNRNP200	100	98.791	ENSMNEG00000032398	SNRNP200	97	98.791	Macaca_nemestrina
ENSSHAG00000000758	SNRNP200	100	98.887	ENSMLEG00000019083	SNRNP200	99	98.830	Mandrillus_leucophaeus
ENSSHAG00000000758	SNRNP200	99	89.898	ENSMAMG00000007851	snrnp200	97	89.845	Mastacembelus_armatus
ENSSHAG00000000758	SNRNP200	99	87.757	ENSMZEG00005010787	snrnp200	99	87.763	Maylandia_zebra
ENSSHAG00000000758	SNRNP200	100	97.194	ENSMGAG00000001831	SNRNP200	100	97.194	Meleagris_gallopavo
ENSSHAG00000000758	SNRNP200	100	98.791	ENSMAUG00000011825	Snrnp200	97	98.791	Mesocricetus_auratus
ENSSHAG00000000758	SNRNP200	100	98.936	ENSMICG00000004710	SNRNP200	98	98.592	Microcebus_murinus
ENSSHAG00000000758	SNRNP200	100	96.130	ENSMOCG00000011814	Snrnp200	97	96.130	Microtus_ochrogaster
ENSSHAG00000000758	SNRNP200	99	88.640	ENSMMOG00000014167	snrnp200	97	88.582	Mola_mola
ENSSHAG00000000758	SNRNP200	100	99.226	ENSMODG00000008475	SNRNP200	97	99.226	Monodelphis_domestica
ENSSHAG00000000758	SNRNP200	99	90.630	ENSMALG00000001973	snrnp200	97	90.614	Monopterus_albus
ENSSHAG00000000758	SNRNP200	100	98.597	MGP_CAROLIEiJ_G0024250	Snrnp200	97	98.597	Mus_caroli
ENSSHAG00000000758	SNRNP200	100	98.645	ENSMUSG00000003660	Snrnp200	97	98.645	Mus_musculus
ENSSHAG00000000758	SNRNP200	100	98.694	MGP_PahariEiJ_G0025695	Snrnp200	97	98.694	Mus_pahari
ENSSHAG00000000758	SNRNP200	100	98.645	MGP_SPRETEiJ_G0025170	Snrnp200	97	98.645	Mus_spretus
ENSSHAG00000000758	SNRNP200	100	98.984	ENSMPUG00000008949	SNRNP200	97	98.984	Mustela_putorius_furo
ENSSHAG00000000758	SNRNP200	99	95.005	ENSMLUG00000027511	-	97	94.969	Myotis_lucifugus
ENSSHAG00000000758	SNRNP200	100	98.454	ENSMLUG00000010493	SNRNP200	97	98.454	Myotis_lucifugus
ENSSHAG00000000758	SNRNP200	100	98.887	ENSNGAG00000021993	Snrnp200	97	98.887	Nannospalax_galili
ENSSHAG00000000758	SNRNP200	93	90.261	ENSNBRG00000017960	snrnp200	98	90.313	Neolamprologus_brichardi
ENSSHAG00000000758	SNRNP200	99	93.934	ENSNLEG00000000025	SNRNP200	97	94.044	Nomascus_leucogenys
ENSSHAG00000000758	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	75	100.000	Notamacropus_eugenii
ENSSHAG00000000758	SNRNP200	99	97.531	ENSOPRG00000015464	SNRNP200	97	97.531	Ochotona_princeps
ENSSHAG00000000758	SNRNP200	100	98.694	ENSODEG00000008366	SNRNP200	97	98.694	Octodon_degus
ENSSHAG00000000758	SNRNP200	99	90.200	ENSONIG00000010714	snrnp200	97	90.131	Oreochromis_niloticus
ENSSHAG00000000758	SNRNP200	100	98.742	ENSOCUG00000009864	SNRNP200	97	98.742	Oryctolagus_cuniculus
ENSSHAG00000000758	SNRNP200	99	90.146	ENSORLG00000012286	snrnp200	100	90.112	Oryzias_latipes
ENSSHAG00000000758	SNRNP200	99	90.097	ENSORLG00020004648	snrnp200	97	90.082	Oryzias_latipes_hni
ENSSHAG00000000758	SNRNP200	99	90.049	ENSORLG00015019114	snrnp200	100	90.134	Oryzias_latipes_hsok
ENSSHAG00000000758	SNRNP200	99	90.258	ENSOMEG00000011834	snrnp200	97	90.179	Oryzias_melastigma
ENSSHAG00000000758	SNRNP200	100	98.936	ENSOGAG00000006879	SNRNP200	97	98.936	Otolemur_garnettii
ENSSHAG00000000758	SNRNP200	100	97.534	ENSOARG00000013949	SNRNP200	97	97.534	Ovis_aries
ENSSHAG00000000758	SNRNP200	100	98.887	ENSPPAG00000041559	SNRNP200	97	98.887	Pan_paniscus
ENSSHAG00000000758	SNRNP200	100	98.984	ENSPPRG00000004435	SNRNP200	97	98.984	Panthera_pardus
ENSSHAG00000000758	SNRNP200	100	98.500	ENSPTIG00000006380	SNRNP200	97	98.500	Panthera_tigris_altaica
ENSSHAG00000000758	SNRNP200	100	98.887	ENSPTRG00000012230	SNRNP200	97	98.887	Pan_troglodytes
ENSSHAG00000000758	SNRNP200	100	98.839	ENSPANG00000006017	SNRNP200	97	98.839	Papio_anubis
