EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000001279 (Gene tree)
Gene ID: 100920752
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 84440 bases
Position: chrGL864746.1:9098-93537
Accession: 100920752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001436	ResIII	PF04851.15	2.8e-09	1	1
ENSSHAP00000001437	ResIII	PF04851.15	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001452	SMARCAD1-201	3161	-	ENSSHAP00000001436	1037 (aa)	-	G3VE32
ENSSHAT00000001453	SMARCAD1-202	3131	XM_012551970	ENSSHAP00000001437	1027 (aa)	XP_012407424	G3VE33

Gene Model

Click here to download ENSSHAG00000001279's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001279	SMARCAD1	100	82.529	ENSG00000163104	SMARCAD1	100	91.107	Homo_sapiens
ENSSHAG00000001279	SMARCAD1	94	66.921	ENSAPOG00000011446	smarcad1a	86	66.921	Acanthochromis_polyacanthus
ENSSHAG00000001279	SMARCAD1	100	82.466	ENSAMEG00000005844	SMARCAD1	100	82.563	Ailuropoda_melanoleuca
ENSSHAG00000001279	SMARCAD1	68	69.703	ENSACIG00000018326	smarcad1a	87	67.949	Amphilophus_citrinellus
ENSSHAG00000001279	SMARCAD1	100	65.569	ENSAOCG00000019762	smarcad1a	95	65.569	Amphiprion_ocellaris
ENSSHAG00000001279	SMARCAD1	100	65.719	ENSAPEG00000003889	smarcad1a	92	65.719	Amphiprion_percula
ENSSHAG00000001279	SMARCAD1	83	64.646	ENSATEG00000015608	smarcad1a	91	64.646	Anabas_testudineus
ENSSHAG00000001279	SMARCAD1	93	73.782	ENSAPLG00000004630	SMARCAD1	100	74.534	Anas_platyrhynchos
ENSSHAG00000001279	SMARCAD1	100	71.070	ENSACAG00000013554	SMARCAD1	100	71.042	Anolis_carolinensis
ENSSHAG00000001279	SMARCAD1	100	82.081	ENSANAG00000020488	SMARCAD1	99	85.066	Aotus_nancymaae
ENSSHAG00000001279	SMARCAD1	91	67.707	ENSACLG00000017063	smarcad1a	100	56.848	Astatotilapia_calliptera
ENSSHAG00000001279	SMARCAD1	65	62.742	ENSAMXG00000015470	smarcad1a	93	63.189	Astyanax_mexicanus
ENSSHAG00000001279	SMARCAD1	79	59.179	ENSAMXG00000019130	smarcad1b	88	59.179	Astyanax_mexicanus
ENSSHAG00000001279	SMARCAD1	100	82.002	ENSBTAG00000017061	SMARCAD1	100	81.906	Bos_taurus
ENSSHAG00000001279	SMARCAD1	61	43.082	WBGene00010845	M03C11.8	71	40.590	Caenorhabditis_elegans
ENSSHAG00000001279	SMARCAD1	100	82.415	ENSCJAG00000006778	SMARCAD1	100	82.319	Callithrix_jacchus
ENSSHAG00000001279	SMARCAD1	100	82.563	ENSCAFG00000010026	SMARCAD1	100	82.466	Canis_familiaris
ENSSHAG00000001279	SMARCAD1	85	86.917	ENSCAFG00020003994	SMARCAD1	99	86.917	Canis_lupus_dingo
ENSSHAG00000001279	SMARCAD1	100	82.177	ENSCHIG00000012905	SMARCAD1	100	82.081	Capra_hircus
ENSSHAG00000001279	SMARCAD1	100	82.546	ENSTSYG00000002706	SMARCAD1	100	82.449	Carlito_syrichta
ENSSHAG00000001279	SMARCAD1	90	68.932	ENSCAPG00000016744	SMARCAD1	96	69.556	Cavia_aperea
ENSSHAG00000001279	SMARCAD1	100	81.757	ENSCPOG00000011398	SMARCAD1	100	81.757	Cavia_porcellus
