EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000000935 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2082 bases
Position: chrGL864296.1:4959-7040
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001046	EST1	PF10374.9	7.6e-14	1	1
ENSSHAP00000001046	EST1_DNA_bind	PF10373.9	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001060	-	2082	-	ENSSHAP00000001046	694 (aa)	-	G3VCZ2

Gene Model

Click here to download ENSSHAG00000000935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000000935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000000935	-	96	38.164	ENSSHAG00000014163	SMG5	65	41.379
ENSSHAG00000000935	-	100	79.429	ENSSHAG00000000561	-	78	79.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000000935	-	82	40.854	ENSG00000198952	SMG5	64	39.766	Homo_sapiens
ENSSHAG00000000935	-	81	35.949	ENSAPOG00000019690	smg5	55	36.623	Acanthochromis_polyacanthus
ENSSHAG00000000935	-	79	40.994	ENSAMEG00000014458	SMG5	65	40.120	Ailuropoda_melanoleuca
ENSSHAG00000000935	-	79	36.410	ENSACIG00000001353	smg5	54	36.410	Amphilophus_citrinellus
ENSSHAG00000000935	-	84	35.529	ENSAOCG00000019483	smg5	63	33.682	Amphiprion_ocellaris
ENSSHAG00000000935	-	84	35.529	ENSAPEG00000022949	smg5	64	33.682	Amphiprion_percula
ENSSHAG00000000935	-	86	35.849	ENSATEG00000005348	smg5	57	35.294	Anabas_testudineus
ENSSHAG00000000935	-	84	37.931	ENSAPLG00000010263	SMG5	56	37.931	Anas_platyrhynchos
ENSSHAG00000000935	-	82	40.244	ENSANAG00000032899	SMG5	64	39.181	Aotus_nancymaae
ENSSHAG00000000935	-	81	36.061	ENSACLG00000009311	smg5	56	36.061	Astatotilapia_calliptera
ENSSHAG00000000935	-	89	35.135	ENSAMXG00000024616	smg5	58	34.773	Astyanax_mexicanus
ENSSHAG00000000935	-	97	36.673	ENSBTAG00000021747	-	64	39.877	Bos_taurus
ENSSHAG00000000935	-	82	40.244	ENSBTAG00000009435	SMG5	65	39.181	Bos_taurus
ENSSHAG00000000935	-	92	40.854	ENSCJAG00000005684	SMG5	67	39.766	Callithrix_jacchus
ENSSHAG00000000935	-	92	41.463	ENSCAFG00000016839	SMG5	64	40.351	Canis_familiaris
ENSSHAG00000000935	-	92	41.463	ENSCAFG00020006061	SMG5	64	40.351	Canis_lupus_dingo
ENSSHAG00000000935	-	80	40.244	ENSCHIG00000007709	SMG5	64	39.181	Capra_hircus
ENSSHAG00000000935	-	97	39.264	ENSCHIG00000006323	-	56	39.949	Capra_hircus
ENSSHAG00000000935	-	96	40.854	ENSTSYG00000004099	SMG5	64	39.766	Carlito_syrichta
ENSSHAG00000000935	-	60	39.024	ENSCAPG00000003631	SMG5	61	38.235	Cavia_aperea
ENSSHAG00000000935	-	82	40.854	ENSCPOG00000015696	SMG5	64	39.766	Cavia_porcellus
ENSSHAG00000000935	-	92	40.854	ENSCCAG00000027409	SMG5	65	39.766	Cebus_capucinus
ENSSHAG00000000935	-	82	40.854	ENSCATG00000030539	SMG5	64	39.766	Cercocebus_atys
