EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000001026 (Gene tree)
Gene ID: 100913960
Gene Symbol: POP7
Alias: RPP2|RPP20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 429 bases
Position: chrGL857628.1:6082-6510
Accession: 100913960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001150	Alba	PF01918.21	1.7e-10	1	1
ENSSHAP00000001150	Rpp20	PF12328.8	7.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001165	POP7-201	429	-	ENSSHAP00000001150	142 (aa)	XP_012405731	G3VD96

Gene Model

Click here to download ENSSHAG00000001026's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001026	POP7	100	88.028	ENSG00000172336	POP7	100	86.620	Homo_sapiens
ENSSHAG00000001026	POP7	92	73.485	ENSAPOG00000015722	pop7	91	74.046	Acanthochromis_polyacanthus
ENSSHAG00000001026	POP7	87	76.190	ENSACIG00000022071	pop7	88	76.190	Amphilophus_citrinellus
ENSSHAG00000001026	POP7	91	74.046	ENSAOCG00000021222	pop7	82	74.046	Amphiprion_ocellaris
ENSSHAG00000001026	POP7	91	74.046	ENSAPEG00000018819	pop7	82	74.046	Amphiprion_percula
ENSSHAG00000001026	POP7	92	73.485	ENSATEG00000017615	pop7	83	73.485	Anabas_testudineus
ENSSHAG00000001026	POP7	100	88.028	ENSANAG00000019054	POP7	100	86.620	Aotus_nancymaae
ENSSHAG00000001026	POP7	87	76.190	ENSACLG00000018898	pop7	79	76.190	Astatotilapia_calliptera
ENSSHAG00000001026	POP7	87	76.800	ENSAMXG00000025789	pop7	84	76.800	Astyanax_mexicanus
ENSSHAG00000001026	POP7	100	88.732	ENSCJAG00000015056	POP7	100	87.324	Callithrix_jacchus
ENSSHAG00000001026	POP7	100	88.732	ENSCAFG00000014205	POP7	100	87.324	Canis_familiaris
ENSSHAG00000001026	POP7	100	88.732	ENSCAFG00020013863	POP7	100	87.324	Canis_lupus_dingo
ENSSHAG00000001026	POP7	100	88.028	ENSCHIG00000013484	POP7	100	86.620	Capra_hircus
ENSSHAG00000001026	POP7	100	87.324	ENSTSYG00000035016	POP7	100	86.620	Carlito_syrichta
ENSSHAG00000001026	POP7	100	89.437	ENSCPOG00000005767	POP7	100	88.028	Cavia_porcellus
ENSSHAG00000001026	POP7	100	88.732	ENSCCAG00000008898	POP7	100	87.324	Cebus_capucinus
ENSSHAG00000001026	POP7	100	87.324	ENSCATG00000010371	POP7	100	85.915	Cercocebus_atys
ENSSHAG00000001026	POP7	100	89.437	ENSCLAG00000001541	POP7	100	88.028	Chinchilla_lanigera
ENSSHAG00000001026	POP7	100	87.324	ENSCSAG00000017937	POP7	100	85.915	Chlorocebus_sabaeus
ENSSHAG00000001026	POP7	100	88.028	ENSCANG00000000652	POP7	100	86.620	Colobus_angolensis_palliatus
ENSSHAG00000001026	POP7	100	88.732	ENSCGRG00001010593	Pop7	100	87.324	Cricetulus_griseus_chok1gshd
ENSSHAG00000001026	POP7	100	88.732	ENSCGRG00000019940	Pop7	100	87.324	Cricetulus_griseus_crigri
ENSSHAG00000001026	POP7	92	73.485	ENSCSEG00000013197	pop7	96	74.046	Cynoglossus_semilaevis
ENSSHAG00000001026	POP7	94	71.324	ENSCVAG00000016728	pop7	85	71.324	Cyprinodon_variegatus
ENSSHAG00000001026	POP7	90	70.000	ENSDARG00000036394	pop7	82	70.000	Danio_rerio
ENSSHAG00000001026	POP7	100	88.732	ENSDNOG00000031207	POP7	64	87.324	Dasypus_novemcinctus
