EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000001266 (Gene tree)
Gene ID: 100916768
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 49772 bases
Position: chrGL867711.1:9003-58774
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001421	MMR_HSR1	PF01926.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001436	-	2068	-	ENSSHAP00000001420	350 (aa)	-	G3VE16
ENSSHAT00000001437	-	1978	-	ENSSHAP00000001421	340 (aa)	-	G3VE17

Gene Model

Click here to download ENSSHAG00000001266's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr04140	Autophagy - animal	KEGG
shr04150	mTOR signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001266	-	94	96.262	ENSG00000083750	RRAGB	100	98.969	Homo_sapiens
ENSSHAG00000001266	-	92	99.681	ENSG00000155876	RRAGA	100	99.681	Homo_sapiens
ENSSHAG00000001266	-	92	96.486	ENSAPOG00000012140	rraga	99	96.486	Acanthochromis_polyacanthus
ENSSHAG00000001266	-	92	96.166	ENSACIG00000013561	rraga	99	96.166	Amphilophus_citrinellus
ENSSHAG00000001266	-	92	96.486	ENSAOCG00000002304	rraga	99	96.486	Amphiprion_ocellaris
ENSSHAG00000001266	-	92	96.486	ENSAPEG00000006571	rraga	99	96.486	Amphiprion_percula
ENSSHAG00000001266	-	92	96.486	ENSATEG00000011885	rraga	99	96.486	Anabas_testudineus
ENSSHAG00000001266	-	94	96.262	ENSANAG00000020912	RRAGB	93	96.262	Aotus_nancymaae
ENSSHAG00000001266	-	92	98.722	ENSANAG00000031746	-	100	98.722	Aotus_nancymaae
ENSSHAG00000001266	-	92	96.805	ENSACLG00000010458	rraga	99	96.805	Astatotilapia_calliptera
ENSSHAG00000001266	-	92	96.166	ENSAMXG00000030179	rraga	99	96.166	Astyanax_mexicanus
ENSSHAG00000001266	-	92	99.042	ENSBTAG00000038064	-	100	99.042	Bos_taurus
ENSSHAG00000001266	-	94	96.262	ENSBTAG00000012980	RRAGB	99	98.355	Bos_taurus
ENSSHAG00000001266	-	92	99.681	ENSBTAG00000033543	RRAGA	100	99.681	Bos_taurus
ENSSHAG00000001266	-	87	64.706	WBGene00006414	raga-1	98	64.706	Caenorhabditis_elegans
ENSSHAG00000001266	-	96	97.538	ENSCJAG00000022413	-	98	98.148	Callithrix_jacchus
ENSSHAG00000001266	-	92	98.403	ENSCJAG00000001550	-	100	98.403	Callithrix_jacchus
ENSSHAG00000001266	-	94	95.950	ENSCJAG00000007317	RRAGB	93	95.950	Callithrix_jacchus
ENSSHAG00000001266	-	92	99.681	ENSCAFG00020012925	RRAGA	100	99.681	Canis_lupus_dingo
ENSSHAG00000001266	-	94	96.562	ENSCAFG00020013782	RRAGB	92	96.562	Canis_lupus_dingo
ENSSHAG00000001266	-	92	99.681	ENSCHIG00000004994	RRAGA	100	99.681	Capra_hircus
ENSSHAG00000001266	-	94	95.950	ENSCHIG00000018786	RRAGB	100	96.166	Capra_hircus
ENSSHAG00000001266	-	94	96.262	ENSTSYG00000004397	RRAGB	93	96.262	Carlito_syrichta
ENSSHAG00000001266	-	89	96.040	ENSCPOG00000011266	RRAGB	99	96.040	Cavia_porcellus
ENSSHAG00000001266	-	92	99.681	ENSCPOG00000008047	RRAGA	100	99.681	Cavia_porcellus
ENSSHAG00000001266	-	94	96.250	ENSCCAG00000026742	RRAGB	92	96.250	Cebus_capucinus
ENSSHAG00000001266	-	92	99.681	ENSCCAG00000000619	-	100	99.681	Cebus_capucinus
ENSSHAG00000001266	-	92	99.681	ENSCATG00000015913	RRAGA	100	99.681	Cercocebus_atys