ENSSHAG00000001279	SMARCAD1	100	82.239	ENSCCAG00000022264	SMARCAD1	100	90.940	Cebus_capucinus
ENSSHAG00000001279	SMARCAD1	100	82.529	ENSCATG00000035663	SMARCAD1	100	85.955	Cercocebus_atys
ENSSHAG00000001279	SMARCAD1	82	86.326	ENSCSAG00000004186	SMARCAD1	100	86.326	Chlorocebus_sabaeus
ENSSHAG00000001279	SMARCAD1	100	76.448	ENSCPBG00000013203	SMARCAD1	100	76.245	Chrysemys_picta_bellii
ENSSHAG00000001279	SMARCAD1	64	49.850	ENSCING00000001688	-	99	49.850	Ciona_intestinalis
ENSSHAG00000001279	SMARCAD1	100	82.336	ENSCANG00000003556	SMARCAD1	100	91.107	Colobus_angolensis_palliatus
ENSSHAG00000001279	SMARCAD1	100	80.773	ENSCGRG00001015056	Smarcad1	100	80.676	Cricetulus_griseus_chok1gshd
ENSSHAG00000001279	SMARCAD1	100	80.773	ENSCGRG00000014087	Smarcad1	100	80.676	Cricetulus_griseus_crigri
ENSSHAG00000001279	SMARCAD1	96	63.690	ENSCSEG00000017903	smarcad1a	88	63.690	Cynoglossus_semilaevis
ENSSHAG00000001279	SMARCAD1	81	62.798	ENSCSEG00000014419	-	83	62.798	Cynoglossus_semilaevis
ENSSHAG00000001279	SMARCAD1	93	51.939	ENSDARG00000073721	smarcad1b	98	53.333	Danio_rerio
ENSSHAG00000001279	SMARCAD1	89	51.791	ENSDARG00000014041	smarcad1a	98	53.479	Danio_rerio
ENSSHAG00000001279	SMARCAD1	100	82.239	ENSDNOG00000000806	-	100	82.143	Dasypus_novemcinctus
ENSSHAG00000001279	SMARCAD1	100	80.542	ENSDORG00000012331	Smarcad1	100	80.348	Dipodomys_ordii
ENSSHAG00000001279	SMARCAD1	63	45.692	FBgn0032157	Etl1	84	43.515	Drosophila_melanogaster
ENSSHAG00000001279	SMARCAD1	62	46.237	ENSEBUG00000003969	smarcad1a	96	46.677	Eptatretus_burgeri
ENSSHAG00000001279	SMARCAD1	100	82.563	ENSEASG00005012382	SMARCAD1	100	82.563	Equus_asinus_asinus
ENSSHAG00000001279	SMARCAD1	100	82.563	ENSECAG00000011562	SMARCAD1	100	82.563	Equus_caballus
ENSSHAG00000001279	SMARCAD1	79	57.952	ENSELUG00000019154	smarcad1b	93	52.735	Esox_lucius
ENSSHAG00000001279	SMARCAD1	100	51.161	ENSELUG00000018535	smarcad1a	100	50.975	Esox_lucius
ENSSHAG00000001279	SMARCAD1	100	82.932	ENSFCAG00000003958	SMARCAD1	100	91.443	Felis_catus
ENSSHAG00000001279	SMARCAD1	100	68.870	ENSFALG00000006089	SMARCAD1	100	68.371	Ficedula_albicollis
ENSSHAG00000001279	SMARCAD1	100	81.660	ENSFDAG00000017027	SMARCAD1	100	81.564	Fukomys_damarensis
ENSSHAG00000001279	SMARCAD1	94	65.321	ENSFHEG00000012778	smarcad1a	86	63.362	Fundulus_heteroclitus
ENSSHAG00000001279	SMARCAD1	84	56.928	ENSGMOG00000018995	smarcad1a	97	57.044	Gadus_morhua
ENSSHAG00000001279	SMARCAD1	77	75.853	ENSGALG00000037339	SMARCAD1	95	75.853	Gallus_gallus
ENSSHAG00000001279	SMARCAD1	74	66.667	ENSGAFG00000013498	smarcad1a	74	66.667	Gambusia_affinis
ENSSHAG00000001279	SMARCAD1	86	57.397	ENSGACG00000007327	smarcad1a	99	58.119	Gasterosteus_aculeatus
ENSSHAG00000001279	SMARCAD1	100	76.204	ENSGAGG00000008582	SMARCAD1	100	75.477	Gopherus_agassizii
