EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000001657 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1068 bases
Position: chrGL867624.1:14997-16064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001859	RRM_5	PF13893.6	4.5e-10	1	1
ENSSHAP00000001859	RRM_1	PF00076.22	7.4e-61	1	3
ENSSHAP00000001859	RRM_1	PF00076.22	7.4e-61	2	3
ENSSHAP00000001859	RRM_1	PF00076.22	7.4e-61	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001880	-	1068	-	ENSSHAP00000001859	355 (aa)	-	G3VFA5

Gene Model

Click here to download ENSSHAG00000001657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000001657	-	71	38.272	ENSSHAG00000009688	-	55	38.272
ENSSHAG00000001657	-	70	39.506	ENSSHAG00000017438	CELF1	53	39.506
ENSSHAG00000001657	-	62	60.538	ENSSHAG00000005583	ELAVL3	89	63.902
ENSSHAG00000001657	-	94	64.535	ENSSHAG00000013832	-	94	64.535
ENSSHAG00000001657	-	70	38.272	ENSSHAG00000015744	CELF3	56	38.272
ENSSHAG00000001657	-	97	62.536	ENSSHAG00000006756	ELAVL2	99	60.912
ENSSHAG00000001657	-	89	59.434	ENSSHAG00000008109	ELAVL1	94	59.434
ENSSHAG00000001657	-	91	30.263	ENSSHAG00000003431	-	59	30.263
ENSSHAG00000001657	-	79	38.813	ENSSHAG00000002411	RBMS3	52	41.143
ENSSHAG00000001657	-	88	32.051	ENSSHAG00000012508	TIAL1	72	32.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001657	-	94	63.953	ENSG00000162374	ELAVL4	94	63.953	Homo_sapiens
ENSSHAG00000001657	-	97	62.396	ENSAPOG00000020329	elavl4	90	63.663	Acanthochromis_polyacanthus
ENSSHAG00000001657	-	94	62.011	ENSAMEG00000017455	ELAVL4	93	62.011	Ailuropoda_melanoleuca
ENSSHAG00000001657	-	97	62.396	ENSACIG00000008793	elavl4	95	63.953	Amphilophus_citrinellus
ENSSHAG00000001657	-	51	61.081	ENSAOCG00000022907	elavl4	90	61.081	Amphiprion_ocellaris
ENSSHAG00000001657	-	97	62.117	ENSAPEG00000022826	elavl4	88	63.663	Amphiprion_percula
ENSSHAG00000001657	-	97	62.396	ENSATEG00000006136	elavl4	93	63.953	Anabas_testudineus
ENSSHAG00000001657	-	94	62.147	ENSACAG00000004527	ELAVL4	93	62.147	Anolis_carolinensis
ENSSHAG00000001657	-	94	63.663	ENSANAG00000030598	ELAVL4	94	63.663	Aotus_nancymaae
ENSSHAG00000001657	-	97	61.878	ENSACLG00000002786	elavl4	90	63.401	Astatotilapia_calliptera
ENSSHAG00000001657	-	98	63.128	ENSAMXG00000000687	elavl4	91	64.535	Astyanax_mexicanus
ENSSHAG00000001657	-	94	63.663	ENSBTAG00000021046	ELAVL4	96	63.663	Bos_taurus
ENSSHAG00000001657	-	79	59.563	WBGene00001368	exc-7	61	59.563	Caenorhabditis_elegans
ENSSHAG00000001657	-	94	63.663	ENSCJAG00000013725	ELAVL4	94	63.663	Callithrix_jacchus
ENSSHAG00000001657	-	94	63.663	ENSCAFG00000003927	ELAVL4	94	63.663	Canis_familiaris