ENSSHAG00000001266	-	94	94.393	ENSCLAG00000003913	RRAGB	93	94.393	Chinchilla_lanigera
ENSSHAG00000001266	-	92	98.722	ENSCLAG00000017884	RRAGA	100	98.722	Chinchilla_lanigera
ENSSHAG00000001266	-	92	99.681	ENSCHOG00000001957	RRAGA	100	99.681	Choloepus_hoffmanni
ENSSHAG00000001266	-	92	99.361	ENSCPBG00000010507	RRAGB	100	99.361	Chrysemys_picta_bellii
ENSSHAG00000001266	-	88	83.278	ENSCING00000007876	-	95	83.278	Ciona_intestinalis
ENSSHAG00000001266	-	88	82.943	ENSCSAVG00000003505	-	96	82.943	Ciona_savignyi
ENSSHAG00000001266	-	94	96.262	ENSCANG00000017510	RRAGB	93	96.262	Colobus_angolensis_palliatus
ENSSHAG00000001266	-	92	99.681	ENSCANG00000038134	RRAGA	100	99.681	Colobus_angolensis_palliatus
ENSSHAG00000001266	-	94	95.016	ENSCGRG00001013394	Rragb	99	97.697	Cricetulus_griseus_chok1gshd
ENSSHAG00000001266	-	89	97.697	ENSCGRG00000006827	Rragb	99	97.697	Cricetulus_griseus_crigri
ENSSHAG00000001266	-	88	100.000	ENSCGRG00000003443	Rraga	96	100.000	Cricetulus_griseus_crigri
ENSSHAG00000001266	-	92	96.486	ENSCSEG00000014142	rraga	99	96.486	Cynoglossus_semilaevis
ENSSHAG00000001266	-	92	96.166	ENSCVAG00000021719	rraga	99	96.166	Cyprinodon_variegatus
ENSSHAG00000001266	-	92	99.681	ENSDNOG00000015581	RRAGA	100	99.681	Dasypus_novemcinctus
ENSSHAG00000001266	-	90	97.720	ENSDORG00000015932	Rragb	95	97.720	Dipodomys_ordii
ENSSHAG00000001266	-	92	99.681	ENSDORG00000015994	Rraga	100	99.681	Dipodomys_ordii
ENSSHAG00000001266	-	87	80.743	FBgn0037647	RagA-B	95	80.743	Drosophila_melanogaster
ENSSHAG00000001266	-	89	90.132	ENSEBUG00000008941	rraga	87	88.959	Eptatretus_burgeri
ENSSHAG00000001266	-	96	96.933	ENSEASG00005019266	RRAGA	94	96.933	Equus_asinus_asinus
ENSSHAG00000001266	-	84	97.895	ENSEASG00005006973	RRAGB	83	97.895	Equus_asinus_asinus
ENSSHAG00000001266	-	94	96.262	ENSECAG00000006020	RRAGB	93	96.262	Equus_caballus
ENSSHAG00000001266	-	96	96.933	ENSECAG00000005729	RRAGA	94	96.933	Equus_caballus
ENSSHAG00000001266	-	92	99.681	ENSEEUG00000009466	RRAGA	100	99.681	Erinaceus_europaeus
ENSSHAG00000001266	-	92	96.805	ENSELUG00000009655	rraga	99	96.805	Esox_lucius
ENSSHAG00000001266	-	92	99.681	ENSFCAG00000022742	RRAGA	100	99.681	Felis_catus
ENSSHAG00000001266	-	94	95.950	ENSFCAG00000013932	RRAGB	93	95.950	Felis_catus
ENSSHAG00000001266	-	93	98.734	ENSFALG00000011263	RRAGB	86	98.734	Ficedula_albicollis
ENSSHAG00000001266	-	90	98.033	ENSFDAG00000018157	RRAGB	99	98.033	Fukomys_damarensis
ENSSHAG00000001266	-	92	96.486	ENSFHEG00000002145	rraga	99	96.486	Fundulus_heteroclitus
ENSSHAG00000001266	-	92	95.860	ENSGMOG00000004849	rraga	99	95.860	Gadus_morhua
ENSSHAG00000001266	-	92	99.361	ENSGALG00000041226	RRAGB	100	99.361	Gallus_gallus
ENSSHAG00000001266	-	91	96.463	ENSGAFG00000006618	rraga	99	96.463	Gambusia_affinis
ENSSHAG00000001266	-	92	95.556	ENSGACG00000020342	rraga	99	95.556	Gasterosteus_aculeatus
ENSSHAG00000001266	-	92	99.361	ENSGAGG00000012251	RRAGB	100	99.361	Gopherus_agassizii
