EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000001581 (Gene tree)
Gene ID: 100921849
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 78079 bases
Position: chrGL849535.1:13543-91621
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001774	RRM_1	PF00076.22	2e-09	1	1
ENSSHAP00000001773	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001793	SCAF4-202	3191	-	ENSSHAP00000001774	1037 (aa)	-	G3VF20
ENSSHAT00000001792	SCAF4-201	3240	-	ENSSHAP00000001773	1079 (aa)	-	G3VF19

Gene Model

Click here to download ENSSHAG00000001581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001581	SCAF4	100	82.927	ENSG00000156304	SCAF4	100	84.059	Homo_sapiens
ENSSHAG00000001581	SCAF4	73	85.488	ENSAMEG00000014987	SCAF4	97	86.077	Ailuropoda_melanoleuca
ENSSHAG00000001581	SCAF4	99	78.040	ENSAPLG00000002509	SCAF4	99	77.223	Anas_platyrhynchos
ENSSHAG00000001581	SCAF4	95	69.136	ENSACAG00000002569	SCAF4	90	69.091	Anolis_carolinensis
ENSSHAG00000001581	SCAF4	100	82.942	ENSANAG00000037494	SCAF4	100	83.899	Aotus_nancymaae
ENSSHAG00000001581	SCAF4	56	57.252	ENSACLG00000024833	scaf4b	55	74.051	Astatotilapia_calliptera
ENSSHAG00000001581	SCAF4	96	52.102	ENSAMXG00000008585	scaf4a	60	64.207	Astyanax_mexicanus
ENSSHAG00000001581	SCAF4	100	82.795	ENSBTAG00000018855	SCAF4	100	83.755	Bos_taurus
ENSSHAG00000001581	SCAF4	100	82.783	ENSCJAG00000008993	SCAF4	99	86.315	Callithrix_jacchus
ENSSHAG00000001581	SCAF4	99	85.004	ENSCAFG00000008863	SCAF4	99	85.803	Canis_familiaris
ENSSHAG00000001581	SCAF4	99	83.066	ENSCAFG00020026019	SCAF4	100	84.148	Canis_lupus_dingo
ENSSHAG00000001581	SCAF4	100	82.635	ENSCHIG00000008385	SCAF4	100	83.246	Capra_hircus
ENSSHAG00000001581	SCAF4	99	80.748	ENSTSYG00000011344	SCAF4	99	78.285	Carlito_syrichta
ENSSHAG00000001581	SCAF4	99	81.979	ENSCPOG00000012443	SCAF4	99	82.332	Cavia_porcellus
ENSSHAG00000001581	SCAF4	100	83.246	ENSCCAG00000033727	SCAF4	100	84.468	Cebus_capucinus
ENSSHAG00000001581	SCAF4	99	84.305	ENSCATG00000030379	SCAF4	99	85.625	Cercocebus_atys
ENSSHAG00000001581	SCAF4	99	81.130	ENSCLAG00000006298	SCAF4	100	81.826	Chinchilla_lanigera
ENSSHAG00000001581	SCAF4	100	82.552	ENSCSAG00000009438	SCAF4	100	83.767	Chlorocebus_sabaeus
ENSSHAG00000001581	SCAF4	100	83.173	ENSCANG00000029847	SCAF4	100	84.481	Colobus_angolensis_palliatus
ENSSHAG00000001581	SCAF4	99	75.207	ENSCGRG00001020821	Scaf4	100	75.021	Cricetulus_griseus_chok1gshd
ENSSHAG00000001581	SCAF4	99	74.958	ENSCGRG00000014360	Scaf4	99	77.778	Cricetulus_griseus_crigri
ENSSHAG00000001581	SCAF4	68	43.646	ENSCSEG00000012808	-	56	66.061	Cynoglossus_semilaevis
ENSSHAG00000001581	SCAF4	100	80.368	ENSDNOG00000019014	SCAF4	94	81.245	Dasypus_novemcinctus
ENSSHAG00000001581	SCAF4	97	71.828	ENSETEG00000000583	SCAF4	99	72.636	Echinops_telfairi
ENSSHAG00000001581	SCAF4	100	83.625	ENSEASG00005007756	SCAF4	100	85.026	Equus_asinus_asinus
ENSSHAG00000001581	SCAF4	100	83.552	ENSECAG00000014248	SCAF4	100	84.952	Equus_caballus
ENSSHAG00000001581	SCAF4	100	83.829	ENSFCAG00000002228	SCAF4	100	84.703	Felis_catus
ENSSHAG00000001581	SCAF4	99	79.620	ENSFDAG00000017780	SCAF4	100	80.311	Fukomys_damarensis