ENSSHAG00000001657	-	99	60.322	ENSCAFG00020013581	ELAVL4	94	63.663	Canis_lupus_dingo
ENSSHAG00000001657	-	96	63.218	ENSCHIG00000002038	ELAVL4	97	64.118	Capra_hircus
ENSSHAG00000001657	-	92	65.323	ENSTSYG00000004130	ELAVL4	94	64.800	Carlito_syrichta
ENSSHAG00000001657	-	94	49.118	ENSCAPG00000011942	-	95	49.118	Cavia_aperea
ENSSHAG00000001657	-	71	71.429	ENSCAPG00000005993	ELAVL4	100	48.710	Cavia_aperea
ENSSHAG00000001657	-	94	48.105	ENSCPOG00000022816	-	95	48.105	Cavia_porcellus
ENSSHAG00000001657	-	94	63.663	ENSCPOG00000002044	-	94	63.663	Cavia_porcellus
ENSSHAG00000001657	-	94	63.663	ENSCCAG00000024797	ELAVL4	94	63.663	Cebus_capucinus
ENSSHAG00000001657	-	94	63.953	ENSCATG00000029867	ELAVL4	96	62.291	Cercocebus_atys
ENSSHAG00000001657	-	94	63.663	ENSCLAG00000005476	ELAVL4	94	63.663	Chinchilla_lanigera
ENSSHAG00000001657	-	94	63.953	ENSCSAG00000001257	ELAVL4	94	63.953	Chlorocebus_sabaeus
ENSSHAG00000001657	-	94	62.465	ENSCHOG00000002464	ELAVL4	93	62.465	Choloepus_hoffmanni
ENSSHAG00000001657	-	94	64.244	ENSCPBG00000010017	ELAVL4	95	64.244	Chrysemys_picta_bellii
ENSSHAG00000001657	-	90	37.386	ENSCING00000009052	-	96	36.705	Ciona_intestinalis
ENSSHAG00000001657	-	94	63.953	ENSCANG00000043683	ELAVL4	96	63.372	Colobus_angolensis_palliatus
ENSSHAG00000001657	-	94	63.663	ENSCGRG00001020348	Elavl4	94	63.663	Cricetulus_griseus_chok1gshd
ENSSHAG00000001657	-	94	63.663	ENSCGRG00000009162	Elavl4	95	63.081	Cricetulus_griseus_crigri
ENSSHAG00000001657	-	98	60.705	ENSCSEG00000020141	elavl4	90	63.953	Cynoglossus_semilaevis
ENSSHAG00000001657	-	97	61.878	ENSCVAG00000019080	elavl4	92	62.824	Cyprinodon_variegatus
ENSSHAG00000001657	-	94	64.826	ENSDARG00000045639	elavl4	86	63.977	Danio_rerio
ENSSHAG00000001657	-	94	63.663	ENSDNOG00000033502	ELAVL4	93	63.663	Dasypus_novemcinctus
ENSSHAG00000001657	-	94	63.663	ENSDORG00000012729	Elavl4	94	63.663	Dipodomys_ordii
ENSSHAG00000001657	-	94	57.542	ENSETEG00000013779	ELAVL4	95	57.542	Echinops_telfairi
ENSSHAG00000001657	-	94	63.663	ENSEASG00005010728	ELAVL4	94	63.663	Equus_asinus_asinus
ENSSHAG00000001657	-	94	63.663	ENSECAG00000022284	ELAVL4	94	63.663	Equus_caballus
ENSSHAG00000001657	-	94	61.453	ENSEEUG00000008766	ELAVL4	93	61.326	Erinaceus_europaeus
ENSSHAG00000001657	-	94	64.265	ENSELUG00000008025	elavl4	87	63.953	Esox_lucius
ENSSHAG00000001657	-	94	63.663	ENSFCAG00000010438	ELAVL4	94	63.663	Felis_catus
ENSSHAG00000001657	-	94	64.244	ENSFALG00000005331	ELAVL4	93	64.244	Ficedula_albicollis
ENSSHAG00000001657	-	94	63.663	ENSFDAG00000014507	ELAVL4	95	63.081	Fukomys_damarensis
ENSSHAG00000001657	-	97	62.396	ENSFHEG00000004530	elavl4	87	63.953	Fundulus_heteroclitus