ENSSHAG00000001266	-	94	96.262	ENSGGOG00000011501	RRAGB	93	96.262	Gorilla_gorilla
ENSSHAG00000001266	-	92	99.681	ENSGGOG00000021937	RRAGA	100	99.681	Gorilla_gorilla
ENSSHAG00000001266	-	89	92.384	ENSHBUG00000004494	rraga	92	92.384	Haplochromis_burtoni
ENSSHAG00000001266	-	94	95.639	ENSHGLG00000000313	RRAGB	99	97.377	Heterocephalus_glaber_female
ENSSHAG00000001266	-	92	99.361	ENSHGLG00100020985	RRAGA	100	99.361	Heterocephalus_glaber_male
ENSSHAG00000001266	-	92	96.166	ENSHCOG00000006819	rraga	99	96.166	Hippocampus_comes
ENSSHAG00000001266	-	92	96.486	ENSIPUG00000014734	Rraga	99	96.486	Ictalurus_punctatus
ENSSHAG00000001266	-	89	98.339	ENSSTOG00000004660	RRAGB	100	98.339	Ictidomys_tridecemlineatus
ENSSHAG00000001266	-	92	99.681	ENSJJAG00000008212	Rraga	100	99.681	Jaculus_jaculus
ENSSHAG00000001266	-	90	97.712	ENSJJAG00000021386	Rragb	98	97.712	Jaculus_jaculus
ENSSHAG00000001266	-	92	96.486	ENSKMAG00000005709	rraga	99	96.486	Kryptolebias_marmoratus
ENSSHAG00000001266	-	92	96.486	ENSLBEG00000004506	rraga	99	96.486	Labrus_bergylta
ENSSHAG00000001266	-	92	98.403	ENSLACG00000016067	RRAGB	100	98.403	Latimeria_chalumnae
ENSSHAG00000001266	-	92	96.805	ENSLOCG00000014979	rraga	99	96.805	Lepisosteus_oculatus
ENSSHAG00000001266	-	92	99.361	ENSLAFG00000011082	RRAGA	100	99.361	Loxodonta_africana
ENSSHAG00000001266	-	94	96.262	ENSMFAG00000041833	RRAGB	93	96.262	Macaca_fascicularis
ENSSHAG00000001266	-	92	99.681	ENSMFAG00000030433	RRAGA	100	99.681	Macaca_fascicularis
ENSSHAG00000001266	-	90	98.033	ENSMMUG00000017635	RRAGB	99	98.033	Macaca_mulatta
ENSSHAG00000001266	-	98	95.238	ENSMMUG00000018395	RRAGA	96	95.238	Macaca_mulatta
ENSSHAG00000001266	-	92	99.681	ENSMNEG00000019531	RRAGA	100	99.681	Macaca_nemestrina
ENSSHAG00000001266	-	94	96.262	ENSMLEG00000004971	RRAGB	93	96.262	Mandrillus_leucophaeus
ENSSHAG00000001266	-	92	99.681	ENSMLEG00000025200	RRAGA	100	99.681	Mandrillus_leucophaeus
ENSSHAG00000001266	-	92	96.166	ENSMAMG00000012091	rraga	99	96.166	Mastacembelus_armatus
ENSSHAG00000001266	-	92	96.805	ENSMZEG00005015085	rraga	99	96.805	Maylandia_zebra
ENSSHAG00000001266	-	92	99.361	ENSMGAG00000005575	RRAGB	100	99.361	Meleagris_gallopavo
ENSSHAG00000001266	-	92	99.681	ENSMAUG00000003702	Rraga	100	99.681	Mesocricetus_auratus
ENSSHAG00000001266	-	92	99.681	ENSMICG00000016534	RRAGA	100	99.681	Microcebus_murinus
ENSSHAG00000001266	-	94	96.262	ENSMICG00000035059	RRAGB	93	96.262	Microcebus_murinus
ENSSHAG00000001266	-	89	98.026	ENSMOCG00000010568	Rragb	98	98.026	Microtus_ochrogaster
ENSSHAG00000001266	-	90	100.000	ENSMODG00000011337	RRAGB	100	100.000	Monodelphis_domestica
ENSSHAG00000001266	-	92	96.486	ENSMALG00000020662	rraga	99	96.486	Monopterus_albus
ENSSHAG00000001266	-	92	99.681	MGP_CAROLIEiJ_G0026131	Rraga	100	99.681	Mus_caroli
ENSSHAG00000001266	-	92	99.681	ENSMUSG00000070934	Rraga	100	99.681	Mus_musculus
ENSSHAG00000001266	-	92	99.681	MGP_PahariEiJ_G0028469	Rraga	100	99.681	Mus_pahari
