EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000843 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2900 bases
Position: chrGL862007.1:4135-7034
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000000944	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000000955	-	737	-	ENSSHAP00000000944	235 (aa)	-	G3VCP0

Gene Model

Click here to download ENSSHAG00000000843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000843	-	94	50.222	ENSSHAG00000010554	-	76	50.222
ENSSHAG00000000843	-	85	46.000	ENSSHAG00000000612	-	67	46.000
ENSSHAG00000000843	-	85	45.500	ENSSHAG00000009322	-	84	45.500
ENSSHAG00000000843	-	83	51.759	ENSSHAG00000000570	-	74	51.759
ENSSHAG00000000843	-	83	51.256	ENSSHAG00000005895	-	85	51.256
ENSSHAG00000000843	-	83	45.408	ENSSHAG00000008887	-	69	45.408
ENSSHAG00000000843	-	80	49.714	ENSSHAG00000011315	-	57	49.714
ENSSHAG00000000843	-	84	47.000	ENSSHAG00000000786	-	71	47.000
ENSSHAG00000000843	-	83	47.236	ENSSHAG00000008260	-	87	47.236
ENSSHAG00000000843	-	83	47.208	ENSSHAG00000000842	-	60	47.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000843	-	94	56.731	ENSG00000281887	GIMAP1-GIMAP5	67	56.731	Homo_sapiens
ENSSHAG00000000843	-	88	56.731	ENSG00000196329	GIMAP5	68	56.731	Homo_sapiens
ENSSHAG00000000843	-	83	50.254	ENSAPLG00000001066	-	80	50.254	Anas_platyrhynchos
ENSSHAG00000000843	-	81	42.667	ENSACAG00000016727	-	71	42.667	Anolis_carolinensis
ENSSHAG00000000843	-	83	50.761	ENSACAG00000028535	-	72	50.761	Anolis_carolinensis
ENSSHAG00000000843	-	79	43.850	ENSACAG00000017193	-	83	43.850	Anolis_carolinensis
ENSSHAG00000000843	-	77	52.486	ENSACAG00000016862	-	88	52.486	Anolis_carolinensis
ENSSHAG00000000843	-	94	54.222	ENSBTAG00000004894	-	86	56.522	Bos_taurus
ENSSHAG00000000843	-	100	52.101	ENSBTAG00000000715	-	74	52.101	Bos_taurus
ENSSHAG00000000843	-	86	53.883	ENSBTAG00000039588	-	69	53.883	Bos_taurus
ENSSHAG00000000843	-	94	51.339	ENSCJAG00000020126	-	73	51.339	Callithrix_jacchus
ENSSHAG00000000843	-	97	55.652	ENSCAFG00000024817	-	67	55.652	Canis_familiaris
ENSSHAG00000000843	-	90	56.542	ENSCAFG00020006487	-	76	60.204	Canis_lupus_dingo
ENSSHAG00000000843	-	94	54.222	ENSCHIG00000000431	-	72	54.222	Capra_hircus
ENSSHAG00000000843	-	88	55.450	ENSCHIG00000013093	-	71	55.450	Capra_hircus
ENSSHAG00000000843	-	86	56.796	ENSCHIG00000020434	-	87	55.435	Capra_hircus
ENSSHAG00000000843	-	86	57.767	ENSCHIG00000000607	-	69	57.767	Capra_hircus
ENSSHAG00000000843	-	94	57.589	ENSTSYG00000010016	-	75	57.589	Carlito_syrichta
ENSSHAG00000000843	-	84	57.576	ENSCAPG00000007631	-	64	57.576	Cavia_aperea