ENSSHAG00000001657	-	94	63.953	ENSGMOG00000006515	elavl4	96	63.953	Gadus_morhua
ENSSHAG00000001657	-	94	64.244	ENSGALG00000010533	ELAVL4	94	64.244	Gallus_gallus
ENSSHAG00000001657	-	83	59.223	ENSGAFG00000015956	elavl4	78	60.544	Gambusia_affinis
ENSSHAG00000001657	-	97	62.674	ENSGACG00000011152	elavl4	95	63.663	Gasterosteus_aculeatus
ENSSHAG00000001657	-	94	64.244	ENSGAGG00000018269	ELAVL4	94	63.248	Gopherus_agassizii
ENSSHAG00000001657	-	94	63.953	ENSGGOG00000000634	ELAVL4	96	62.291	Gorilla_gorilla
ENSSHAG00000001657	-	97	62.674	ENSHBUG00000009691	elavl4	90	63.953	Haplochromis_burtoni
ENSSHAG00000001657	-	94	63.372	ENSHGLG00000000485	ELAVL4	96	61.732	Heterocephalus_glaber_female
ENSSHAG00000001657	-	94	63.372	ENSHGLG00100002567	ELAVL4	95	62.791	Heterocephalus_glaber_male
ENSSHAG00000001657	-	97	62.396	ENSHCOG00000002490	elavl4	95	63.953	Hippocampus_comes
ENSSHAG00000001657	-	98	63.408	ENSIPUG00000001381	elavl4	87	64.826	Ictalurus_punctatus
ENSSHAG00000001657	-	94	63.663	ENSSTOG00000027271	ELAVL4	94	63.663	Ictidomys_tridecemlineatus
ENSSHAG00000001657	-	94	63.663	ENSJJAG00000023099	Elavl4	96	62.011	Jaculus_jaculus
ENSSHAG00000001657	-	97	61.878	ENSKMAG00000022289	elavl4	87	63.401	Kryptolebias_marmoratus
ENSSHAG00000001657	-	94	63.112	ENSLBEG00000007096	elavl4	87	60.165	Labrus_bergylta
ENSSHAG00000001657	-	94	64.244	ENSLACG00000008316	ELAVL4	93	64.244	Latimeria_chalumnae
ENSSHAG00000001657	-	94	65.116	ENSLOCG00000009363	elavl4	85	65.116	Lepisosteus_oculatus
ENSSHAG00000001657	-	92	64.777	ENSLAFG00000001087	ELAVL4	100	64.777	Loxodonta_africana
ENSSHAG00000001657	-	94	63.953	ENSMFAG00000039866	ELAVL4	96	62.291	Macaca_fascicularis
ENSSHAG00000001657	-	97	63.610	ENSMMUG00000021933	ELAVL4	95	64.412	Macaca_mulatta
ENSSHAG00000001657	-	94	63.953	ENSMNEG00000035576	ELAVL4	94	63.953	Macaca_nemestrina
ENSSHAG00000001657	-	94	63.953	ENSMLEG00000028616	ELAVL4	94	63.953	Mandrillus_leucophaeus
ENSSHAG00000001657	-	97	62.396	ENSMAMG00000004000	elavl4	93	63.953	Mastacembelus_armatus
ENSSHAG00000001657	-	97	62.674	ENSMZEG00005010690	elavl4	87	63.953	Maylandia_zebra
ENSSHAG00000001657	-	94	64.058	ENSMGAG00000010928	ELAVL4	93	64.058	Meleagris_gallopavo
ENSSHAG00000001657	-	94	63.663	ENSMAUG00000021566	Elavl4	94	63.663	Mesocricetus_auratus
ENSSHAG00000001657	-	94	63.953	ENSMICG00000003286	ELAVL4	96	63.953	Microcebus_murinus
ENSSHAG00000001657	-	94	63.663	ENSMOCG00000010309	Elavl4	96	62.011	Microtus_ochrogaster
ENSSHAG00000001657	-	97	62.396	ENSMMOG00000020264	elavl4	89	63.953	Mola_mola
ENSSHAG00000001657	-	74	57.463	ENSMODG00000001300	-	91	58.238	Monodelphis_domestica
