EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000001216 (Gene tree)
Gene ID: 100914300
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 732 bases
Position: chrGL850968.1:8430-9161
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001365	RRM_1	PF00076.22	4.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001381	-	732	-	ENSSHAP00000001365	244 (aa)	-	G3VDW1

Gene Model

Click here to download ENSSHAG00000001216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000001216	-	100	94.262	ENSSHAG00000015558	-	100	94.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001216	-	99	77.869	ENSG00000184209	SNRNP35	94	80.519	Homo_sapiens
ENSSHAG00000001216	-	100	76.016	ENSAMEG00000019650	SNRNP35	99	77.236	Ailuropoda_melanoleuca
ENSSHAG00000001216	-	70	78.824	ENSACIG00000003238	snrnp35	87	76.087	Amphilophus_citrinellus
ENSSHAG00000001216	-	70	76.471	ENSAOCG00000007701	snrnp35	86	73.370	Amphiprion_ocellaris
ENSSHAG00000001216	-	70	76.471	ENSAPEG00000023725	snrnp35	80	76.471	Amphiprion_percula
ENSSHAG00000001216	-	70	78.824	ENSATEG00000021269	snrnp35	95	75.410	Anabas_testudineus
ENSSHAG00000001216	-	91	81.532	ENSAPLG00000015654	SNRNP35	89	81.818	Anas_platyrhynchos
ENSSHAG00000001216	-	89	79.545	ENSACAG00000015421	SNRNP35	86	78.414	Anolis_carolinensis
ENSSHAG00000001216	-	99	76.735	ENSANAG00000025109	SNRNP35	96	78.367	Aotus_nancymaae
ENSSHAG00000001216	-	79	72.021	ENSACLG00000020994	SNRNP35	98	71.292	Astatotilapia_calliptera
ENSSHAG00000001216	-	79	72.021	ENSACLG00000020890	snrnp35	98	71.292	Astatotilapia_calliptera
ENSSHAG00000001216	-	69	77.976	ENSAMXG00000026163	snrnp35	80	77.976	Astyanax_mexicanus
ENSSHAG00000001216	-	100	77.236	ENSBTAG00000008060	SNRNP35	100	78.455	Bos_taurus
ENSSHAG00000001216	-	99	77.459	ENSCJAG00000007131	SNRNP35	97	78.689	Callithrix_jacchus
ENSSHAG00000001216	-	100	76.423	ENSCAFG00000007484	SNRNP35	100	77.642	Canis_familiaris
ENSSHAG00000001216	-	100	76.423	ENSCAFG00020015272	-	100	77.642	Canis_lupus_dingo
ENSSHAG00000001216	-	100	77.236	ENSCHIG00000006364	SNRNP35	100	78.455	Capra_hircus
ENSSHAG00000001216	-	100	78.049	ENSTSYG00000034104	SNRNP35	99	79.268	Carlito_syrichta
ENSSHAG00000001216	-	100	75.610	ENSCPOG00000002548	SNRNP35	100	76.829	Cavia_porcellus
ENSSHAG00000001216	-	99	76.735	ENSCCAG00000001685	SNRNP35	97	78.367	Cebus_capucinus
ENSSHAG00000001216	-	99	77.869	ENSCATG00000021946	SNRNP35	94	80.087	Cercocebus_atys
ENSSHAG00000001216	-	100	74.797	ENSCLAG00000010232	SNRNP35	100	76.423	Chinchilla_lanigera
ENSSHAG00000001216	-	99	77.459	ENSCSAG00000018950	SNRNP35	94	80.087	Chlorocebus_sabaeus
ENSSHAG00000001216	-	100	79.268	ENSCHOG00000006263	SNRNP35	99	80.081	Choloepus_hoffmanni