ENSSHAG00000001026	POP7	100	87.324	ENSDORG00000012512	Pop7	100	86.620	Dipodomys_ordii
ENSSHAG00000001026	POP7	80	43.220	FBgn0066304	Rpp20	66	43.220	Drosophila_melanogaster
ENSSHAG00000001026	POP7	100	86.620	ENSETEG00000007941	POP7	100	85.211	Echinops_telfairi
ENSSHAG00000001026	POP7	100	88.732	ENSEASG00005016994	POP7	100	87.324	Equus_asinus_asinus
ENSSHAG00000001026	POP7	100	88.732	ENSECAG00000010383	POP7	100	87.324	Equus_caballus
ENSSHAG00000001026	POP7	83	72.500	ENSELUG00000023947	pop7	88	72.500	Esox_lucius
ENSSHAG00000001026	POP7	100	88.732	ENSFCAG00000006849	POP7	100	87.324	Felis_catus
ENSSHAG00000001026	POP7	100	88.732	ENSFDAG00000018839	POP7	100	87.324	Fukomys_damarensis
ENSSHAG00000001026	POP7	94	72.059	ENSFHEG00000012595	pop7	85	72.593	Fundulus_heteroclitus
ENSSHAG00000001026	POP7	91	72.519	ENSGAFG00000017633	pop7	82	72.519	Gambusia_affinis
ENSSHAG00000001026	POP7	88	74.803	ENSGACG00000019931	pop7	79	74.803	Gasterosteus_aculeatus
ENSSHAG00000001026	POP7	100	88.028	ENSGGOG00000016492	POP7	100	86.620	Gorilla_gorilla
ENSSHAG00000001026	POP7	87	73.016	ENSHBUG00000011987	pop7	90	73.016	Haplochromis_burtoni
ENSSHAG00000001026	POP7	100	88.028	ENSHGLG00000018118	POP7	100	86.620	Heterocephalus_glaber_female
ENSSHAG00000001026	POP7	100	88.028	ENSHGLG00100007908	POP7	100	86.620	Heterocephalus_glaber_male
ENSSHAG00000001026	POP7	90	74.615	ENSHCOG00000010137	pop7	82	74.615	Hippocampus_comes
ENSSHAG00000001026	POP7	87	74.603	ENSIPUG00000000411	pop7	79	74.603	Ictalurus_punctatus
ENSSHAG00000001026	POP7	100	88.028	ENSSTOG00000030883	POP7	100	86.620	Ictidomys_tridecemlineatus
ENSSHAG00000001026	POP7	100	88.028	ENSJJAG00000003989	Pop7	100	87.324	Jaculus_jaculus
ENSSHAG00000001026	POP7	91	74.046	ENSKMAG00000010696	pop7	82	74.046	Kryptolebias_marmoratus
ENSSHAG00000001026	POP7	87	73.600	ENSLBEG00000008621	pop7	77	73.600	Labrus_bergylta
ENSSHAG00000001026	POP7	91	72.519	ENSLBEG00000003483	pop7	89	72.519	Labrus_bergylta
ENSSHAG00000001026	POP7	100	69.595	ENSLACG00000010203	POP7	88	74.809	Latimeria_chalumnae
ENSSHAG00000001026	POP7	92	75.000	ENSLOCG00000017553	pop7	84	77.273	Lepisosteus_oculatus
ENSSHAG00000001026	POP7	100	85.211	ENSLAFG00000030032	POP7	100	83.803	Loxodonta_africana
ENSSHAG00000001026	POP7	100	87.324	ENSMFAG00000027783	POP7	100	85.915	Macaca_fascicularis
ENSSHAG00000001026	POP7	100	87.324	ENSMMUG00000008581	POP7	100	85.915	Macaca_mulatta
ENSSHAG00000001026	POP7	100	87.324	ENSMNEG00000037495	POP7	100	85.915	Macaca_nemestrina
ENSSHAG00000001026	POP7	100	87.324	ENSMLEG00000027597	POP7	100	85.915	Mandrillus_leucophaeus
ENSSHAG00000001026	POP7	100	69.444	ENSMAMG00000007258	pop7	96	70.423	Mastacembelus_armatus
ENSSHAG00000001026	POP7	87	73.016	ENSMZEG00005005138	pop7	90	73.016	Maylandia_zebra
ENSSHAG00000001026	POP7	95	72.263	ENSMZEG00005022194	-	88	72.263	Maylandia_zebra