ENSSHAG00000001657	-	100	69.553	ENSMODG00000003850	-	93	72.981	Monodelphis_domestica
ENSSHAG00000001657	-	97	62.674	ENSMALG00000016432	elavl4	90	63.953	Monopterus_albus
ENSSHAG00000001657	-	94	63.663	MGP_CAROLIEiJ_G0026289	Elavl4	94	63.663	Mus_caroli
ENSSHAG00000001657	-	94	63.663	ENSMUSG00000028546	Elavl4	94	63.663	Mus_musculus
ENSSHAG00000001657	-	94	63.663	MGP_PahariEiJ_G0028622	Elavl4	94	63.663	Mus_pahari
ENSSHAG00000001657	-	94	63.663	MGP_SPRETEiJ_G0027258	Elavl4	94	63.663	Mus_spretus
ENSSHAG00000001657	-	94	62.011	ENSMPUG00000007192	ELAVL4	94	62.011	Mustela_putorius_furo
ENSSHAG00000001657	-	94	63.663	ENSMLUG00000006226	ELAVL4	93	63.663	Myotis_lucifugus
ENSSHAG00000001657	-	94	64.244	ENSNGAG00000023123	Elavl4	94	64.244	Nannospalax_galili
ENSSHAG00000001657	-	94	63.953	ENSNLEG00000016303	ELAVL4	96	63.372	Nomascus_leucogenys
ENSSHAG00000001657	-	94	62.465	ENSMEUG00000007145	ELAVL4	95	62.465	Notamacropus_eugenii
ENSSHAG00000001657	-	94	62.011	ENSOPRG00000015300	ELAVL4	93	62.011	Ochotona_princeps
ENSSHAG00000001657	-	94	63.663	ENSODEG00000006770	ELAVL4	95	63.081	Octodon_degus
ENSSHAG00000001657	-	97	62.396	ENSONIG00000002360	elavl4	92	63.953	Oreochromis_niloticus
ENSSHAG00000001657	-	91	64.050	ENSOANG00000007377	ELAVL4	100	64.050	Ornithorhynchus_anatinus
ENSSHAG00000001657	-	94	63.663	ENSOCUG00000016262	ELAVL4	88	63.663	Oryctolagus_cuniculus
ENSSHAG00000001657	-	94	64.535	ENSORLG00000028487	elavl4	87	63.506	Oryzias_latipes
ENSSHAG00000001657	-	94	64.535	ENSORLG00020014277	elavl4	87	64.244	Oryzias_latipes_hni
ENSSHAG00000001657	-	94	64.535	ENSORLG00015010143	elavl4	87	64.244	Oryzias_latipes_hsok
ENSSHAG00000001657	-	97	62.396	ENSOMEG00000009988	elavl4	87	63.401	Oryzias_melastigma
ENSSHAG00000001657	-	94	63.953	ENSOGAG00000016990	ELAVL4	93	63.953	Otolemur_garnettii
ENSSHAG00000001657	-	94	63.663	ENSOARG00000004264	ELAVL4	93	63.663	Ovis_aries
ENSSHAG00000001657	-	94	63.953	ENSPPAG00000042402	ELAVL4	96	62.291	Pan_paniscus
ENSSHAG00000001657	-	94	63.663	ENSPPRG00000002764	ELAVL4	94	63.663	Panthera_pardus
ENSSHAG00000001657	-	94	63.663	ENSPTIG00000016727	ELAVL4	94	63.663	Panthera_tigris_altaica
ENSSHAG00000001657	-	94	63.953	ENSPTRG00000000723	ELAVL4	96	63.372	Pan_troglodytes
ENSSHAG00000001657	-	94	63.953	ENSPANG00000017754	ELAVL4	94	63.953	Papio_anubis
ENSSHAG00000001657	-	96	64.124	ENSPKIG00000006999	elavl4	92	65.116	Paramormyrops_kingsleyae
ENSSHAG00000001657	-	94	64.244	ENSPSIG00000008545	ELAVL4	94	64.244	Pelodiscus_sinensis
ENSSHAG00000001657	-	97	63.231	ENSPMGG00000022175	elavl4	93	64.826	Periophthalmus_magnuspinnatus
ENSSHAG00000001657	-	96	58.640	ENSPEMG00000021058	Elavl3	92	61.310	Peromyscus_maniculatus_bairdii
