EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000001265 (Gene tree)
Gene ID: 100923209
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 5519 bases
Position: chrGL867908.1:8999-14517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001419	NTF2	PF02136.20	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001435	-	2026	-	ENSSHAP00000001419	90 (aa)	-	G3VE15

Gene Model

Click here to download ENSSHAG00000001265's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG
shr03013	RNA transport	KEGG
shr03015	mRNA surveillance pathway	KEGG
shr05164	Influenza A	KEGG

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000001265	-	93	71.429	ENSSHAG00000010539	-	59	71.429
ENSSHAG00000001265	-	88	81.013	ENSSHAG00000002955	-	55	81.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001265	-	93	72.619	ENSG00000101888	NXT2	59	72.619	Homo_sapiens
ENSSHAG00000001265	-	91	68.293	ENSAPOG00000010308	nxt2	57	68.293	Acanthochromis_polyacanthus
ENSSHAG00000001265	-	91	65.854	ENSACIG00000015026	nxt2	57	65.854	Amphilophus_citrinellus
ENSSHAG00000001265	-	91	68.293	ENSAOCG00000007411	nxt2	57	68.293	Amphiprion_ocellaris
ENSSHAG00000001265	-	91	68.293	ENSAPEG00000010454	nxt2	57	68.293	Amphiprion_percula
ENSSHAG00000001265	-	91	68.293	ENSATEG00000020315	nxt2	57	68.293	Anabas_testudineus
ENSSHAG00000001265	-	93	67.857	ENSACAG00000012649	NXT2	58	67.857	Anolis_carolinensis
ENSSHAG00000001265	-	93	67.857	ENSANAG00000038165	NXT2	56	68.354	Aotus_nancymaae
ENSSHAG00000001265	-	91	67.073	ENSACLG00000025072	nxt2	57	67.073	Astatotilapia_calliptera
ENSSHAG00000001265	-	97	62.500	ENSAMXG00000031355	nxt2	62	62.500	Astyanax_mexicanus
ENSSHAG00000001265	-	93	70.238	ENSBTAG00000020739	NXT2	59	70.238	Bos_taurus
ENSSHAG00000001265	-	93	71.429	ENSCAFG00020005721	NXT2	59	71.429	Canis_lupus_dingo
ENSSHAG00000001265	-	93	70.238	ENSCHIG00000000279	NXT2	59	70.238	Capra_hircus
ENSSHAG00000001265	-	93	72.619	ENSTSYG00000001924	NXT2	59	72.619	Carlito_syrichta
ENSSHAG00000001265	-	93	69.048	ENSCPBG00000000629	NXT2	60	69.048	Chrysemys_picta_bellii
ENSSHAG00000001265	-	93	67.857	ENSCSEG00000018710	nxt2	74	67.857	Cynoglossus_semilaevis
ENSSHAG00000001265	-	97	67.045	ENSCVAG00000021187	nxt2	62	67.045	Cyprinodon_variegatus
ENSSHAG00000001265	-	97	61.364	ENSDARG00000061527	nxt2	64	61.364	Danio_rerio
ENSSHAG00000001265	-	93	71.429	ENSDNOG00000039271	NXT2	59	71.429	Dasypus_novemcinctus
ENSSHAG00000001265	-	88	67.089	ENSDORG00000013227	-	56	67.089	Dipodomys_ordii
ENSSHAG00000001265	-	86	70.130	ENSDORG00000010714	Nxt2	55	70.130	Dipodomys_ordii