ENSSHAG00000000843	-	84	58.081	ENSCPOG00000003376	-	64	58.081	Cavia_porcellus
ENSSHAG00000000843	-	94	53.125	ENSCCAG00000009203	-	73	53.125	Cebus_capucinus
ENSSHAG00000000843	-	100	51.883	ENSCLAG00000001322	-	74	51.883	Chinchilla_lanigera
ENSSHAG00000000843	-	84	57.576	ENSCLAG00000001246	-	64	57.576	Chinchilla_lanigera
ENSSHAG00000000843	-	97	54.348	ENSCSAG00000006865	-	71	54.348	Chlorocebus_sabaeus
ENSSHAG00000000843	-	79	55.080	ENSCPBG00000005548	-	64	55.080	Chrysemys_picta_bellii
ENSSHAG00000000843	-	94	52.232	ENSCANG00000029802	-	73	52.232	Colobus_angolensis_palliatus
ENSSHAG00000000843	-	94	48.214	ENSCGRG00001024196	-	72	48.214	Cricetulus_griseus_chok1gshd
ENSSHAG00000000843	-	85	51.500	ENSCGRG00001024272	-	66	51.500	Cricetulus_griseus_chok1gshd
ENSSHAG00000000843	-	94	48.214	ENSCGRG00000015177	-	72	48.214	Cricetulus_griseus_crigri
ENSSHAG00000000843	-	85	52.000	ENSCGRG00000014686	-	66	52.000	Cricetulus_griseus_crigri
ENSSHAG00000000843	-	95	53.097	ENSECAG00000007663	-	72	53.097	Equus_caballus
ENSSHAG00000000843	-	100	54.202	ENSECAG00000007668	-	74	54.202	Equus_caballus
ENSSHAG00000000843	-	95	53.304	ENSECAG00000029716	-	72	53.304	Equus_caballus
ENSSHAG00000000843	-	84	55.556	ENSEEUG00000006852	-	71	55.556	Erinaceus_europaeus
ENSSHAG00000000843	-	85	58.000	ENSFCAG00000042622	-	65	58.000	Felis_catus
ENSSHAG00000000843	-	82	50.515	ENSGAGG00000015825	-	68	50.515	Gopherus_agassizii
ENSSHAG00000000843	-	80	53.723	ENSGAGG00000015829	-	88	53.723	Gopherus_agassizii
ENSSHAG00000000843	-	94	56.250	ENSGGOG00000014216	-	74	52.609	Gorilla_gorilla
ENSSHAG00000000843	-	89	53.991	ENSSTOG00000021076	-	69	53.991	Ictidomys_tridecemlineatus
ENSSHAG00000000843	-	89	34.518	ENSKMAG00000007013	-	81	34.518	Kryptolebias_marmoratus
ENSSHAG00000000843	-	97	53.478	ENSMFAG00000044951	-	71	53.478	Macaca_fascicularis
ENSSHAG00000000843	-	97	53.043	ENSMMUG00000001270	-	85	43.038	Macaca_mulatta
ENSSHAG00000000843	-	94	54.018	ENSMNEG00000028821	-	73	54.018	Macaca_nemestrina
ENSSHAG00000000843	-	94	54.464	ENSMLEG00000029622	-	73	54.464	Mandrillus_leucophaeus
ENSSHAG00000000843	-	94	53.571	ENSMICG00000035983	-	72	53.571	Microcebus_murinus
ENSSHAG00000000843	-	94	54.054	ENSMICG00000027282	-	71	54.054	Microcebus_murinus
ENSSHAG00000000843	-	94	48.661	ENSMOCG00000002213	-	99	48.661	Microtus_ochrogaster
ENSSHAG00000000843	-	84	52.525	ENSMOCG00000018608	-	67	52.525	Microtus_ochrogaster
ENSSHAG00000000843	-	100	74.468	ENSMODG00000003669	-	73	74.468	Monodelphis_domestica
ENSSHAG00000000843	-	83	55.330	MGP_CAROLIEiJ_G0028355	Gimap3	65	55.330	Mus_caroli