ENSSHAG00000001279	SMARCAD1	100	82.529	ENSGGOG00000023001	SMARCAD1	100	82.432	Gorilla_gorilla
ENSSHAG00000001279	SMARCAD1	100	58.175	ENSHBUG00000011042	smarcad1a	100	56.627	Haplochromis_burtoni
ENSSHAG00000001279	SMARCAD1	100	81.950	ENSHGLG00000005070	SMARCAD1	100	81.950	Heterocephalus_glaber_female
ENSSHAG00000001279	SMARCAD1	100	81.950	ENSHGLG00100006812	SMARCAD1	100	81.950	Heterocephalus_glaber_male
ENSSHAG00000001279	SMARCAD1	99	64.386	ENSHCOG00000007848	smarcad1a	94	63.063	Hippocampus_comes
ENSSHAG00000001279	SMARCAD1	94	52.254	ENSIPUG00000022817	smarcad1b	99	52.454	Ictalurus_punctatus
ENSSHAG00000001279	SMARCAD1	75	65.102	ENSIPUG00000000242	smarcad1a	95	60.357	Ictalurus_punctatus
ENSSHAG00000001279	SMARCAD1	100	82.143	ENSSTOG00000001227	SMARCAD1	100	82.046	Ictidomys_tridecemlineatus
ENSSHAG00000001279	SMARCAD1	100	81.950	ENSJJAG00000022342	Smarcad1	100	81.853	Jaculus_jaculus
ENSSHAG00000001279	SMARCAD1	93	64.350	ENSKMAG00000021351	smarcad1a	88	63.596	Kryptolebias_marmoratus
ENSSHAG00000001279	SMARCAD1	81	66.866	ENSLBEG00000008088	smarcad1a	89	66.866	Labrus_bergylta
ENSSHAG00000001279	SMARCAD1	100	55.996	ENSLOCG00000012909	smarcad1a	100	56.388	Lepisosteus_oculatus
ENSSHAG00000001279	SMARCAD1	100	80.212	ENSLAFG00000000040	SMARCAD1	100	80.116	Loxodonta_africana
ENSSHAG00000001279	SMARCAD1	100	82.432	ENSMFAG00000042606	SMARCAD1	100	85.955	Macaca_fascicularis
ENSSHAG00000001279	SMARCAD1	86	85.955	ENSMMUG00000022242	SMARCAD1	100	85.955	Macaca_mulatta
ENSSHAG00000001279	SMARCAD1	100	82.529	ENSMNEG00000038117	SMARCAD1	100	91.275	Macaca_nemestrina
ENSSHAG00000001279	SMARCAD1	100	82.625	ENSMLEG00000038333	SMARCAD1	100	91.107	Mandrillus_leucophaeus
ENSSHAG00000001279	SMARCAD1	65	66.963	ENSMAMG00000000933	smarcad1a	64	66.963	Mastacembelus_armatus
ENSSHAG00000001279	SMARCAD1	91	67.707	ENSMZEG00005005203	smarcad1a	100	50.549	Maylandia_zebra
ENSSHAG00000001279	SMARCAD1	93	65.015	ENSMGAG00000005577	SMARCAD1	100	65.015	Meleagris_gallopavo
ENSSHAG00000001279	SMARCAD1	100	81.063	ENSMAUG00000008417	Smarcad1	100	80.966	Mesocricetus_auratus
ENSSHAG00000001279	SMARCAD1	100	81.232	ENSMICG00000009746	SMARCAD1	100	81.136	Microcebus_murinus
ENSSHAG00000001279	SMARCAD1	100	80.483	ENSMOCG00000017142	Smarcad1	100	80.483	Microtus_ochrogaster
ENSSHAG00000001279	SMARCAD1	77	59.212	ENSMMOG00000000275	smarcad1a	98	66.771	Mola_mola
ENSSHAG00000001279	SMARCAD1	100	96.599	ENSMODG00000019268	SMARCAD1	100	96.599	Monodelphis_domestica
ENSSHAG00000001279	SMARCAD1	95	84.670	MGP_CAROLIEiJ_G0028458	-	77	84.670	Mus_caroli
ENSSHAG00000001279	SMARCAD1	100	80.290	ENSMUSG00000029920	Smarcad1	100	80.386	Mus_musculus
ENSSHAG00000001279	SMARCAD1	100	80.405	MGP_PahariEiJ_G0022198	Smarcad1	100	80.502	Mus_pahari
ENSSHAG00000001279	SMARCAD1	100	80.502	MGP_SPRETEiJ_G0029462	Smarcad1	100	80.598	Mus_spretus