ENSSHAG00000000935	-	82	40.854	ENSCLAG00000003983	SMG5	64	39.766	Chinchilla_lanigera
ENSSHAG00000000935	-	82	40.244	ENSCSAG00000002120	SMG5	64	39.181	Chlorocebus_sabaeus
ENSSHAG00000000935	-	77	38.483	ENSCPBG00000025848	SMG5	53	38.506	Chrysemys_picta_bellii
ENSSHAG00000000935	-	75	44.348	ENSCANG00000029208	SMG5	61	42.623	Colobus_angolensis_palliatus
ENSSHAG00000000935	-	81	40.854	ENSCGRG00001006336	Smg5	64	40.351	Cricetulus_griseus_chok1gshd
ENSSHAG00000000935	-	61	38.902	ENSCGRG00001000584	-	91	36.419	Cricetulus_griseus_chok1gshd
ENSSHAG00000000935	-	64	37.472	ENSCGRG00000009566	-	98	37.637	Cricetulus_griseus_crigri
ENSSHAG00000000935	-	80	40.854	ENSCGRG00000005111	Smg5	65	40.351	Cricetulus_griseus_crigri
ENSSHAG00000000935	-	83	35.468	ENSCSEG00000014220	smg5	57	35.381	Cynoglossus_semilaevis
ENSSHAG00000000935	-	82	35.821	ENSDARG00000041481	smg5	52	35.821	Danio_rerio
ENSSHAG00000000935	-	73	40.678	ENSDNOG00000000051	SMG5	64	38.690	Dasypus_novemcinctus
ENSSHAG00000000935	-	74	38.037	ENSDNOG00000039862	-	57	38.750	Dasypus_novemcinctus
ENSSHAG00000000935	-	92	40.854	ENSDORG00000010382	Smg5	64	39.766	Dipodomys_ordii
ENSSHAG00000000935	-	68	37.267	ENSETEG00000010336	SMG5	53	37.500	Echinops_telfairi
ENSSHAG00000000935	-	78	33.079	ENSEBUG00000003739	smg5	67	31.250	Eptatretus_burgeri
ENSSHAG00000000935	-	82	40.244	ENSEASG00005019122	SMG5	64	39.181	Equus_asinus_asinus
ENSSHAG00000000935	-	82	40.854	ENSECAG00000001389	SMG5	64	39.766	Equus_caballus
ENSSHAG00000000935	-	73	41.463	ENSEEUG00000012690	SMG5	52	41.040	Erinaceus_europaeus
ENSSHAG00000000935	-	83	37.250	ENSELUG00000012585	smg5	56	37.500	Esox_lucius
ENSSHAG00000000935	-	80	40.617	ENSFCAG00000011783	SMG5	65	38.889	Felis_catus
ENSSHAG00000000935	-	57	37.965	ENSFALG00000001166	-	79	35.551	Ficedula_albicollis
ENSSHAG00000000935	-	91	40.854	ENSFDAG00000017388	SMG5	65	39.766	Fukomys_damarensis
ENSSHAG00000000935	-	66	36.486	ENSFHEG00000013939	smg5	51	35.733	Fundulus_heteroclitus
ENSSHAG00000000935	-	82	35.266	ENSGMOG00000007310	smg5	52	35.024	Gadus_morhua
ENSSHAG00000000935	-	84	38.824	ENSGALG00000029918	-	63	37.572	Gallus_gallus
ENSSHAG00000000935	-	81	35.751	ENSGACG00000013142	smg5	50	35.751	Gasterosteus_aculeatus
ENSSHAG00000000935	-	84	38.725	ENSGAGG00000016131	SMG5	55	38.725	Gopherus_agassizii
ENSSHAG00000000935	-	82	40.244	ENSGGOG00000010932	SMG5	64	39.181	Gorilla_gorilla
ENSSHAG00000000935	-	81	36.061	ENSHBUG00000008654	smg5	55	36.061	Haplochromis_burtoni
ENSSHAG00000000935	-	92	40.854	ENSHGLG00000019152	SMG5	64	40.000	Heterocephalus_glaber_female
ENSSHAG00000000935	-	92	40.854	ENSHGLG00100015948	SMG5	71	40.000	Heterocephalus_glaber_male