ENSSHAG00000001265	-	93	70.238	ENSEASG00005019567	NXT2	59	70.238	Equus_asinus_asinus
ENSSHAG00000001265	-	87	70.513	ENSEEUG00000005675	-	60	70.513	Erinaceus_europaeus
ENSSHAG00000001265	-	91	63.415	ENSELUG00000005141	NXT2	57	63.415	Esox_lucius
ENSSHAG00000001265	-	93	72.619	ENSFALG00000000178	NXT2	60	72.619	Ficedula_albicollis
ENSSHAG00000001265	-	97	65.909	ENSFHEG00000001982	nxt2	62	65.909	Fundulus_heteroclitus
ENSSHAG00000001265	-	91	68.293	ENSGMOG00000003163	nxt2	57	68.293	Gadus_morhua
ENSSHAG00000001265	-	93	72.619	ENSGALG00000008092	NXT2	60	72.619	Gallus_gallus
ENSSHAG00000001265	-	91	68.293	ENSGAFG00000002714	nxt2	57	68.293	Gambusia_affinis
ENSSHAG00000001265	-	91	63.415	ENSGACG00000018508	nxt2	57	63.415	Gasterosteus_aculeatus
ENSSHAG00000001265	-	93	67.857	ENSGAGG00000017047	NXT2	60	67.857	Gopherus_agassizii
ENSSHAG00000001265	-	93	72.619	ENSGGOG00000013593	NXT2	57	72.500	Gorilla_gorilla
ENSSHAG00000001265	-	91	67.073	ENSHBUG00000002974	nxt2	57	67.073	Haplochromis_burtoni
ENSSHAG00000001265	-	93	66.667	ENSHGLG00000001921	NXT2	59	66.667	Heterocephalus_glaber_female
ENSSHAG00000001265	-	93	66.667	ENSHGLG00100002378	NXT2	59	66.667	Heterocephalus_glaber_male
ENSSHAG00000001265	-	93	65.476	ENSHCOG00000003893	nxt2	59	65.476	Hippocampus_comes
ENSSHAG00000001265	-	97	64.773	ENSIPUG00000000517	nxt2	62	64.773	Ictalurus_punctatus
ENSSHAG00000001265	-	88	73.418	ENSSTOG00000005243	NXT2	56	73.418	Ictidomys_tridecemlineatus
ENSSHAG00000001265	-	88	60.759	ENSJJAG00000023288	-	53	60.759	Jaculus_jaculus
ENSSHAG00000001265	-	93	59.524	ENSJJAG00000000326	-	61	59.524	Jaculus_jaculus
ENSSHAG00000001265	-	91	64.634	ENSKMAG00000016615	nxt2	57	64.634	Kryptolebias_marmoratus
ENSSHAG00000001265	-	91	65.060	ENSLBEG00000014298	nxt2	56	65.000	Labrus_bergylta
ENSSHAG00000001265	-	97	70.000	ENSLACG00000004286	NXT2	63	70.000	Latimeria_chalumnae
ENSSHAG00000001265	-	91	67.073	ENSLOCG00000014519	nxt2	57	67.073	Lepisosteus_oculatus
ENSSHAG00000001265	-	93	72.619	ENSLAFG00000007116	NXT2	51	72.619	Loxodonta_africana
ENSSHAG00000001265	-	93	72.619	ENSMMUG00000013204	NXT2	59	71.429	Macaca_mulatta
ENSSHAG00000001265	-	93	72.619	ENSMNEG00000010392	NXT2	59	72.619	Macaca_nemestrina
ENSSHAG00000001265	-	96	66.667	ENSMAMG00000013603	nxt2	56	66.667	Mastacembelus_armatus
ENSSHAG00000001265	-	91	67.073	ENSMZEG00005007590	nxt2	57	67.073	Maylandia_zebra
ENSSHAG00000001265	-	91	71.951	ENSMGAG00000006597	NXT2	59	71.951	Meleagris_gallopavo