ENSSHAG00000001581	SCAF4	52	57.692	ENSFHEG00000007634	scaf4b	54	70.886	Fundulus_heteroclitus
ENSSHAG00000001581	SCAF4	99	80.203	ENSGALG00000033965	SCAF4	100	78.038	Gallus_gallus
ENSSHAG00000001581	SCAF4	72	51.070	ENSGACG00000020580	scaf4a	58	60.185	Gasterosteus_aculeatus
ENSSHAG00000001581	SCAF4	92	81.081	ENSGGOG00000015557	SCAF4	99	85.498	Gorilla_gorilla
ENSSHAG00000001581	SCAF4	100	81.456	ENSHGLG00000010582	SCAF4	100	82.322	Heterocephalus_glaber_female
ENSSHAG00000001581	SCAF4	99	81.930	ENSHGLG00100009441	SCAF4	100	82.807	Heterocephalus_glaber_male
ENSSHAG00000001581	SCAF4	99	77.846	ENSSTOG00000004450	SCAF4	100	78.553	Ictidomys_tridecemlineatus
ENSSHAG00000001581	SCAF4	99	80.371	ENSJJAG00000019447	Scaf4	100	81.432	Jaculus_jaculus
ENSSHAG00000001581	SCAF4	97	63.237	ENSLACG00000013913	SCAF4	99	61.141	Latimeria_chalumnae
ENSSHAG00000001581	SCAF4	97	60.283	ENSLOCG00000009162	scaf4a	59	68.779	Lepisosteus_oculatus
ENSSHAG00000001581	SCAF4	98	88.132	ENSLAFG00000010710	SCAF4	99	87.431	Loxodonta_africana
ENSSHAG00000001581	SCAF4	99	84.093	ENSMFAG00000037668	SCAF4	99	85.320	Macaca_fascicularis
ENSSHAG00000001581	SCAF4	100	82.439	ENSMMUG00000001712	SCAF4	100	83.868	Macaca_mulatta
ENSSHAG00000001581	SCAF4	99	84.018	ENSMNEG00000032966	SCAF4	99	85.333	Macaca_nemestrina
ENSSHAG00000001581	SCAF4	99	83.042	ENSMLEG00000039674	SCAF4	100	84.353	Mandrillus_leucophaeus
ENSSHAG00000001581	SCAF4	99	78.857	ENSMGAG00000014515	SCAF4	100	78.494	Meleagris_gallopavo
ENSSHAG00000001581	SCAF4	99	81.028	ENSMAUG00000013307	Scaf4	100	81.810	Mesocricetus_auratus
ENSSHAG00000001581	SCAF4	99	85.305	ENSMICG00000005256	SCAF4	99	86.111	Microcebus_murinus
ENSSHAG00000001581	SCAF4	100	78.291	ENSMOCG00000012087	Scaf4	95	83.594	Microtus_ochrogaster
ENSSHAG00000001581	SCAF4	100	96.577	ENSMODG00000021040	SCAF4	100	96.577	Monodelphis_domestica
ENSSHAG00000001581	SCAF4	98	82.920	MGP_CAROLIEiJ_G0020944	Scaf4	95	81.795	Mus_caroli
ENSSHAG00000001581	SCAF4	99	81.889	ENSMUSG00000022983	Scaf4	100	77.321	Mus_musculus
ENSSHAG00000001581	SCAF4	99	73.800	MGP_PahariEiJ_G0016649	Scaf4	100	76.313	Mus_pahari
ENSSHAG00000001581	SCAF4	99	81.677	MGP_SPRETEiJ_G0021850	Scaf4	100	78.292	Mus_spretus
ENSSHAG00000001581	SCAF4	99	83.319	ENSMPUG00000001078	SCAF4	99	84.367	Mustela_putorius_furo
ENSSHAG00000001581	SCAF4	97	72.597	ENSMLUG00000011472	SCAF4	99	72.279	Myotis_lucifugus
ENSSHAG00000001581	SCAF4	99	81.618	ENSNGAG00000005214	Scaf4	99	82.647	Nannospalax_galili
ENSSHAG00000001581	SCAF4	100	82.927	ENSNLEG00000003569	SCAF4	100	84.059	Nomascus_leucogenys
ENSSHAG00000001581	SCAF4	86	85.326	ENSOPRG00000007016	SCAF4	77	88.636	Ochotona_princeps
ENSSHAG00000001581	SCAF4	73	82.530	ENSODEG00000002718	SCAF4	99	80.570	Octodon_degus
ENSSHAG00000001581	SCAF4	74	54.133	ENSONIG00000004687	scaf4a	56	64.352	Oreochromis_niloticus
ENSSHAG00000001581	SCAF4	100	79.671	ENSOCUG00000008336	SCAF4	63	84.203	Oryctolagus_cuniculus
ENSSHAG00000001581	SCAF4	59	53.497	ENSORLG00000003420	scaf4b	70	55.906	Oryzias_latipes
ENSSHAG00000001581	SCAF4	99	80.257	ENSOGAG00000014653	SCAF4	93	86.111	Otolemur_garnettii
ENSSHAG00000001581	SCAF4	99	82.923	ENSOARG00000013894	SCAF4	98	83.625	Ovis_aries