ENSSHAG00000001266	-	92	99.681	MGP_SPRETEiJ_G0027096	Rraga	100	99.681	Mus_spretus
ENSSHAG00000001266	-	92	99.681	ENSMPUG00000019121	RRAGA	100	99.681	Mustela_putorius_furo
ENSSHAG00000001266	-	92	99.681	ENSMLUG00000010870	RRAGA	100	99.681	Myotis_lucifugus
ENSSHAG00000001266	-	90	98.046	ENSNGAG00000015964	Rragb	99	98.046	Nannospalax_galili
ENSSHAG00000001266	-	92	99.681	ENSNGAG00000007602	Rraga	100	99.681	Nannospalax_galili
ENSSHAG00000001266	-	92	96.805	ENSNBRG00000016166	rraga	99	96.805	Neolamprologus_brichardi
ENSSHAG00000001266	-	92	99.681	ENSNLEG00000018985	RRAGA	100	99.681	Nomascus_leucogenys
ENSSHAG00000001266	-	94	96.262	ENSNLEG00000016350	RRAGB	93	96.262	Nomascus_leucogenys
ENSSHAG00000001266	-	92	99.681	ENSOPRG00000005886	RRAGA	100	99.681	Ochotona_princeps
ENSSHAG00000001266	-	92	94.637	ENSODEG00000002951	RRAGB	99	94.637	Octodon_degus
ENSSHAG00000001266	-	92	99.361	ENSODEG00000020270	RRAGA	100	99.361	Octodon_degus
ENSSHAG00000001266	-	92	96.805	ENSONIG00000004447	rraga	99	96.805	Oreochromis_niloticus
ENSSHAG00000001266	-	56	97.884	ENSOANG00000031844	RRAGB	89	97.884	Ornithorhynchus_anatinus
ENSSHAG00000001266	-	92	99.681	ENSOCUG00000003506	RRAGA	100	99.681	Oryctolagus_cuniculus
ENSSHAG00000001266	-	92	96.486	ENSORLG00000009278	rraga	99	96.486	Oryzias_latipes
ENSSHAG00000001266	-	92	96.486	ENSORLG00020001597	rraga	99	96.486	Oryzias_latipes_hni
ENSSHAG00000001266	-	92	96.486	ENSORLG00015005697	rraga	99	96.486	Oryzias_latipes_hsok
ENSSHAG00000001266	-	92	96.166	ENSOMEG00000005139	rraga	99	96.678	Oryzias_melastigma
ENSSHAG00000001266	-	92	99.682	ENSOARG00000008644	RRAGA	100	99.682	Ovis_aries
ENSSHAG00000001266	-	93	97.468	ENSOARG00000005619	RRAGB	91	97.468	Ovis_aries
ENSSHAG00000001266	-	94	96.262	ENSPPAG00000034614	RRAGB	93	96.262	Pan_paniscus
ENSSHAG00000001266	-	92	99.681	ENSPPAG00000012463	RRAGA	100	99.681	Pan_paniscus
ENSSHAG00000001266	-	94	96.262	ENSPPRG00000021943	RRAGB	93	96.262	Panthera_pardus
ENSSHAG00000001266	-	92	99.681	ENSPPRG00000021236	RRAGA	100	99.681	Panthera_pardus
ENSSHAG00000001266	-	91	96.764	ENSPTIG00000005300	RRAGB	89	96.764	Panthera_tigris_altaica
ENSSHAG00000001266	-	95	97.239	ENSPTRG00000020798	RRAGA	96	97.239	Pan_troglodytes
ENSSHAG00000001266	-	94	96.262	ENSPTRG00000021955	RRAGB	93	96.262	Pan_troglodytes
ENSSHAG00000001266	-	92	99.681	ENSPANG00000000085	RRAGA	100	99.681	Papio_anubis
ENSSHAG00000001266	-	94	96.262	ENSPANG00000003594	RRAGB	93	96.262	Papio_anubis
ENSSHAG00000001266	-	92	96.805	ENSPKIG00000021851	rraga	99	96.805	Paramormyrops_kingsleyae
ENSSHAG00000001266	-	92	99.361	ENSPSIG00000012621	RRAGB	100	99.361	Pelodiscus_sinensis
ENSSHAG00000001266	-	92	96.166	ENSPMGG00000009530	rraga	99	96.166	Periophthalmus_magnuspinnatus
ENSSHAG00000001266	-	100	99.412	ENSPCIG00000010545	RRAGB	100	99.412	Phascolarctos_cinereus
ENSSHAG00000001266	-	92	96.166	ENSPFOG00000019453	rraga	98	96.166	Poecilia_formosa
ENSSHAG00000001266	-	92	96.166	ENSPLAG00000006541	rraga	99	96.166	Poecilia_latipinna