ENSSHAG00000001279	SMARCAD1	100	82.659	ENSMPUG00000002111	SMARCAD1	100	82.563	Mustela_putorius_furo
ENSSHAG00000001279	SMARCAD1	100	80.829	ENSMLUG00000000425	SMARCAD1	100	80.636	Myotis_lucifugus
ENSSHAG00000001279	SMARCAD1	100	81.262	ENSNGAG00000000810	Smarcad1	100	81.262	Nannospalax_galili
ENSSHAG00000001279	SMARCAD1	61	67.788	ENSNBRG00000012749	smarcad1a	85	61.925	Neolamprologus_brichardi
ENSSHAG00000001279	SMARCAD1	100	82.529	ENSNLEG00000014225	SMARCAD1	100	91.107	Nomascus_leucogenys
ENSSHAG00000001279	SMARCAD1	100	81.178	ENSODEG00000004334	SMARCAD1	100	81.081	Octodon_degus
ENSSHAG00000001279	SMARCAD1	63	67.130	ENSONIG00000015059	smarcad1a	89	59.361	Oreochromis_niloticus
ENSSHAG00000001279	SMARCAD1	80	87.077	ENSOANG00000013764	SMARCAD1	100	87.198	Ornithorhynchus_anatinus
ENSSHAG00000001279	SMARCAD1	100	82.512	ENSOCUG00000017283	SMARCAD1	100	82.415	Oryctolagus_cuniculus
ENSSHAG00000001279	SMARCAD1	93	65.663	ENSORLG00000004869	smarcad1a	100	48.367	Oryzias_latipes
ENSSHAG00000001279	SMARCAD1	93	65.663	ENSORLG00020020569	smarcad1a	87	65.663	Oryzias_latipes_hni
ENSSHAG00000001279	SMARCAD1	65	65.512	ENSORLG00015009045	smarcad1a	63	64.933	Oryzias_latipes_hsok
ENSSHAG00000001279	SMARCAD1	99	65.263	ENSOMEG00000023032	smarcad1a	91	64.785	Oryzias_melastigma
ENSSHAG00000001279	SMARCAD1	100	81.118	ENSOGAG00000011444	SMARCAD1	100	81.021	Otolemur_garnettii
ENSSHAG00000001279	SMARCAD1	100	82.177	ENSOARG00000017851	SMARCAD1	100	82.081	Ovis_aries
ENSSHAG00000001279	SMARCAD1	100	82.432	ENSPPAG00000035715	SMARCAD1	100	82.336	Pan_paniscus
ENSSHAG00000001279	SMARCAD1	100	82.932	ENSPPRG00000024756	SMARCAD1	100	91.443	Panthera_pardus
ENSSHAG00000001279	SMARCAD1	100	82.772	ENSPTIG00000017868	SMARCAD1	100	82.676	Panthera_tigris_altaica
ENSSHAG00000001279	SMARCAD1	100	82.529	ENSPTRG00000023126	SMARCAD1	100	91.107	Pan_troglodytes
ENSSHAG00000001279	SMARCAD1	100	81.232	ENSPANG00000019757	SMARCAD1	100	81.136	Papio_anubis
ENSSHAG00000001279	SMARCAD1	100	74.712	ENSPSIG00000010255	SMARCAD1	100	74.881	Pelodiscus_sinensis
ENSSHAG00000001279	SMARCAD1	62	65.785	ENSPMGG00000010735	smarcad1a	96	63.836	Periophthalmus_magnuspinnatus
ENSSHAG00000001279	SMARCAD1	100	69.052	ENSPEMG00000001854	Smarcad1	100	69.052	Peromyscus_maniculatus_bairdii
ENSSHAG00000001279	SMARCAD1	99	46.717	ENSPMAG00000003516	smarcad1a	99	46.813	Petromyzon_marinus
ENSSHAG00000001279	SMARCAD1	77	98.359	ENSPCIG00000008137	SMARCAD1	98	98.626	Phascolarctos_cinereus
ENSSHAG00000001279	SMARCAD1	79	66.927	ENSPFOG00000019116	smarcad1a	86	57.531	Poecilia_formosa
ENSSHAG00000001279	SMARCAD1	78	66.771	ENSPLAG00000000108	smarcad1a	86	57.407	Poecilia_latipinna
ENSSHAG00000001279	SMARCAD1	79	66.927	ENSPMEG00000009155	smarcad1a	86	57.531	Poecilia_mexicana