ENSSHAG00000001265	-	93	70.238	ENSMAUG00000000496	Nxt2	59	70.238	Mesocricetus_auratus
ENSSHAG00000001265	-	89	70.000	ENSMICG00000017900	-	57	70.000	Microcebus_murinus
ENSSHAG00000001265	-	93	63.095	ENSMICG00000014848	-	52	63.095	Microcebus_murinus
ENSSHAG00000001265	-	93	64.286	ENSMOCG00000007176	Nxt2	59	64.286	Microtus_ochrogaster
ENSSHAG00000001265	-	93	84.524	ENSMODG00000011492	-	59	84.524	Monodelphis_domestica
ENSSHAG00000001265	-	88	77.215	ENSMODG00000021343	-	58	77.215	Monodelphis_domestica
ENSSHAG00000001265	-	91	68.293	ENSMALG00000006390	nxt2	56	69.620	Monopterus_albus
ENSSHAG00000001265	-	93	70.238	MGP_CAROLIEiJ_G0033463	Nxt2	59	70.238	Mus_caroli
ENSSHAG00000001265	-	93	70.238	ENSMUSG00000042271	Nxt2	59	70.238	Mus_musculus
ENSSHAG00000001265	-	93	71.429	MGP_PahariEiJ_G0032003	Nxt2	59	71.429	Mus_pahari
ENSSHAG00000001265	-	93	70.238	MGP_SPRETEiJ_G0034634	Nxt2	59	70.238	Mus_spretus
ENSSHAG00000001265	-	93	65.476	ENSNGAG00000015935	Nxt2	59	65.476	Nannospalax_galili
ENSSHAG00000001265	-	91	67.073	ENSNBRG00000019401	nxt2	57	67.073	Neolamprologus_brichardi
ENSSHAG00000001265	-	93	73.810	ENSNLEG00000014331	NXT2	59	71.429	Nomascus_leucogenys
ENSSHAG00000001265	-	88	81.013	ENSMEUG00000000393	-	58	81.013	Notamacropus_eugenii
ENSSHAG00000001265	-	93	70.238	ENSMEUG00000001278	-	60	70.238	Notamacropus_eugenii
ENSSHAG00000001265	-	93	72.619	ENSODEG00000012049	NXT2	59	72.619	Octodon_degus
ENSSHAG00000001265	-	91	67.073	ENSONIG00000017566	nxt2	57	67.073	Oreochromis_niloticus
ENSSHAG00000001265	-	91	71.951	ENSOANG00000011441	NXT2	54	71.951	Ornithorhynchus_anatinus
ENSSHAG00000001265	-	97	61.364	ENSORLG00000022600	nxt2	62	61.364	Oryzias_latipes
ENSSHAG00000001265	-	97	61.364	ENSORLG00020004703	nxt2	62	61.364	Oryzias_latipes_hni
ENSSHAG00000001265	-	97	61.364	ENSORLG00015008149	nxt2	62	61.364	Oryzias_latipes_hsok
ENSSHAG00000001265	-	97	63.636	ENSOMEG00000013420	nxt2	62	63.636	Oryzias_melastigma
ENSSHAG00000001265	-	93	69.048	ENSOARG00000015625	-	52	69.048	Ovis_aries
ENSSHAG00000001265	-	93	70.238	ENSOARG00000018574	-	52	70.238	Ovis_aries
ENSSHAG00000001265	-	93	72.619	ENSPPAG00000030159	NXT2	57	72.500	Pan_paniscus
ENSSHAG00000001265	-	93	70.238	ENSPPRG00000024610	NXT2	59	70.238	Panthera_pardus
ENSSHAG00000001265	-	88	72.152	ENSPTIG00000013174	NXT2	54	72.152	Panthera_tigris_altaica
ENSSHAG00000001265	-	93	72.619	ENSPTRG00000039310	NXT2	57	72.500	Pan_troglodytes
ENSSHAG00000001265	-	93	71.429	ENSPANG00000018449	NXT2	59	71.429	Papio_anubis
ENSSHAG00000001265	-	97	63.636	ENSPKIG00000022011	nxt2	62	63.636	Paramormyrops_kingsleyae