ENSSHAG00000001581	SCAF4	100	82.927	ENSPPAG00000028535	SCAF4	100	84.059	Pan_paniscus
ENSSHAG00000001581	SCAF4	99	84.541	ENSPPRG00000000635	SCAF4	100	85.424	Panthera_pardus
ENSSHAG00000001581	SCAF4	99	83.304	ENSPTIG00000021578	SCAF4	99	81.041	Panthera_tigris_altaica
ENSSHAG00000001581	SCAF4	100	82.927	ENSPTRG00000013848	SCAF4	100	84.059	Pan_troglodytes
ENSSHAG00000001581	SCAF4	99	83.540	ENSPANG00000017332	SCAF4	99	84.846	Papio_anubis
ENSSHAG00000001581	SCAF4	67	64.423	ENSPKIG00000022408	scaf4a	91	66.058	Paramormyrops_kingsleyae
ENSSHAG00000001581	SCAF4	99	80.148	ENSPSIG00000014242	SCAF4	58	88.782	Pelodiscus_sinensis
ENSSHAG00000001581	SCAF4	61	60.385	ENSPMGG00000016741	scaf4a	53	59.924	Periophthalmus_magnuspinnatus
ENSSHAG00000001581	SCAF4	99	97.007	ENSPCIG00000028183	SCAF4	91	97.007	Phascolarctos_cinereus
ENSSHAG00000001581	SCAF4	50	61.395	ENSPMEG00000006666	-	59	61.058	Poecilia_mexicana
ENSSHAG00000001581	SCAF4	51	60.360	ENSPREG00000013510	scaf4b	52	71.795	Poecilia_reticulata
ENSSHAG00000001581	SCAF4	100	82.768	ENSPPYG00000011355	SCAF4	100	84.405	Pongo_abelii
ENSSHAG00000001581	SCAF4	96	87.500	ENSPCAG00000009998	SCAF4	100	76.991	Procavia_capensis
ENSSHAG00000001581	SCAF4	99	84.870	ENSPCOG00000018710	SCAF4	99	86.034	Propithecus_coquereli
ENSSHAG00000001581	SCAF4	100	84.271	ENSPVAG00000005220	SCAF4	100	84.710	Pteropus_vampyrus
ENSSHAG00000001581	SCAF4	56	57.252	ENSPNYG00000010526	scaf4b	55	74.051	Pundamilia_nyererei
ENSSHAG00000001581	SCAF4	79	59.264	ENSPNAG00000016892	scaf4a	60	65.485	Pygocentrus_nattereri
ENSSHAG00000001581	SCAF4	98	75.668	ENSRNOG00000002104	Scaf4	66	92.118	Rattus_norvegicus
ENSSHAG00000001581	SCAF4	99	83.184	ENSRBIG00000040007	SCAF4	61	85.562	Rhinopithecus_bieti
ENSSHAG00000001581	SCAF4	100	83.421	ENSRROG00000029488	SCAF4	100	84.468	Rhinopithecus_roxellana
ENSSHAG00000001581	SCAF4	87	50.204	ENSSFOG00015006338	scaf4a	54	59.287	Scleropages_formosus
ENSSHAG00000001581	SCAF4	75	53.722	ENSSMAG00000003738	scaf4b	65	63.208	Scophthalmus_maximus
ENSSHAG00000001581	SCAF4	83	54.075	ENSSMAG00000017901	scaf4a	53	53.811	Scophthalmus_maximus
ENSSHAG00000001581	SCAF4	51	59.633	ENSSDUG00000012380	scaf4b	60	68.485	Seriola_dumerili
ENSSHAG00000001581	SCAF4	51	59.633	ENSSLDG00000023152	-	60	68.485	Seriola_lalandi_dorsalis
ENSSHAG00000001581	SCAF4	98	82.348	ENSSARG00000009994	SCAF4	100	81.217	Sorex_araneus
ENSSHAG00000001581	SCAF4	100	80.726	ENSSSCG00000021023	SCAF4	63	85.154	Sus_scrofa
ENSSHAG00000001581	SCAF4	78	71.600	ENSTGUG00000013464	SCAF4	95	75.749	Taeniopygia_guttata
ENSSHAG00000001581	SCAF4	55	56.522	ENSTRUG00000009536	-	60	68.072	Takifugu_rubripes
ENSSHAG00000001581	SCAF4	68	53.325	ENSTNIG00000009945	scaf4a	53	70.414	Tetraodon_nigroviridis
ENSSHAG00000001581	SCAF4	99	83.791	ENSTTRG00000010963	SCAF4	100	84.677	Tursiops_truncatus
ENSSHAG00000001581	SCAF4	100	82.058	ENSUAMG00000008860	SCAF4	63	86.486	Ursus_americanus
ENSSHAG00000001581	SCAF4	99	86.593	ENSUMAG00000016962	SCAF4	100	87.971	Ursus_maritimus
ENSSHAG00000001581	SCAF4	99	85.027	ENSVVUG00000002953	SCAF4	100	85.829	Vulpes_vulpes
ENSSHAG00000001581	SCAF4	99	57.390	ENSXETG00000007351	scaf4	64	64.689	Xenopus_tropicalis