ENSSHAG00000001216	-	97	81.092	ENSCPBG00000025965	SNRNP35	91	81.707	Chrysemys_picta_bellii
ENSSHAG00000001216	-	69	61.538	ENSCSAVG00000000748	-	94	61.538	Ciona_savignyi
ENSSHAG00000001216	-	99	77.869	ENSCANG00000025364	SNRNP35	92	80.519	Colobus_angolensis_palliatus
ENSSHAG00000001216	-	100	75.610	ENSCGRG00001012630	Snrnp35	100	77.236	Cricetulus_griseus_chok1gshd
ENSSHAG00000001216	-	100	75.610	ENSCGRG00000002063	Snrnp35	100	77.236	Cricetulus_griseus_crigri
ENSSHAG00000001216	-	68	77.711	ENSDARG00000099913	snrnp35	80	77.711	Danio_rerio
ENSSHAG00000001216	-	100	79.675	ENSDNOG00000038603	SNRNP35	100	80.488	Dasypus_novemcinctus
ENSSHAG00000001216	-	100	76.423	ENSDORG00000001859	Snrnp35	100	77.642	Dipodomys_ordii
ENSSHAG00000001216	-	69	61.905	ENSEBUG00000003535	snrnp35	72	57.216	Eptatretus_burgeri
ENSSHAG00000001216	-	99	77.049	ENSEASG00005012617	SNRNP35	94	80.087	Equus_asinus_asinus
ENSSHAG00000001216	-	99	77.049	ENSECAG00000006080	SNRNP35	94	80.087	Equus_caballus
ENSSHAG00000001216	-	74	86.111	ENSEEUG00000011544	SNRNP35	80	83.249	Erinaceus_europaeus
ENSSHAG00000001216	-	75	75.824	ENSELUG00000000071	snrnp35	76	75.824	Esox_lucius
ENSSHAG00000001216	-	100	77.236	ENSFCAG00000001159	SNRNP35	98	78.455	Felis_catus
ENSSHAG00000001216	-	100	80.328	ENSFALG00000014650	SNRNP35	93	80.531	Ficedula_albicollis
ENSSHAG00000001216	-	100	66.667	ENSFDAG00000018743	SNRNP35	100	68.293	Fukomys_damarensis
ENSSHAG00000001216	-	96	62.712	ENSGMOG00000002299	snrnp35	96	63.755	Gadus_morhua
ENSSHAG00000001216	-	97	78.814	ENSGALG00000003318	SNRNP35	85	80.269	Gallus_gallus
ENSSHAG00000001216	-	70	78.824	ENSGACG00000020631	snrnp35	96	67.686	Gasterosteus_aculeatus
ENSSHAG00000001216	-	99	78.279	ENSGGOG00000015936	SNRNP35	92	80.952	Gorilla_gorilla
ENSSHAG00000001216	-	85	69.524	ENSHBUG00000015853	snrnp35	95	71.014	Haplochromis_burtoni
ENSSHAG00000001216	-	100	75.203	ENSHGLG00000017961	SNRNP35	94	78.788	Heterocephalus_glaber_female
ENSSHAG00000001216	-	100	75.203	ENSHGLG00100019252	SNRNP35	94	78.788	Heterocephalus_glaber_male
ENSSHAG00000001216	-	69	76.331	ENSIPUG00000016053	snrnp35	80	63.596	Ictalurus_punctatus
ENSSHAG00000001216	-	100	75.203	ENSSTOG00000025145	SNRNP35	93	77.193	Ictidomys_tridecemlineatus
ENSSHAG00000001216	-	100	77.236	ENSJJAG00000013421	Snrnp35	91	79.221	Jaculus_jaculus
ENSSHAG00000001216	-	100	71.020	ENSLACG00000017176	SNRNP35	81	72.247	Latimeria_chalumnae
ENSSHAG00000001216	-	69	79.290	ENSLOCG00000018154	snrnp35	84	67.982	Lepisosteus_oculatus
ENSSHAG00000001216	-	100	78.455	ENSLAFG00000022302	SNRNP35	100	80.081	Loxodonta_africana
ENSSHAG00000001216	-	99	77.459	ENSMFAG00000008986	SNRNP35	94	80.087	Macaca_fascicularis