ENSSHAG00000000935	-	82	36.160	ENSIPUG00000006624	Smg5	52	36.160	Ictalurus_punctatus
ENSSHAG00000000935	-	92	42.073	ENSSTOG00000001780	SMG5	64	40.936	Ictidomys_tridecemlineatus
ENSSHAG00000000935	-	91	40.123	ENSJJAG00000022763	Smg5	64	38.596	Jaculus_jaculus
ENSSHAG00000000935	-	82	36.318	ENSKMAG00000014586	smg5	51	36.318	Kryptolebias_marmoratus
ENSSHAG00000000935	-	83	36.320	ENSLBEG00000002145	smg5	66	34.091	Labrus_bergylta
ENSSHAG00000000935	-	82	36.224	ENSLACG00000010521	SMG5	54	36.224	Latimeria_chalumnae
ENSSHAG00000000935	-	81	36.496	ENSLOCG00000008380	smg5	68	34.549	Lepisosteus_oculatus
ENSSHAG00000000935	-	92	39.634	ENSLAFG00000006241	SMG5	64	38.596	Loxodonta_africana
ENSSHAG00000000935	-	82	40.854	ENSMFAG00000045357	SMG5	64	39.766	Macaca_fascicularis
ENSSHAG00000000935	-	92	40.854	ENSMMUG00000000090	SMG5	64	39.766	Macaca_mulatta
ENSSHAG00000000935	-	82	40.244	ENSMNEG00000044425	SMG5	64	39.181	Macaca_nemestrina
ENSSHAG00000000935	-	82	36.310	ENSMLEG00000041192	SMG5	63	36.517	Mandrillus_leucophaeus
ENSSHAG00000000935	-	78	37.179	ENSMAMG00000010683	smg5	50	37.692	Mastacembelus_armatus
ENSSHAG00000000935	-	79	36.061	ENSMZEG00005015815	smg5	56	36.061	Maylandia_zebra
ENSSHAG00000000935	-	92	41.463	ENSMAUG00000010381	Smg5	64	40.936	Mesocricetus_auratus
ENSSHAG00000000935	-	60	39.019	ENSMAUG00000000043	-	83	38.085	Mesocricetus_auratus
ENSSHAG00000000935	-	82	40.244	ENSMICG00000002257	SMG5	64	39.181	Microcebus_murinus
ENSSHAG00000000935	-	59	40.528	ENSMOCG00000008423	-	81	39.186	Microtus_ochrogaster
ENSSHAG00000000935	-	97	40.244	ENSMOCG00000016590	Smg5	66	39.766	Microtus_ochrogaster
ENSSHAG00000000935	-	82	35.036	ENSMMOG00000017199	smg5	52	35.036	Mola_mola
ENSSHAG00000000935	-	95	46.697	ENSMODG00000010675	-	76	46.697	Monodelphis_domestica
ENSSHAG00000000935	-	97	38.164	ENSMODG00000016901	SMG5	73	41.954	Monodelphis_domestica
ENSSHAG00000000935	-	92	46.501	ENSMODG00000004532	-	75	46.285	Monodelphis_domestica
ENSSHAG00000000935	-	95	57.927	ENSMODG00000004511	-	78	57.927	Monodelphis_domestica
ENSSHAG00000000935	-	95	46.908	ENSMODG00000004735	-	77	46.908	Monodelphis_domestica
ENSSHAG00000000935	-	55	46.512	ENSMODG00000021488	-	96	46.512	Monodelphis_domestica
ENSSHAG00000000935	-	79	35.897	ENSMALG00000010375	smg5	50	35.897	Monopterus_albus
ENSSHAG00000000935	-	97	40.244	MGP_CAROLIEiJ_G0025163	Smg5	99	41.243	Mus_caroli
ENSSHAG00000000935	-	92	40.244	ENSMUSG00000001415	Smg5	98	41.243	Mus_musculus
ENSSHAG00000000935	-	92	40.244	MGP_PahariEiJ_G0026606	Smg5	99	40.678	Mus_pahari
ENSSHAG00000000935	-	92	40.244	MGP_SPRETEiJ_G0026104	Smg5	99	41.243	Mus_spretus