ENSSHAG00000000843	-	94	50.224	MGP_CAROLIEiJ_G0028354	Gimap5	72	50.224	Mus_caroli
ENSSHAG00000000843	-	94	50.673	ENSMUSG00000043505	Gimap5	72	50.673	Mus_musculus
ENSSHAG00000000843	-	85	54.500	ENSMUSG00000039264	Gimap3	66	54.500	Mus_musculus
ENSSHAG00000000843	-	84	55.051	MGP_PahariEiJ_G0022105	Gimap3	66	55.051	Mus_pahari
ENSSHAG00000000843	-	86	52.970	MGP_PahariEiJ_G0022104	Gimap5	66	52.970	Mus_pahari
ENSSHAG00000000843	-	94	53.571	ENSMLUG00000007287	-	72	53.571	Myotis_lucifugus
ENSSHAG00000000843	-	84	53.960	ENSMLUG00000025954	-	96	53.960	Myotis_lucifugus
ENSSHAG00000000843	-	96	50.877	ENSMLUG00000028966	-	74	50.877	Myotis_lucifugus
ENSSHAG00000000843	-	85	52.239	ENSMLUG00000026545	-	66	52.239	Myotis_lucifugus
ENSSHAG00000000843	-	83	56.853	ENSMLUG00000023466	-	69	56.853	Myotis_lucifugus
ENSSHAG00000000843	-	97	39.655	ENSMLUG00000022809	-	84	39.655	Myotis_lucifugus
ENSSHAG00000000843	-	84	57.071	ENSNGAG00000022013	-	64	57.071	Nannospalax_galili
ENSSHAG00000000843	-	90	53.991	ENSNGAG00000020526	-	71	53.991	Nannospalax_galili
ENSSHAG00000000843	-	88	57.212	ENSNLEG00000003844	-	68	57.212	Nomascus_leucogenys
ENSSHAG00000000843	-	83	82.143	ENSMEUG00000000849	-	72	82.143	Notamacropus_eugenii
ENSSHAG00000000843	-	83	80.612	ENSMEUG00000016596	-	72	80.612	Notamacropus_eugenii
ENSSHAG00000000843	-	94	52.252	ENSODEG00000011306	-	72	52.252	Octodon_degus
ENSSHAG00000000843	-	85	55.500	ENSOCUG00000025892	-	86	55.500	Oryctolagus_cuniculus
ENSSHAG00000000843	-	85	55.224	ENSOCUG00000005976	-	64	55.224	Oryctolagus_cuniculus
ENSSHAG00000000843	-	83	60.406	ENSOGAG00000009145	-	64	60.406	Otolemur_garnettii
ENSSHAG00000000843	-	96	52.261	ENSOARG00000001183	-	96	52.261	Ovis_aries
ENSSHAG00000000843	-	96	54.585	ENSOARG00000001589	-	66	54.585	Ovis_aries
ENSSHAG00000000843	-	96	54.148	ENSOARG00000001288	-	73	54.148	Ovis_aries
ENSSHAG00000000843	-	85	57.500	ENSOARG00000001645	-	65	57.214	Ovis_aries
ENSSHAG00000000843	-	94	56.731	ENSPPAG00000042001	-	73	53.043	Pan_paniscus
ENSSHAG00000000843	-	85	59.500	ENSPPRG00000017393	-	65	59.500	Panthera_pardus
ENSSHAG00000000843	-	85	59.500	ENSPTIG00000012405	-	65	59.500	Panthera_tigris_altaica
ENSSHAG00000000843	-	94	56.731	ENSPTRG00000028356	-	73	53.043	Pan_troglodytes
ENSSHAG00000000843	-	94	56.731	ENSPTRG00000034465	GIMAP1	73	53.043	Pan_troglodytes
ENSSHAG00000000843	-	94	54.911	ENSPANG00000030896	-	73	54.911	Papio_anubis
ENSSHAG00000000843	-	83	55.556	ENSPSIG00000000508	-	77	55.556	Pelodiscus_sinensis
ENSSHAG00000000843	-	55	58.140	ENSPSIG00000004906	-	84	58.140	Pelodiscus_sinensis
