EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000001642 (Gene tree)
Gene ID
100924016
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
81010 bases
Position
chrGL841403.1:14631-95640
Accession
100924016
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000001843ResIIIPF04851.151.3e-0911
ENSSHAP00000001842ResIIIPF04851.151.4e-0911
ENSSHAP00000001843BRKPF07533.161e-1711
ENSSHAP00000001842BRKPF07533.161.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000001864SMARCA4-2026880-ENSSHAP000000018431611 (aa)XP_012397347G3VF89
ENSSHAT00000001863SMARCA4-2017090-ENSSHAP000000018421681 (aa)-G3VF88
Gene Model
Click here to download ENSSHAG00000001642's gene model file
Pathways
Pathway IDPathway NameSource
shr04714ThermogenesisKEGG
shr05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001642's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000001642SMARCA49876.560ENSSHAG00000007884SMARCA29676.282
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000001642SMARCA410098.698ENSG00000127616SMARCA410099.062Homo_sapiens
ENSSHAG00000001642SMARCA49583.843ENSAPOG00000004542SMARCA49883.499Acanthochromis_polyacanthus
ENSSHAG00000001642SMARCA47687.881ENSAPOG00000003509smarca4a9886.437Acanthochromis_polyacanthus
ENSSHAG00000001642SMARCA410094.365ENSAMEG00000010868SMARCA410094.365Ailuropoda_melanoleuca
ENSSHAG00000001642SMARCA49584.756ENSACIG00000003035-9686.312Amphilophus_citrinellus
ENSSHAG00000001642SMARCA49987.639ENSACIG00000021550smarca4a9887.639Amphilophus_citrinellus
ENSSHAG00000001642SMARCA48986.159ENSAOCG00000019167smarca4a10086.455Amphiprion_ocellaris
ENSSHAG00000001642SMARCA49486.759ENSAOCG00000009450-9787.254Amphiprion_ocellaris
ENSSHAG00000001642SMARCA48986.228ENSAPEG00000015559smarca4a10086.524Amphiprion_percula
ENSSHAG00000001642SMARCA410083.047ENSAPEG00000023108-9983.155Amphiprion_percula
ENSSHAG00000001642SMARCA49983.718ENSATEG00000001094-9590.115Anabas_testudineus
ENSSHAG00000001642SMARCA410087.485ENSATEG00000011524smarca4a10087.919Anabas_testudineus
ENSSHAG00000001642SMARCA49998.323ENSANAG00000036991SMARCA410095.544Aotus_nancymaae
ENSSHAG00000001642SMARCA49988.589ENSACLG00000000163smarca4a9888.589Astatotilapia_calliptera
ENSSHAG00000001642SMARCA49584.095ENSACLG00000008638-9790.931Astatotilapia_calliptera
ENSSHAG00000001642SMARCA49486.979ENSAMXG00000011238-9886.364Astyanax_mexicanus
ENSSHAG00000001642SMARCA410097.831ENSBTAG00000019220SMARCA410097.831Bos_taurus
ENSSHAG00000001642SMARCA410095.544ENSCJAG00000005936SMARCA410095.544Callithrix_jacchus
ENSSHAG00000001642SMARCA410098.575ENSCAFG00000017584SMARCA410098.575Canis_familiaris
ENSSHAG00000001642SMARCA410098.575ENSCAFG00020024620SMARCA49998.575Canis_lupus_dingo
ENSSHAG00000001642SMARCA410093.259ENSCHIG00000015318SMARCA410093.197Capra_hircus
ENSSHAG00000001642SMARCA410098.205ENSTSYG00000012966SMARCA410098.084Carlito_syrichta
ENSSHAG00000001642SMARCA49488.220ENSCAPG00000015932SMARCA49596.007Cavia_aperea
ENSSHAG00000001642SMARCA410097.770ENSCPOG00000015549SMARCA410097.770Cavia_porcellus
ENSSHAG00000001642SMARCA410094.578ENSCCAG00000031660SMARCA49994.763Cebus_capucinus