ENSSHAG00000001266	-	92	96.166	ENSPMEG00000008057	rraga	99	96.166	Poecilia_mexicana
ENSSHAG00000001266	-	92	96.166	ENSPREG00000021154	rraga	99	96.166	Poecilia_reticulata
ENSSHAG00000001266	-	94	96.262	ENSPPYG00000020398	RRAGB	93	96.262	Pongo_abelii
ENSSHAG00000001266	-	92	99.681	ENSPPYG00000019196	RRAGA	100	99.681	Pongo_abelii
ENSSHAG00000001266	-	92	99.681	ENSPCAG00000003962	RRAGA	100	99.681	Procavia_capensis
ENSSHAG00000001266	-	92	99.681	ENSPCOG00000013740	RRAGA	100	99.681	Propithecus_coquereli
ENSSHAG00000001266	-	94	96.262	ENSPCOG00000009451	RRAGB	93	96.262	Propithecus_coquereli
ENSSHAG00000001266	-	92	96.805	ENSPNYG00000021130	rraga	99	96.805	Pundamilia_nyererei
ENSSHAG00000001266	-	92	91.374	ENSPNAG00000011028	rraga	99	91.401	Pygocentrus_nattereri
ENSSHAG00000001266	-	92	99.681	ENSRNOG00000007051	Rraga	100	99.681	Rattus_norvegicus
ENSSHAG00000001266	-	85	82.699	ENSRBIG00000031864	RRAGB	89	83.986	Rhinopithecus_bieti
ENSSHAG00000001266	-	92	99.681	ENSRBIG00000003572	RRAGA	100	99.681	Rhinopithecus_bieti
ENSSHAG00000001266	-	92	99.681	ENSRROG00000002426	RRAGA	100	99.681	Rhinopithecus_roxellana
ENSSHAG00000001266	-	86	51.623	YML121W	-	98	51.623	Saccharomyces_cerevisiae
ENSSHAG00000001266	-	94	96.262	ENSSBOG00000012810	RRAGB	93	96.262	Saimiri_boliviensis_boliviensis
ENSSHAG00000001266	-	92	99.681	ENSSBOG00000008170	-	100	99.681	Saimiri_boliviensis_boliviensis
ENSSHAG00000001266	-	92	96.166	ENSSFOG00015011428	rraga	99	96.166	Scleropages_formosus
ENSSHAG00000001266	-	92	96.486	ENSSMAG00000017797	rraga	99	96.486	Scophthalmus_maximus
ENSSHAG00000001266	-	92	96.486	ENSSDUG00000014535	rraga	99	96.486	Seriola_dumerili
ENSSHAG00000001266	-	92	96.486	ENSSLDG00000014834	rraga	99	96.486	Seriola_lalandi_dorsalis
ENSSHAG00000001266	-	89	97.697	ENSSPUG00000019253	RRAGB	100	97.697	Sphenodon_punctatus
ENSSHAG00000001266	-	92	96.486	ENSSPAG00000009979	rraga	99	96.486	Stegastes_partitus
ENSSHAG00000001266	-	92	99.681	ENSSSCG00000005174	RRAGA	100	99.681	Sus_scrofa
ENSSHAG00000001266	-	94	96.262	ENSSSCG00000037228	RRAGB	98	96.262	Sus_scrofa
ENSSHAG00000001266	-	92	99.045	ENSTGUG00000005543	RRAGB	100	99.045	Taeniopygia_guttata
ENSSHAG00000001266	-	92	96.486	ENSTRUG00000013796	rraga	99	96.486	Takifugu_rubripes
ENSSHAG00000001266	-	92	96.805	ENSTNIG00000011814	rraga	99	96.805	Tetraodon_nigroviridis
ENSSHAG00000001266	-	94	96.262	ENSUAMG00000004721	RRAGB	93	96.262	Ursus_americanus
ENSSHAG00000001266	-	89	99.670	ENSUAMG00000001776	RRAGA	98	99.670	Ursus_americanus
ENSSHAG00000001266	-	94	96.262	ENSUMAG00000024099	RRAGB	93	96.262	Ursus_maritimus
ENSSHAG00000001266	-	93	99.367	ENSVVUG00000000604	RRAGA	96	96.084	Vulpes_vulpes
ENSSHAG00000001266	-	85	96.886	ENSVVUG00000015486	RRAGB	77	96.886	Vulpes_vulpes
ENSSHAG00000001266	-	92	98.083	ENSXETG00000000887	rraga	100	98.083	Xenopus_tropicalis
ENSSHAG00000001266	-	92	96.166	ENSXMAG00000012105	rraga	99	96.166	Xiphophorus_maculatus