ENSSHAG00000001216	-	99	77.459	ENSMMUG00000008411	SNRNP35	94	80.087	Macaca_mulatta
ENSSHAG00000001216	-	99	77.459	ENSMNEG00000018139	SNRNP35	94	80.087	Macaca_nemestrina
ENSSHAG00000001216	-	99	77.869	ENSMLEG00000040998	SNRNP35	92	80.087	Mandrillus_leucophaeus
ENSSHAG00000001216	-	69	78.571	ENSMAMG00000018927	snrnp35	94	66.667	Mastacembelus_armatus
ENSSHAG00000001216	-	79	72.021	ENSMZEG00005018928	snrnp35	98	71.292	Maylandia_zebra
ENSSHAG00000001216	-	68	72.727	ENSMZEG00005018947	-	94	67.000	Maylandia_zebra
ENSSHAG00000001216	-	100	79.098	ENSMGAG00000003241	SNRNP35	100	79.098	Meleagris_gallopavo
ENSSHAG00000001216	-	100	76.423	ENSMAUG00000001690	Snrnp35	100	78.049	Mesocricetus_auratus
ENSSHAG00000001216	-	100	77.642	ENSMICG00000026512	SNRNP35	98	78.862	Microcebus_murinus
ENSSHAG00000001216	-	100	75.203	ENSMOCG00000000548	Snrnp35	100	76.829	Microtus_ochrogaster
ENSSHAG00000001216	-	70	78.235	ENSMMOG00000018779	snrnp35	94	68.636	Mola_mola
ENSSHAG00000001216	-	73	96.648	ENSMODG00000012481	SNRNP35	100	96.648	Monodelphis_domestica
ENSSHAG00000001216	-	100	74.797	MGP_CAROLIEiJ_G0027752	Snrnp35	100	84.298	Mus_caroli
ENSSHAG00000001216	-	100	74.797	ENSMUSG00000029402	Snrnp35	100	84.298	Mus_musculus
ENSSHAG00000001216	-	91	77.232	MGP_PahariEiJ_G0024332	Snrnp35	100	84.298	Mus_pahari
ENSSHAG00000001216	-	100	74.797	MGP_SPRETEiJ_G0028751	Snrnp35	100	84.298	Mus_spretus
ENSSHAG00000001216	-	100	75.610	ENSMPUG00000019392	SNRNP35	100	76.829	Mustela_putorius_furo
ENSSHAG00000001216	-	100	76.829	ENSMLUG00000025311	SNRNP35	100	78.049	Myotis_lucifugus
ENSSHAG00000001216	-	100	75.806	ENSNGAG00000010711	Snrnp35	94	77.682	Nannospalax_galili
ENSSHAG00000001216	-	99	77.869	ENSNLEG00000029859	SNRNP35	92	80.519	Nomascus_leucogenys
ENSSHAG00000001216	-	100	79.098	ENSOPRG00000011119	SNRNP35	93	81.659	Ochotona_princeps
ENSSHAG00000001216	-	100	76.016	ENSODEG00000019870	SNRNP35	100	77.236	Octodon_degus
ENSSHAG00000001216	-	70	78.824	ENSONIG00000021361	snrnp35	99	63.786	Oreochromis_niloticus
ENSSHAG00000001216	-	96	81.070	ENSOANG00000002697	SNRNP35	97	82.627	Ornithorhynchus_anatinus
ENSSHAG00000001216	-	100	76.016	ENSOCUG00000021248	SNRNP35	94	78.788	Oryctolagus_cuniculus
ENSSHAG00000001216	-	81	70.707	ENSORLG00000005673	snrnp35	88	70.707	Oryzias_latipes
ENSSHAG00000001216	-	87	68.545	ENSORLG00015014439	snrnp35	96	68.545	Oryzias_latipes_hsok
ENSSHAG00000001216	-	100	77.642	ENSOGAG00000011301	SNRNP35	100	78.862	Otolemur_garnettii
ENSSHAG00000001216	-	100	77.236	ENSOARG00000004583	SNRNP35	100	78.455	Ovis_aries
ENSSHAG00000001216	-	99	78.279	ENSPPAG00000000480	SNRNP35	92	80.952	Pan_paniscus
ENSSHAG00000001216	-	100	77.642	ENSPPRG00000013139	SNRNP35	98	78.862	Panthera_pardus