ENSSHAG00000001642SMARCA410098.637ENSCATG00000029530SMARCA410098.637Cercocebus_atys
ENSSHAG00000001642SMARCA410097.706ENSCLAG00000011946SMARCA410097.706Chinchilla_lanigera
ENSSHAG00000001642SMARCA410097.831ENSCPBG00000009994SMARCA410097.831Chrysemys_picta_bellii
ENSSHAG00000001642SMARCA410098.699ENSCANG00000036013SMARCA410098.699Colobus_angolensis_palliatus
ENSSHAG00000001642SMARCA410098.389ENSCGRG00001016732Smarca410098.389Cricetulus_griseus_chok1gshd
ENSSHAG00000001642SMARCA410098.389ENSCGRG00000017242Smarca410098.389Cricetulus_griseus_crigri
ENSSHAG00000001642SMARCA49687.025ENSCSEG00000014771smarca4a10087.302Cynoglossus_semilaevis
ENSSHAG00000001642SMARCA49987.005ENSCVAG00000006979smarca4a9987.454Cyprinodon_variegatus
ENSSHAG00000001642SMARCA49984.326ENSCVAG00000003018-9884.659Cyprinodon_variegatus
ENSSHAG00000001642SMARCA410087.812ENSDARG00000077226smarca4a10088.178Danio_rerio
ENSSHAG00000001642SMARCA49284.186ENSDARG00000104339SMARCA49584.585Danio_rerio
ENSSHAG00000001642SMARCA410087.269ENSDNOG00000048847SMARCA49398.730Dasypus_novemcinctus
ENSSHAG00000001642SMARCA48590.856ENSDORG00000002544Smarca49191.894Dipodomys_ordii
ENSSHAG00000001642SMARCA49486.028ENSETEG00000013361SMARCA49486.028Echinops_telfairi
ENSSHAG00000001642SMARCA410098.265ENSEASG00005006167SMARCA49898.265Equus_asinus_asinus
ENSSHAG00000001642SMARCA410098.327ENSECAG00000008334SMARCA410098.327Equus_caballus
ENSSHAG00000001642SMARCA410087.091ENSELUG00000010247smarca4a10085.048Esox_lucius
ENSSHAG00000001642SMARCA49978.160ENSELUG00000023232-9384.943Esox_lucius
ENSSHAG00000001642SMARCA410098.330ENSFCAG00000004894SMARCA410098.330Felis_catus
ENSSHAG00000001642SMARCA47497.559ENSFALG00000004208SMARCA49391.339Ficedula_albicollis
ENSSHAG00000001642SMARCA49297.770ENSFDAG00000012237SMARCA49797.770Fukomys_damarensis
ENSSHAG00000001642SMARCA49686.965ENSFHEG00000010182smarca4a10087.181Fundulus_heteroclitus
ENSSHAG00000001642SMARCA410084.100ENSFHEG00000007902-9983.921Fundulus_heteroclitus
ENSSHAG00000001642SMARCA49280.567ENSGMOG00000005756-8779.604Gadus_morhua
ENSSHAG00000001642SMARCA49380.675ENSGMOG00000002649smarca4a8882.374Gadus_morhua
ENSSHAG00000001642SMARCA47397.460ENSGALG00000047145SMARCA410097.460Gallus_gallus
ENSSHAG00000001642SMARCA49981.904ENSGAFG00000008827-9882.132Gambusia_affinis
ENSSHAG00000001642SMARCA49089.318ENSGAFG00000014900smarca4a9988.730Gambusia_affinis
ENSSHAG00000001642SMARCA49980.447ENSGACG00000016033-8183.075Gasterosteus_aculeatus
ENSSHAG00000001642SMARCA49886.160ENSGACG00000006691smarca4a10085.115Gasterosteus_aculeatus
ENSSHAG00000001642SMARCA410097.952ENSGAGG00000016757SMARCA410097.952Gopherus_agassizii
ENSSHAG00000001642SMARCA410098.637ENSGGOG00000009882SMARCA410098.637Gorilla_gorilla
ENSSHAG00000001642SMARCA410087.912ENSHBUG00000021172smarca4a10087.912Haplochromis_burtoni
ENSSHAG00000001642SMARCA410084.053ENSHBUG00000005447-9785.964Haplochromis_burtoni
ENSSHAG00000001642SMARCA410097.656ENSHGLG00000010519SMARCA410097.656Heterocephalus_glaber_female
ENSSHAG00000001642SMARCA410096.663ENSHGLG00100013774SMARCA410096.663Heterocephalus_glaber_male