ENSSHAG00000000935	-	73	40.994	ENSMPUG00000004546	SMG5	63	40.120	Mustela_putorius_furo
ENSSHAG00000000935	-	82	42.073	ENSMLUG00000008518	SMG5	64	40.936	Myotis_lucifugus
ENSSHAG00000000935	-	84	40.093	ENSNGAG00000012101	-	66	39.521	Nannospalax_galili
ENSSHAG00000000935	-	81	41.463	ENSNGAG00000020706	Smg5	64	40.936	Nannospalax_galili
ENSSHAG00000000935	-	82	40.854	ENSNLEG00000012439	SMG5	64	39.766	Nomascus_leucogenys
ENSSHAG00000000935	-	85	39.120	ENSMEUG00000012834	SMG5	65	40.805	Notamacropus_eugenii
ENSSHAG00000000935	-	92	42.683	ENSOPRG00000009152	SMG5	64	41.520	Ochotona_princeps
ENSSHAG00000000935	-	92	40.854	ENSODEG00000012237	SMG5	64	39.766	Octodon_degus
ENSSHAG00000000935	-	81	36.061	ENSONIG00000008632	smg5	50	36.061	Oreochromis_niloticus
ENSSHAG00000000935	-	91	40.854	ENSOCUG00000012886	SMG5	65	39.766	Oryctolagus_cuniculus
ENSSHAG00000000935	-	88	36.715	ENSOCUG00000023338	-	66	39.264	Oryctolagus_cuniculus
ENSSHAG00000000935	-	79	37.500	ENSORLG00000016239	smg5	53	36.493	Oryzias_latipes
ENSSHAG00000000935	-	88	35.831	ENSORLG00020013127	smg5	66	34.316	Oryzias_latipes_hni
ENSSHAG00000000935	-	88	35.981	ENSORLG00015019014	smg5	65	34.316	Oryzias_latipes_hsok
ENSSHAG00000000935	-	84	36.754	ENSOMEG00000021330	smg5	63	34.398	Oryzias_melastigma
ENSSHAG00000000935	-	92	40.854	ENSOGAG00000004966	SMG5	64	40.000	Otolemur_garnettii
ENSSHAG00000000935	-	97	39.877	ENSOARG00000011963	-	56	39.877	Ovis_aries
ENSSHAG00000000935	-	80	40.244	ENSOARG00000005778	SMG5	64	39.181	Ovis_aries
ENSSHAG00000000935	-	82	40.854	ENSPPAG00000011996	SMG5	64	39.766	Pan_paniscus
ENSSHAG00000000935	-	92	39.655	ENSPPRG00000011901	SMG5	66	38.889	Panthera_pardus
ENSSHAG00000000935	-	76	39.535	ENSPTIG00000007892	SMG5	62	40.000	Panthera_tigris_altaica
ENSSHAG00000000935	-	82	40.854	ENSPTRG00000023925	SMG5	64	39.766	Pan_troglodytes
ENSSHAG00000000935	-	82	40.854	ENSPTRG00000049282	-	64	39.766	Pan_troglodytes
ENSSHAG00000000935	-	82	40.854	ENSPANG00000011201	SMG5	64	39.766	Papio_anubis
ENSSHAG00000000935	-	83	36.869	ENSPKIG00000009402	smg5	56	36.364	Paramormyrops_kingsleyae
ENSSHAG00000000935	-	83	38.806	ENSPSIG00000015198	SMG5	57	38.806	Pelodiscus_sinensis
ENSSHAG00000000935	-	80	36.667	ENSPMGG00000010465	smg5	51	36.667	Periophthalmus_magnuspinnatus
ENSSHAG00000000935	-	56	41.709	ENSPEMG00000010022	-	82	38.511	Peromyscus_maniculatus_bairdii
ENSSHAG00000000935	-	81	40.854	ENSPEMG00000001819	Smg5	64	40.351	Peromyscus_maniculatus_bairdii
ENSSHAG00000000935	-	93	33.161	ENSPMAG00000000410	smg5	55	33.679	Petromyzon_marinus
ENSSHAG00000000935	-	85	39.798	ENSPCIG00000018938	SMG5	65	41.379	Phascolarctos_cinereus