ENSSHAG00000001265	-	97	62.500	ENSPMGG00000000629	nxt2	62	62.500	Periophthalmus_magnuspinnatus
ENSSHAG00000001265	-	86	84.416	ENSPCIG00000008562	-	50	84.416	Phascolarctos_cinereus
ENSSHAG00000001265	-	91	69.512	ENSPFOG00000007462	nxt2	57	69.512	Poecilia_formosa
ENSSHAG00000001265	-	97	65.909	ENSPLAG00000002080	nxt2	57	69.512	Poecilia_latipinna
ENSSHAG00000001265	-	91	69.512	ENSPMEG00000008382	nxt2	56	70.513	Poecilia_mexicana
ENSSHAG00000001265	-	93	73.810	ENSPPYG00000020625	-	59	73.810	Pongo_abelii
ENSSHAG00000001265	-	93	72.619	ENSPCOG00000024004	NXT2	59	72.619	Propithecus_coquereli
ENSSHAG00000001265	-	91	67.073	ENSPNYG00000024009	nxt2	57	67.073	Pundamilia_nyererei
ENSSHAG00000001265	-	97	64.773	ENSPNAG00000025785	nxt2	62	64.773	Pygocentrus_nattereri
ENSSHAG00000001265	-	98	67.045	ENSRNOG00000019168	Nxt2	51	67.045	Rattus_norvegicus
ENSSHAG00000001265	-	93	72.619	ENSRROG00000036216	NXT2	59	72.619	Rhinopithecus_roxellana
ENSSHAG00000001265	-	93	70.238	ENSSBOG00000029386	NXT2	56	70.886	Saimiri_boliviensis_boliviensis
ENSSHAG00000001265	-	91	65.854	ENSSFOG00015009870	nxt2	57	65.854	Scleropages_formosus
ENSSHAG00000001265	-	93	61.905	ENSSMAG00000010366	nxt2	59	61.905	Scophthalmus_maximus
ENSSHAG00000001265	-	86	67.532	ENSSLDG00000002946	-	54	67.532	Seriola_lalandi_dorsalis
ENSSHAG00000001265	-	87	67.949	ENSSLDG00000024416	nxt2	56	67.949	Seriola_lalandi_dorsalis
ENSSHAG00000001265	-	87	67.949	ENSSLDG00000001314	nxt2	56	67.949	Seriola_lalandi_dorsalis
ENSSHAG00000001265	-	97	67.045	ENSSPUG00000000372	NXT2	62	67.045	Sphenodon_punctatus
ENSSHAG00000001265	-	91	67.073	ENSSPAG00000015263	nxt2	57	67.073	Stegastes_partitus
ENSSHAG00000001265	-	93	71.429	ENSSSCG00000012581	NXT2	59	71.429	Sus_scrofa
ENSSHAG00000001265	-	97	69.318	ENSTGUG00000004286	NXT2	62	69.318	Taeniopygia_guttata
ENSSHAG00000001265	-	93	63.095	ENSTRUG00000004111	nxt2	59	63.095	Takifugu_rubripes
ENSSHAG00000001265	-	86	68.831	ENSTNIG00000015787	nxt2	55	68.831	Tetraodon_nigroviridis
ENSSHAG00000001265	-	90	72.840	ENSUAMG00000027383	NXT2	58	72.840	Ursus_americanus
ENSSHAG00000001265	-	90	72.840	ENSUMAG00000023095	NXT2	58	72.840	Ursus_maritimus
ENSSHAG00000001265	-	93	71.429	ENSVVUG00000010575	NXT2	59	70.238	Vulpes_vulpes
ENSSHAG00000001265	-	93	67.059	ENSXETG00000008528	nxt2	61	67.059	Xenopus_tropicalis
ENSSHAG00000001265	-	87	70.513	ENSXCOG00000011172	nxt2	56	70.513	Xiphophorus_couchianus
ENSSHAG00000001265	-	91	69.512	ENSXMAG00000022277	nxt2	57	69.512	Xiphophorus_maculatus