ENSSHAG00000001642SMARCA49586.778ENSHCOG00000009510smarca4a9687.444Hippocampus_comes
ENSSHAG00000001642SMARCA49884.485ENSIPUG00000016346-8389.323Ictalurus_punctatus
ENSSHAG00000001642SMARCA410088.293ENSIPUG00000006107smarca4a10087.713Ictalurus_punctatus
ENSSHAG00000001642SMARCA410098.451ENSSTOG00000007939SMARCA410098.451Ictidomys_tridecemlineatus
ENSSHAG00000001642SMARCA410096.296ENSJJAG00000012877Smarca410096.296Jaculus_jaculus
ENSSHAG00000001642SMARCA410086.414ENSKMAG00000011931smarca4a10086.736Kryptolebias_marmoratus
ENSSHAG00000001642SMARCA410083.979ENSKMAG00000019518-9887.273Kryptolebias_marmoratus
ENSSHAG00000001642SMARCA49586.086ENSLBEG00000017383smarca4a7789.247Labrus_bergylta
ENSSHAG00000001642SMARCA49583.281ENSLBEG00000020655-8183.281Labrus_bergylta
ENSSHAG00000001642SMARCA45289.008ENSLACG00000015309SMARCA410088.743Latimeria_chalumnae
ENSSHAG00000001642SMARCA410088.381ENSLOCG00000007820smarca4a7992.502Lepisosteus_oculatus
ENSSHAG00000001642SMARCA410098.578ENSLAFG00000001433SMARCA410098.578Loxodonta_africana
ENSSHAG00000001642SMARCA410098.637ENSMFAG00000032146SMARCA49998.637Macaca_fascicularis
ENSSHAG00000001642SMARCA410098.637ENSMMUG00000012042SMARCA410098.637Macaca_mulatta
ENSSHAG00000001642SMARCA410098.451ENSMNEG00000028512SMARCA410098.451Macaca_nemestrina
ENSSHAG00000001642SMARCA410098.575ENSMLEG00000034976SMARCA410098.392Mandrillus_leucophaeus
ENSSHAG00000001642SMARCA49983.323ENSMAMG00000002841-9886.792Mastacembelus_armatus
ENSSHAG00000001642SMARCA410087.439ENSMAMG00000009256smarca4a10087.561Mastacembelus_armatus
ENSSHAG00000001642SMARCA410087.797ENSMZEG00005003889smarca4a10087.858Maylandia_zebra
ENSSHAG00000001642SMARCA49486.307ENSMZEG00005023861-9884.194Maylandia_zebra
ENSSHAG00000001642SMARCA410098.083ENSMAUG00000020731Smarca410098.083Mesocricetus_auratus
ENSSHAG00000001642SMARCA410098.392ENSMICG00000009806SMARCA410098.392Microcebus_murinus
ENSSHAG00000001642SMARCA410098.145ENSMOCG00000022209Smarca410098.145Microtus_ochrogaster
ENSSHAG00000001642SMARCA49981.750ENSMMOG00000008466-9887.423Mola_mola
ENSSHAG00000001642SMARCA49585.687ENSMMOG00000007571smarca4a9886.218Mola_mola
ENSSHAG00000001642SMARCA410097.748ENSMODG00000006287SMARCA410097.748Monodelphis_domestica
ENSSHAG00000001642SMARCA49687.017ENSMALG00000003388smarca4a10087.294Monopterus_albus
ENSSHAG00000001642SMARCA48983.978ENSMALG00000021534-9990.712Monopterus_albus
ENSSHAG00000001642SMARCA410098.388MGP_CAROLIEiJ_G0031879Smarca410098.388Mus_caroli
ENSSHAG00000001642SMARCA410098.388ENSMUSG00000032187Smarca410098.388Mus_musculus
ENSSHAG00000001642SMARCA410097.954MGP_PahariEiJ_G0014745Smarca410097.954Mus_pahari
ENSSHAG00000001642SMARCA410098.388MGP_SPRETEiJ_G0033003Smarca410098.388Mus_spretus
ENSSHAG00000001642SMARCA410098.513ENSMPUG00000005711SMARCA410098.513Mustela_putorius_furo
ENSSHAG00000001642SMARCA410098.451ENSMLUG00000004491-10098.451Myotis_lucifugus
ENSSHAG00000001642SMARCA410097.584ENSNGAG00000021852Smarca410097.584Nannospalax_galili
ENSSHAG00000001642SMARCA48982.471ENSNBRG00000018865-9985.633Neolamprologus_brichardi