ENSSHAG00000000843	-	83	46.701	ENSPSIG00000016016	-	62	46.701	Pelodiscus_sinensis
ENSSHAG00000000843	-	83	49.746	ENSPSIG00000000573	-	82	49.746	Pelodiscus_sinensis
ENSSHAG00000000843	-	83	44.231	ENSPSIG00000006796	-	96	47.475	Pelodiscus_sinensis
ENSSHAG00000000843	-	88	54.589	ENSPSIG00000013467	-	90	54.589	Pelodiscus_sinensis
ENSSHAG00000000843	-	83	53.807	ENSPEMG00000014554	-	66	53.807	Peromyscus_maniculatus_bairdii
ENSSHAG00000000843	-	89	51.415	ENSPEMG00000019236	-	70	51.415	Peromyscus_maniculatus_bairdii
ENSSHAG00000000843	-	100	77.447	ENSPCIG00000008658	-	73	77.447	Phascolarctos_cinereus
ENSSHAG00000000843	-	81	46.354	ENSPCIG00000001766	-	68	46.354	Phascolarctos_cinereus
ENSSHAG00000000843	-	94	53.304	ENSPPYG00000018173	-	69	53.304	Pongo_abelii
ENSSHAG00000000843	-	94	55.804	ENSPCOG00000016811	-	72	55.804	Propithecus_coquereli
ENSSHAG00000000843	-	94	49.776	ENSRNOG00000008416	Gimap5	96	39.394	Rattus_norvegicus
ENSSHAG00000000843	-	94	53.125	ENSRBIG00000035290	-	73	53.125	Rhinopithecus_bieti
ENSSHAG00000000843	-	97	52.174	ENSRROG00000028817	-	71	52.174	Rhinopithecus_roxellana
ENSSHAG00000000843	-	94	52.679	ENSSBOG00000032164	-	73	52.679	Saimiri_boliviensis_boliviensis
ENSSHAG00000000843	-	84	53.266	ENSSARG00000004634	-	75	49.327	Sorex_araneus
ENSSHAG00000000843	-	83	56.122	ENSSPUG00000009760	-	89	56.122	Sphenodon_punctatus
ENSSHAG00000000843	-	85	52.736	ENSSPUG00000003272	-	50	52.736	Sphenodon_punctatus
ENSSHAG00000000843	-	85	53.731	ENSSPUG00000009848	-	70	53.731	Sphenodon_punctatus
ENSSHAG00000000843	-	81	48.438	ENSSPUG00000009907	-	87	48.438	Sphenodon_punctatus
ENSSHAG00000000843	-	100	47.177	ENSSPUG00000009833	-	87	50.220	Sphenodon_punctatus
ENSSHAG00000000843	-	100	51.037	ENSSPUG00000010063	-	80	50.847	Sphenodon_punctatus
ENSSHAG00000000843	-	79	51.337	ENSSPUG00000009917	-	58	51.579	Sphenodon_punctatus
ENSSHAG00000000843	-	69	58.537	ENSSPUG00000014119	-	75	58.537	Sphenodon_punctatus
ENSSHAG00000000843	-	91	48.131	ENSSPUG00000010046	-	73	48.131	Sphenodon_punctatus
ENSSHAG00000000843	-	85	53.731	ENSSPUG00000010036	-	69	53.731	Sphenodon_punctatus
ENSSHAG00000000843	-	100	51.261	ENSSSCG00000039407	-	74	51.261	Sus_scrofa
ENSSHAG00000000843	-	87	57.282	ENSTBEG00000000035	-	68	57.282	Tupaia_belangeri
ENSSHAG00000000843	-	94	50.667	ENSTTRG00000003204	-	76	50.667	Tursiops_truncatus
ENSSHAG00000000843	-	87	52.913	ENSTTRG00000011008	-	85	52.913	Tursiops_truncatus
ENSSHAG00000000843	-	96	52.838	ENSUMAG00000018133	-	75	52.838	Ursus_maritimus
ENSSHAG00000000843	-	83	57.868	ENSVPAG00000011693	-	73	52.679	Vicugna_pacos