ENSSHAG00000001026	POP7	100	87.324	ENSMAUG00000015820	Pop7	100	85.915	Mesocricetus_auratus
ENSSHAG00000001026	POP7	100	88.732	ENSMICG00000009398	POP7	100	87.324	Microcebus_murinus
ENSSHAG00000001026	POP7	100	88.732	ENSMOCG00000013694	Pop7	100	87.324	Microtus_ochrogaster
ENSSHAG00000001026	POP7	91	74.046	ENSMMOG00000014095	pop7	90	74.046	Mola_mola
ENSSHAG00000001026	POP7	100	95.775	ENSMODG00000023662	POP7	100	95.775	Monodelphis_domestica
ENSSHAG00000001026	POP7	88	75.591	ENSMALG00000011180	pop7	92	76.190	Monopterus_albus
ENSSHAG00000001026	POP7	100	88.028	MGP_CAROLIEiJ_G0027876	Pop7	100	86.620	Mus_caroli
ENSSHAG00000001026	POP7	100	88.028	ENSMUSG00000029715	Pop7	100	86.620	Mus_musculus
ENSSHAG00000001026	POP7	100	89.437	MGP_PahariEiJ_G0024462	Pop7	100	88.028	Mus_pahari
ENSSHAG00000001026	POP7	100	88.028	MGP_SPRETEiJ_G0028881	Pop7	100	86.620	Mus_spretus
ENSSHAG00000001026	POP7	100	88.028	ENSMPUG00000019765	POP7	100	86.620	Mustela_putorius_furo
ENSSHAG00000001026	POP7	100	86.620	ENSMLUG00000010110	POP7	100	85.211	Myotis_lucifugus
ENSSHAG00000001026	POP7	100	87.324	ENSNGAG00000021630	Pop7	100	85.915	Nannospalax_galili
ENSSHAG00000001026	POP7	87	75.397	ENSNBRG00000006286	pop7	87	75.397	Neolamprologus_brichardi
ENSSHAG00000001026	POP7	100	88.028	ENSNLEG00000011939	POP7	100	86.620	Nomascus_leucogenys
ENSSHAG00000001026	POP7	53	90.667	ENSOPRG00000015185	POP7	100	90.667	Ochotona_princeps
ENSSHAG00000001026	POP7	100	89.437	ENSODEG00000020363	POP7	100	88.028	Octodon_degus
ENSSHAG00000001026	POP7	100	82.394	ENSOANG00000001658	POP7	100	82.394	Ornithorhynchus_anatinus
ENSSHAG00000001026	POP7	100	88.028	ENSOCUG00000007818	POP7	100	86.620	Oryctolagus_cuniculus
ENSSHAG00000001026	POP7	89	74.419	ENSORLG00000003594	pop7	88	74.419	Oryzias_latipes
ENSSHAG00000001026	POP7	94	73.333	ENSORLG00020017530	pop7	79	73.333	Oryzias_latipes_hni
ENSSHAG00000001026	POP7	94	72.593	ENSORLG00015015310	pop7	93	72.593	Oryzias_latipes_hsok
ENSSHAG00000001026	POP7	88	76.378	ENSOMEG00000003667	pop7	81	76.378	Oryzias_melastigma
ENSSHAG00000001026	POP7	100	88.028	ENSOGAG00000009340	POP7	100	86.620	Otolemur_garnettii
ENSSHAG00000001026	POP7	100	88.028	ENSPPAG00000015339	POP7	100	86.620	Pan_paniscus
ENSSHAG00000001026	POP7	100	88.732	ENSPPRG00000018408	POP7	100	87.324	Panthera_pardus
ENSSHAG00000001026	POP7	100	88.732	ENSPTIG00000005807	POP7	100	87.324	Panthera_tigris_altaica
ENSSHAG00000001026	POP7	100	88.028	ENSPTRG00000047460	-	100	86.620	Pan_troglodytes
ENSSHAG00000001026	POP7	100	88.028	ENSPTRG00000019504	POP7	100	86.620	Pan_troglodytes
ENSSHAG00000001026	POP7	100	87.324	ENSPANG00000006196	POP7	100	85.915	Papio_anubis
ENSSHAG00000001026	POP7	94	71.852	ENSPKIG00000019869	pop7	76	71.852	Paramormyrops_kingsleyae
ENSSHAG00000001026	POP7	75	71.296	ENSPSIG00000000415	POP7	92	69.841	Pelodiscus_sinensis
ENSSHAG00000001026	POP7	90	73.077	ENSPMGG00000011142	pop7	89	73.077	Periophthalmus_magnuspinnatus