ENSSHAG00000001216	-	100	77.642	ENSPTIG00000015832	SNRNP35	98	78.862	Panthera_tigris_altaica
ENSSHAG00000001216	-	99	78.279	ENSPTRG00000023573	SNRNP35	92	80.952	Pan_troglodytes
ENSSHAG00000001216	-	99	77.869	ENSPANG00000019739	SNRNP35	92	80.087	Papio_anubis
ENSSHAG00000001216	-	69	76.923	ENSPKIG00000005221	snrnp35	81	76.923	Paramormyrops_kingsleyae
ENSSHAG00000001216	-	100	80.488	ENSPSIG00000000450	SNRNP35	91	80.488	Pelodiscus_sinensis
ENSSHAG00000001216	-	90	94.977	ENSPCIG00000010978	SNRNP35	93	93.852	Phascolarctos_cinereus
ENSSHAG00000001216	-	76	73.514	ENSPFOG00000019881	snrnp35	83	73.514	Poecilia_formosa
ENSSHAG00000001216	-	99	77.869	ENSPPYG00000005088	SNRNP35	92	80.519	Pongo_abelii
ENSSHAG00000001216	-	100	77.049	ENSPCAG00000011478	SNRNP35	93	79.386	Procavia_capensis
ENSSHAG00000001216	-	100	77.236	ENSPCOG00000009946	SNRNP35	99	78.455	Propithecus_coquereli
ENSSHAG00000001216	-	100	77.236	ENSPVAG00000015317	SNRNP35	99	77.642	Pteropus_vampyrus
ENSSHAG00000001216	-	95	63.983	ENSPNAG00000020589	snrnp35	87	64.502	Pygocentrus_nattereri
ENSSHAG00000001216	-	100	74.390	ENSRNOG00000001060	Snrnp35	100	76.016	Rattus_norvegicus
ENSSHAG00000001216	-	99	77.459	ENSRBIG00000043111	SNRNP35	92	80.087	Rhinopithecus_bieti
ENSSHAG00000001216	-	99	77.459	ENSRROG00000032878	SNRNP35	92	80.087	Rhinopithecus_roxellana
ENSSHAG00000001216	-	99	76.735	ENSSBOG00000012231	SNRNP35	97	78.367	Saimiri_boliviensis_boliviensis
ENSSHAG00000001216	-	69	78.698	ENSSFOG00015003785	snrnp35	97	72.727	Scleropages_formosus
ENSSHAG00000001216	-	77	74.468	ENSSLDG00000017209	snrnp35	98	69.378	Seriola_lalandi_dorsalis
ENSSHAG00000001216	-	100	73.361	ENSSARG00000012656	SNRNP35	88	80.184	Sorex_araneus
ENSSHAG00000001216	-	96	78.814	ENSSPUG00000012768	SNRNP35	93	79.675	Sphenodon_punctatus
ENSSHAG00000001216	-	89	67.130	ENSSPAG00000008207	snrnp35	98	65.766	Stegastes_partitus
ENSSHAG00000001216	-	100	76.423	ENSSSCG00000022212	SNRNP35	99	82.075	Sus_scrofa
ENSSHAG00000001216	-	97	80.508	ENSTGUG00000015471	-	91	80.738	Taeniopygia_guttata
ENSSHAG00000001216	-	100	79.918	ENSTGUG00000005364	-	93	81.166	Taeniopygia_guttata
ENSSHAG00000001216	-	69	78.571	ENSTNIG00000009984	snrnp35	92	71.574	Tetraodon_nigroviridis
ENSSHAG00000001216	-	100	77.642	ENSTBEG00000002309	SNRNP35	99	79.268	Tupaia_belangeri
ENSSHAG00000001216	-	100	76.423	ENSUAMG00000012611	SNRNP35	100	77.642	Ursus_americanus
ENSSHAG00000001216	-	100	76.423	ENSUMAG00000003914	SNRNP35	97	77.642	Ursus_maritimus
ENSSHAG00000001216	-	100	76.423	ENSVVUG00000027761	-	100	77.642	Vulpes_vulpes
ENSSHAG00000001216	-	76	73.514	ENSXMAG00000019885	snrnp35	74	73.514	Xiphophorus_maculatus