ENSSHAG00000000935	-	82	35.872	ENSPFOG00000010191	smg5	52	35.872	Poecilia_formosa
ENSSHAG00000000935	-	82	35.872	ENSPLAG00000009332	smg5	52	35.627	Poecilia_latipinna
ENSSHAG00000000935	-	82	35.872	ENSPMEG00000014105	smg5	56	35.872	Poecilia_mexicana
ENSSHAG00000000935	-	82	35.872	ENSPREG00000017713	smg5	52	35.872	Poecilia_reticulata
ENSSHAG00000000935	-	82	40.854	ENSPPYG00000000723	SMG5	64	39.766	Pongo_abelii
ENSSHAG00000000935	-	96	39.634	ENSPCOG00000004741	SMG5	64	38.596	Propithecus_coquereli
ENSSHAG00000000935	-	81	39.506	ENSPVAG00000016748	SMG5	64	38.922	Pteropus_vampyrus
ENSSHAG00000000935	-	97	31.610	ENSPNYG00000013397	smg5	60	31.683	Pundamilia_nyererei
ENSSHAG00000000935	-	88	35.664	ENSPNAG00000028363	smg5	57	35.177	Pygocentrus_nattereri
ENSSHAG00000000935	-	92	40.244	ENSRNOG00000019590	Smg5	64	39.766	Rattus_norvegicus
ENSSHAG00000000935	-	82	40.854	ENSRBIG00000027428	SMG5	64	39.766	Rhinopithecus_bieti
ENSSHAG00000000935	-	82	40.854	ENSRROG00000030035	SMG5	64	39.766	Rhinopithecus_roxellana
ENSSHAG00000000935	-	92	40.854	ENSSBOG00000033339	SMG5	64	39.766	Saimiri_boliviensis_boliviensis
ENSSHAG00000000935	-	88	35.765	ENSSFOG00015024175	smg5	55	36.869	Scleropages_formosus
ENSSHAG00000000935	-	81	36.573	ENSSMAG00000013059	smg5	50	36.317	Scophthalmus_maximus
ENSSHAG00000000935	-	81	36.456	ENSSDUG00000007122	smg5	50	36.456	Seriola_dumerili
ENSSHAG00000000935	-	81	36.829	ENSSLDG00000011418	smg5	50	36.829	Seriola_lalandi_dorsalis
ENSSHAG00000000935	-	82	37.778	ENSSARG00000012484	SMG5	72	37.778	Sorex_araneus
ENSSHAG00000000935	-	78	38.372	ENSSPUG00000002260	SMG5	64	38.506	Sphenodon_punctatus
ENSSHAG00000000935	-	83	36.598	ENSSPAG00000014266	smg5	55	36.598	Stegastes_partitus
ENSSHAG00000000935	-	75	37.195	ENSSSCG00000039308	-	63	37.195	Sus_scrofa
ENSSHAG00000000935	-	82	40.854	ENSSSCG00000006490	-	63	42.623	Sus_scrofa
ENSSHAG00000000935	-	84	37.713	ENSTGUG00000003748	-	64	37.714	Taeniopygia_guttata
ENSSHAG00000000935	-	81	37.280	ENSTRUG00000012580	smg5	54	37.859	Takifugu_rubripes
ENSSHAG00000000935	-	79	37.760	ENSTNIG00000010303	smg5	54	37.760	Tetraodon_nigroviridis
ENSSHAG00000000935	-	86	40.854	ENSTTRG00000001401	SMG5	61	39.766	Tursiops_truncatus
ENSSHAG00000000935	-	92	39.024	ENSUAMG00000013721	SMG5	64	38.235	Ursus_americanus
ENSSHAG00000000935	-	84	42.609	ENSUMAG00000018041	SMG5	61	40.984	Ursus_maritimus
ENSSHAG00000000935	-	84	43.478	ENSVPAG00000009446	SMG5	60	41.803	Vicugna_pacos
ENSSHAG00000000935	-	92	40.854	ENSVVUG00000005887	SMG5	64	39.766	Vulpes_vulpes
ENSSHAG00000000935	-	82	35.697	ENSXMAG00000013499	smg5	57	35.697	Xiphophorus_maculatus