ENSSHAG00000001026	POP7	100	88.732	ENSPEMG00000011583	Pop7	100	87.324	Peromyscus_maniculatus_bairdii
ENSSHAG00000001026	POP7	100	95.070	ENSPCIG00000000517	POP7	72	95.070	Phascolarctos_cinereus
ENSSHAG00000001026	POP7	91	72.519	ENSPFOG00000019976	pop7	82	72.519	Poecilia_formosa
ENSSHAG00000001026	POP7	91	72.519	ENSPLAG00000007700	pop7	82	72.519	Poecilia_latipinna
ENSSHAG00000001026	POP7	91	72.519	ENSPMEG00000010673	pop7	82	72.519	Poecilia_mexicana
ENSSHAG00000001026	POP7	91	72.519	ENSPREG00000015137	pop7	82	72.519	Poecilia_reticulata
ENSSHAG00000001026	POP7	100	88.028	ENSPPYG00000017426	POP7	100	86.620	Pongo_abelii
ENSSHAG00000001026	POP7	100	86.620	ENSPCAG00000010445	POP7	100	85.211	Procavia_capensis
ENSSHAG00000001026	POP7	100	88.732	ENSPCOG00000009302	POP7	100	87.324	Propithecus_coquereli
ENSSHAG00000001026	POP7	95	74.453	ENSPCOG00000018009	-	100	73.723	Propithecus_coquereli
ENSSHAG00000001026	POP7	87	73.016	ENSPNYG00000000975	pop7	90	73.016	Pundamilia_nyererei
ENSSHAG00000001026	POP7	87	75.397	ENSPNAG00000007206	pop7	91	73.134	Pygocentrus_nattereri
ENSSHAG00000001026	POP7	100	88.732	ENSRNOG00000025310	Pop7	100	87.324	Rattus_norvegicus
ENSSHAG00000001026	POP7	100	88.028	ENSRBIG00000002671	POP7	100	86.620	Rhinopithecus_bieti
ENSSHAG00000001026	POP7	100	88.732	ENSRROG00000028543	POP7	100	87.324	Rhinopithecus_roxellana
ENSSHAG00000001026	POP7	100	87.324	ENSSBOG00000005173	POP7	100	85.915	Saimiri_boliviensis_boliviensis
ENSSHAG00000001026	POP7	87	74.400	ENSSFOG00015007957	pop7	82	74.400	Scleropages_formosus
ENSSHAG00000001026	POP7	93	71.642	ENSSMAG00000015536	pop7	94	71.642	Scophthalmus_maximus
ENSSHAG00000001026	POP7	91	74.046	ENSSDUG00000022172	pop7	84	74.046	Seriola_dumerili
ENSSHAG00000001026	POP7	82	71.429	ENSSLDG00000019818	pop7	91	71.429	Seriola_lalandi_dorsalis
ENSSHAG00000001026	POP7	90	73.846	ENSSPAG00000000652	pop7	76	73.846	Stegastes_partitus
ENSSHAG00000001026	POP7	100	88.732	ENSSSCG00000007672	POP7	100	87.324	Sus_scrofa
ENSSHAG00000001026	POP7	92	73.485	ENSTRUG00000024340	-	91	74.046	Takifugu_rubripes
ENSSHAG00000001026	POP7	92	73.485	ENSTRUG00000023845	pop7	82	74.046	Takifugu_rubripes
ENSSHAG00000001026	POP7	91	73.282	ENSTNIG00000001259	pop7	82	73.282	Tetraodon_nigroviridis
ENSSHAG00000001026	POP7	100	88.732	ENSTBEG00000001849	POP7	100	87.324	Tupaia_belangeri
ENSSHAG00000001026	POP7	100	88.028	ENSTTRG00000011012	POP7	100	86.620	Tursiops_truncatus
ENSSHAG00000001026	POP7	100	88.028	ENSUAMG00000028076	POP7	100	86.620	Ursus_americanus
ENSSHAG00000001026	POP7	100	88.028	ENSUMAG00000010895	POP7	100	86.620	Ursus_maritimus
ENSSHAG00000001026	POP7	100	88.732	ENSVVUG00000023472	POP7	100	87.324	Vulpes_vulpes
ENSSHAG00000001026	POP7	86	74.194	ENSXCOG00000012016	pop7	81	70.992	Xiphophorus_couchianus
ENSSHAG00000001026	POP7	91	72.519	ENSXMAG00000019746	pop7	82	72.519	Xiphophorus_maculatus