ENSSHAG00000000758	SNRNP200	99	91.028	ENSPKIG00000014762	snrnp200	99	90.989	Paramormyrops_kingsleyae
ENSSHAG00000000758	SNRNP200	100	96.712	ENSPSIG00000008580	SNRNP200	97	96.712	Pelodiscus_sinensis
ENSSHAG00000000758	SNRNP200	100	99.952	ENSPCIG00000023050	SNRNP200	97	99.952	Phascolarctos_cinereus
ENSSHAG00000000758	SNRNP200	99	90.335	ENSPFOG00000015110	snrnp200	97	90.377	Poecilia_formosa
ENSSHAG00000000758	SNRNP200	99	90.128	ENSPLAG00000006711	snrnp200	98	90.122	Poecilia_latipinna
ENSSHAG00000000758	SNRNP200	99	90.073	ENSPMEG00000021166	snrnp200	98	90.067	Poecilia_mexicana
ENSSHAG00000000758	SNRNP200	99	90.428	ENSPREG00000008875	snrnp200	97	90.421	Poecilia_reticulata
ENSSHAG00000000758	SNRNP200	100	98.887	ENSPPYG00000012068	SNRNP200	97	98.887	Pongo_abelii
ENSSHAG00000000758	SNRNP200	95	99.048	ENSPCAG00000008536	SNRNP200	83	99.048	Procavia_capensis
ENSSHAG00000000758	SNRNP200	100	98.887	ENSPCOG00000024608	SNRNP200	97	98.887	Propithecus_coquereli
ENSSHAG00000000758	SNRNP200	96	99.556	ENSPVAG00000005860	SNRNP200	89	99.556	Pteropus_vampyrus
ENSSHAG00000000758	SNRNP200	99	85.610	ENSPNYG00000017476	snrnp200	97	85.576	Pundamilia_nyererei
ENSSHAG00000000758	SNRNP200	99	85.597	ENSPNAG00000010998	snrnp200	97	85.583	Pygocentrus_nattereri
ENSSHAG00000000758	SNRNP200	100	98.791	ENSRNOG00000012157	Snrnp200	97	98.791	Rattus_norvegicus
ENSSHAG00000000758	SNRNP200	100	98.887	ENSRBIG00000044690	-	97	98.887	Rhinopithecus_bieti
ENSSHAG00000000758	SNRNP200	100	98.887	ENSRROG00000037952	-	97	98.887	Rhinopithecus_roxellana
ENSSHAG00000000758	SNRNP200	100	98.839	ENSSBOG00000035471	SNRNP200	97	98.839	Saimiri_boliviensis_boliviensis
ENSSHAG00000000758	SNRNP200	99	91.046	ENSSFOG00015018826	snrnp200	97	90.953	Scleropages_formosus
ENSSHAG00000000758	SNRNP200	99	90.200	ENSSMAG00000005463	snrnp200	98	90.211	Scophthalmus_maximus
ENSSHAG00000000758	SNRNP200	99	90.444	ENSSDUG00000021410	snrnp200	97	90.373	Seriola_dumerili
ENSSHAG00000000758	SNRNP200	99	90.444	ENSSLDG00000010884	snrnp200	97	90.373	Seriola_lalandi_dorsalis
ENSSHAG00000000758	SNRNP200	95	98.355	ENSSARG00000010728	SNRNP200	92	98.355	Sorex_araneus
ENSSHAG00000000758	SNRNP200	100	97.339	ENSSPUG00000003726	-	97	97.339	Sphenodon_punctatus
ENSSHAG00000000758	SNRNP200	99	90.492	ENSSPAG00000001842	snrnp200	97	90.427	Stegastes_partitus
ENSSHAG00000000758	SNRNP200	100	98.791	ENSSSCG00000008127	SNRNP200	98	98.920	Sus_scrofa
ENSSHAG00000000758	SNRNP200	99	87.142	ENSTGUG00000014475	-	97	87.119	Taeniopygia_guttata
ENSSHAG00000000758	SNRNP200	99	90.102	ENSTRUG00000001307	snrnp200	97	90.034	Takifugu_rubripes
ENSSHAG00000000758	SNRNP200	99	85.431	ENSTNIG00000004320	snrnp200	97	85.453	Tetraodon_nigroviridis
ENSSHAG00000000758	SNRNP200	82	100.000	ENSTBEG00000003329	-	63	100.000	Tupaia_belangeri
ENSSHAG00000000758	SNRNP200	100	98.597	ENSTTRG00000004983	SNRNP200	97	98.597	Tursiops_truncatus
ENSSHAG00000000758	SNRNP200	74	91.441	ENSUAMG00000008395	-	88	91.381	Ursus_americanus
ENSSHAG00000000758	SNRNP200	100	98.984	ENSUMAG00000012385	SNRNP200	97	98.984	Ursus_maritimus
ENSSHAG00000000758	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	66	100.000	Vicugna_pacos
ENSSHAG00000000758	SNRNP200	100	98.745	ENSVVUG00000026247	SNRNP200	98	99.189	Vulpes_vulpes
ENSSHAG00000000758	SNRNP200	99	94.286	ENSXETG00000001243	snrnp200	97	94.251	Xenopus_tropicalis
ENSSHAG00000000758	SNRNP200	99	90.386	ENSXMAG00000002058	snrnp200	97	90.378	Xiphophorus_maculatus