ENSSHAG00000001279	SMARCAD1	75	67.083	ENSPREG00000018185	smarcad1a	91	62.311	Poecilia_reticulata
ENSSHAG00000001279	SMARCAD1	100	82.160	ENSPPYG00000014935	SMARCAD1	100	82.064	Pongo_abelii
ENSSHAG00000001279	SMARCAD1	79	81.955	ENSPCOG00000020478	SMARCAD1	91	81.955	Propithecus_coquereli
ENSSHAG00000001279	SMARCAD1	100	81.328	ENSPVAG00000001760	SMARCAD1	100	81.232	Pteropus_vampyrus
ENSSHAG00000001279	SMARCAD1	78	56.350	ENSPNYG00000010087	smarcad1a	93	56.134	Pundamilia_nyererei
ENSSHAG00000001279	SMARCAD1	100	51.229	ENSPNAG00000001663	smarcad1a	90	56.648	Pygocentrus_nattereri
ENSSHAG00000001279	SMARCAD1	78	59.559	ENSPNAG00000010099	smarcad1b	99	53.721	Pygocentrus_nattereri
ENSSHAG00000001279	SMARCAD1	100	80.309	ENSRNOG00000006391	Smarcad1	100	80.212	Rattus_norvegicus
ENSSHAG00000001279	SMARCAD1	100	82.336	ENSRBIG00000041989	SMARCAD1	100	82.239	Rhinopithecus_bieti
ENSSHAG00000001279	SMARCAD1	100	82.336	ENSRROG00000035309	SMARCAD1	100	82.239	Rhinopithecus_roxellana
ENSSHAG00000001279	SMARCAD1	100	82.143	ENSSBOG00000032114	SMARCAD1	100	90.940	Saimiri_boliviensis_boliviensis
ENSSHAG00000001279	SMARCAD1	84	56.623	ENSSFOG00015016814	smarcad1b	96	53.707	Scleropages_formosus
ENSSHAG00000001279	SMARCAD1	74	58.732	ENSSFOG00015020909	smarcad1a	100	58.732	Scleropages_formosus
ENSSHAG00000001279	SMARCAD1	76	66.320	ENSSMAG00000001326	smarcad1a	81	66.320	Scophthalmus_maximus
ENSSHAG00000001279	SMARCAD1	62	67.551	ENSSDUG00000022338	smarcad1a	76	67.551	Seriola_dumerili
ENSSHAG00000001279	SMARCAD1	91	67.239	ENSSLDG00000024986	smarcad1a	90	67.239	Seriola_lalandi_dorsalis
ENSSHAG00000001279	SMARCAD1	58	87.102	ENSSPUG00000004633	SMARCAD1	100	87.102	Sphenodon_punctatus
ENSSHAG00000001279	SMARCAD1	94	66.320	ENSSPAG00000001970	smarcad1a	93	66.320	Stegastes_partitus
ENSSHAG00000001279	SMARCAD1	100	82.563	ENSSSCG00000009193	SMARCAD1	100	86.817	Sus_scrofa
ENSSHAG00000001279	SMARCAD1	76	78.299	ENSTGUG00000003127	SMARCAD1	100	78.553	Taeniopygia_guttata
ENSSHAG00000001279	SMARCAD1	86	56.546	ENSTNIG00000017585	smarcad1a	99	56.546	Tetraodon_nigroviridis
ENSSHAG00000001279	SMARCAD1	91	89.881	ENSTBEG00000002789	SMARCAD1	91	89.881	Tupaia_belangeri
ENSSHAG00000001279	SMARCAD1	97	82.920	ENSTTRG00000000226	SMARCAD1	99	83.367	Tursiops_truncatus
ENSSHAG00000001279	SMARCAD1	100	82.466	ENSUAMG00000022262	SMARCAD1	99	86.061	Ursus_americanus
ENSSHAG00000001279	SMARCAD1	100	82.546	ENSUMAG00000004549	SMARCAD1	100	82.642	Ursus_maritimus
ENSSHAG00000001279	SMARCAD1	100	82.563	ENSVVUG00000007271	SMARCAD1	100	86.817	Vulpes_vulpes
ENSSHAG00000001279	SMARCAD1	87	63.987	ENSXETG00000019214	smarcad1	100	66.135	Xenopus_tropicalis
ENSSHAG00000001279	SMARCAD1	76	58.440	ENSXCOG00000005232	smarcad1a	91	56.500	Xiphophorus_couchianus
ENSSHAG00000001279	SMARCAD1	82	61.756	ENSXMAG00000015350	smarcad1a	81	60.966	Xiphophorus_maculatus