ENSSHAG00000001642SMARCA49586.849ENSNBRG00000011457smarca4a9686.996Neolamprologus_brichardi
ENSSHAG00000001642SMARCA410092.684ENSNLEG00000012389SMARCA49892.684Nomascus_leucogenys
ENSSHAG00000001642SMARCA48093.103ENSOPRG00000000885-7793.103Ochotona_princeps
ENSSHAG00000001642SMARCA410094.776ENSODEG00000017127SMARCA48497.235Octodon_degus
ENSSHAG00000001642SMARCA410088.614ENSONIG00000008196smarca4a10088.457Oreochromis_niloticus
ENSSHAG00000001642SMARCA410084.113ENSONIG00000018040-10083.633Oreochromis_niloticus
ENSSHAG00000001642SMARCA49990.280ENSOCUG00000001787SMARCA49990.280Oryctolagus_cuniculus
ENSSHAG00000001642SMARCA49686.303ENSORLG00000015452smarca4a10086.116Oryzias_latipes
ENSSHAG00000001642SMARCA49583.836ENSORLG00000003955-9787.868Oryzias_latipes
ENSSHAG00000001642SMARCA49685.986ENSORLG00020004611smarca4a10086.116Oryzias_latipes_hni
ENSSHAG00000001642SMARCA49583.606ENSORLG00020009728-9983.313Oryzias_latipes_hni
ENSSHAG00000001642SMARCA49983.232ENSORLG00015007739-9983.134Oryzias_latipes_hsok
ENSSHAG00000001642SMARCA49686.113ENSORLG00015016560smarca4a10086.316Oryzias_latipes_hsok
ENSSHAG00000001642SMARCA49683.913ENSOMEG00000016626-9983.713Oryzias_melastigma
ENSSHAG00000001642SMARCA410086.965ENSOMEG00000007486smarca4a10087.592Oryzias_melastigma
ENSSHAG00000001642SMARCA48996.745ENSOGAG00000016148SMARCA410096.745Otolemur_garnettii
ENSSHAG00000001642SMARCA410096.902ENSOARG00000017454SMARCA410096.902Ovis_aries
ENSSHAG00000001642SMARCA410098.637ENSPPAG00000043191SMARCA410098.637Pan_paniscus
ENSSHAG00000001642SMARCA410098.330ENSPPRG00000000064SMARCA410098.330Panthera_pardus
ENSSHAG00000001642SMARCA410098.637ENSPTRG00000010488SMARCA410098.637Pan_troglodytes
ENSSHAG00000001642SMARCA410098.575ENSPANG00000011042SMARCA49998.575Papio_anubis
ENSSHAG00000001642SMARCA410088.307ENSPKIG00000007770SMARCA410088.307Paramormyrops_kingsleyae
ENSSHAG00000001642SMARCA49886.888ENSPKIG00000010087-9887.571Paramormyrops_kingsleyae
ENSSHAG00000001642SMARCA410091.439ENSPSIG00000005547SMARCA410090.650Pelodiscus_sinensis
ENSSHAG00000001642SMARCA410098.145ENSPEMG00000020389Smarca410098.145Peromyscus_maniculatus_bairdii
ENSSHAG00000001642SMARCA410099.690ENSPCIG00000017138SMARCA410099.690Phascolarctos_cinereus
ENSSHAG00000001642SMARCA410083.832ENSPFOG00000007892smarca4a10086.938Poecilia_formosa
ENSSHAG00000001642SMARCA410083.742ENSPFOG00000012930-9982.759Poecilia_formosa
ENSSHAG00000001642SMARCA48290.211ENSPLAG00000018616-8190.513Poecilia_latipinna
ENSSHAG00000001642SMARCA410083.581ENSPLAG00000014294smarca4a10087.044Poecilia_latipinna
ENSSHAG00000001642SMARCA48091.001ENSPMEG00000003725smarca4a9787.844Poecilia_mexicana
ENSSHAG00000001642SMARCA49585.199ENSPMEG00000008929-9884.702Poecilia_mexicana
ENSSHAG00000001642SMARCA49584.664ENSPREG00000014823-9783.521Poecilia_reticulata
ENSSHAG00000001642SMARCA49985.436ENSPREG00000014608smarca4a10086.901Poecilia_reticulata
ENSSHAG00000001642SMARCA410096.600ENSPPYG00000009568SMARCA410096.600Pongo_abelii
ENSSHAG00000001642SMARCA47998.013ENSPCAG00000014054SMARCA47797.351Procavia_capensis
ENSSHAG00000001642SMARCA410098.513ENSPCOG00000023011SMARCA410098.330Propithecus_coquereli
ENSSHAG00000001642SMARCA49697.363ENSPVAG00000007787SMARCA49697.363Pteropus_vampyrus
ENSSHAG00000001642SMARCA49986.558ENSPNYG00000000717smarca4a9688.254Pundamilia_nyererei
ENSSHAG00000001642SMARCA49582.671ENSPNYG00000023995-9785.964Pundamilia_nyererei
ENSSHAG00000001642SMARCA49390.881ENSPNAG00000024136smarca4a8290.502Pygocentrus_nattereri
ENSSHAG00000001642SMARCA49586.504ENSPNAG00000006636-9786.127Pygocentrus_nattereri
ENSSHAG00000001642SMARCA410098.388ENSRNOG00000009271Smarca410098.388Rattus_norvegicus
ENSSHAG00000001642SMARCA410098.637ENSRBIG00000038696SMARCA49998.637Rhinopithecus_bieti
ENSSHAG00000001642SMARCA410098.637ENSRROG00000045509SMARCA410098.637Rhinopithecus_roxellana
ENSSHAG00000001642SMARCA410098.388ENSSBOG00000026896SMARCA49998.447Saimiri_boliviensis_boliviensis
ENSSHAG00000001642SMARCA410089.166ENSSFOG00015013823smarca410088.017Scleropages_formosus
ENSSHAG00000001642SMARCA49190.644ENSSFOG00015009921-9191.006Scleropages_formosus
ENSSHAG00000001642SMARCA410081.970ENSSMAG00000014082-9982.209Scophthalmus_maximus
ENSSHAG00000001642SMARCA49987.704ENSSMAG00000003200smarca4a10086.171Scophthalmus_maximus
ENSSHAG00000001642SMARCA410084.421ENSSDUG00000017298smarca4a10084.388Seriola_dumerili
ENSSHAG00000001642SMARCA49986.032ENSSDUG00000005388-9586.708Seriola_dumerili
ENSSHAG00000001642SMARCA410087.054ENSSLDG00000024486smarca4a10087.010Seriola_lalandi_dorsalis
ENSSHAG00000001642SMARCA49587.484ENSSLDG00000023663-9787.500Seriola_lalandi_dorsalis
ENSSHAG00000001642SMARCA464100.000ENSSARG00000013477SMARCA483100.000Sorex_araneus
ENSSHAG00000001642SMARCA49592.922ENSSPUG00000004558SMARCA49892.866Sphenodon_punctatus
ENSSHAG00000001642SMARCA49987.691ENSSPAG00000012533-9983.294Stegastes_partitus
ENSSHAG00000001642SMARCA410086.812ENSSPAG00000004248smarca4a10086.704Stegastes_partitus
ENSSHAG00000001642SMARCA410098.454ENSSSCG00000013629SMARCA410098.454Sus_scrofa
ENSSHAG00000001642SMARCA45290.036ENSTGUG00000015488-9990.047Taeniopygia_guttata
ENSSHAG00000001642SMARCA48982.128ENSTRUG00000004885smarca4a10081.936Takifugu_rubripes
ENSSHAG00000001642SMARCA49582.722ENSTRUG00000001378SMARCA49882.975Takifugu_rubripes
ENSSHAG00000001642SMARCA47385.765ENSTNIG00000004859-10084.650Tetraodon_nigroviridis
ENSSHAG00000001642SMARCA410083.058ENSTNIG00000004536SMARCA410083.374Tetraodon_nigroviridis
ENSSHAG00000001642SMARCA410094.839ENSTTRG00000009519SMARCA410094.839Tursiops_truncatus
ENSSHAG00000001642SMARCA410098.575ENSUAMG00000014661SMARCA410098.575Ursus_americanus
ENSSHAG00000001642SMARCA410096.466ENSUMAG00000022005SMARCA49998.801Ursus_maritimus
ENSSHAG00000001642SMARCA410098.575ENSVVUG00000017820SMARCA49798.575Vulpes_vulpes
ENSSHAG00000001642SMARCA410087.112ENSXETG00000009355smarca49988.063Xenopus_tropicalis
ENSSHAG00000001642SMARCA49982.873ENSXCOG00000013494-8490.469Xiphophorus_couchianus
ENSSHAG00000001642SMARCA410086.996ENSXMAG00000006321smarca4a10087.256Xiphophorus_maculatus
ENSSHAG00000001642SMARCA410084.454ENSXMAG00000007030-9983.274Xiphophorus_maculatus

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