ENSSHAG00000001657	-	96	67.246	ENSPCIG00000017116	-	96	67.552	Phascolarctos_cinereus
ENSSHAG00000001657	-	97	62.396	ENSPFOG00000004811	elavl4	100	63.393	Poecilia_formosa
ENSSHAG00000001657	-	97	62.396	ENSPLAG00000008085	elavl4	93	63.953	Poecilia_latipinna
ENSSHAG00000001657	-	97	62.674	ENSPMEG00000015619	elavl4	84	63.953	Poecilia_mexicana
ENSSHAG00000001657	-	97	62.674	ENSPREG00000018937	elavl4	90	63.953	Poecilia_reticulata
ENSSHAG00000001657	-	94	63.663	ENSPPYG00000001367	ELAVL4	93	63.663	Pongo_abelii
ENSSHAG00000001657	-	94	62.011	ENSPCAG00000008215	ELAVL4	93	62.011	Procavia_capensis
ENSSHAG00000001657	-	94	63.953	ENSPCOG00000024957	ELAVL4	94	63.953	Propithecus_coquereli
ENSSHAG00000001657	-	78	83.333	ENSPVAG00000003632	ELAVL4	75	83.333	Pteropus_vampyrus
ENSSHAG00000001657	-	97	62.396	ENSPNYG00000021720	elavl4	93	63.953	Pundamilia_nyererei
ENSSHAG00000001657	-	98	63.128	ENSPNAG00000017169	elavl4	91	64.535	Pygocentrus_nattereri
ENSSHAG00000001657	-	94	62.011	ENSRNOG00000023601	Elavl4	93	62.011	Rattus_norvegicus
ENSSHAG00000001657	-	94	63.953	ENSRBIG00000043810	ELAVL4	94	63.953	Rhinopithecus_bieti
ENSSHAG00000001657	-	94	63.953	ENSRROG00000044786	ELAVL4	96	63.372	Rhinopithecus_roxellana
ENSSHAG00000001657	-	94	63.663	ENSSBOG00000022965	ELAVL4	96	63.663	Saimiri_boliviensis_boliviensis
ENSSHAG00000001657	-	94	64.826	ENSSFOG00015015838	elavl4	91	64.826	Scleropages_formosus
ENSSHAG00000001657	-	94	64.244	ENSSMAG00000006881	elavl4	90	63.401	Scophthalmus_maximus
ENSSHAG00000001657	-	97	62.396	ENSSDUG00000000045	elavl4	86	63.953	Seriola_dumerili
ENSSHAG00000001657	-	97	62.674	ENSSLDG00000005260	elavl4	87	63.953	Seriola_lalandi_dorsalis
ENSSHAG00000001657	-	94	62.011	ENSSARG00000010733	ELAVL4	95	62.011	Sorex_araneus
ENSSHAG00000001657	-	94	64.535	ENSSPUG00000011636	ELAVL4	96	64.535	Sphenodon_punctatus
ENSSHAG00000001657	-	97	62.396	ENSSPAG00000018867	elavl4	91	63.953	Stegastes_partitus
ENSSHAG00000001657	-	94	63.663	ENSSSCG00000037291	ELAVL4	93	63.663	Sus_scrofa
ENSSHAG00000001657	-	94	64.244	ENSTGUG00000008597	ELAVL4	95	64.244	Taeniopygia_guttata
ENSSHAG00000001657	-	91	66.055	ENSTRUG00000000523	elavl4	89	66.055	Takifugu_rubripes
ENSSHAG00000001657	-	91	66.055	ENSTNIG00000015485	elavl4	88	66.055	Tetraodon_nigroviridis
ENSSHAG00000001657	-	81	70.339	ENSTBEG00000011730	ELAVL4	69	70.339	Tupaia_belangeri
ENSSHAG00000001657	-	71	77.320	ENSTTRG00000012441	ELAVL4	50	77.320	Tursiops_truncatus
ENSSHAG00000001657	-	94	63.663	ENSUAMG00000013026	ELAVL4	95	63.663	Ursus_americanus
ENSSHAG00000001657	-	94	63.663	ENSUMAG00000023149	ELAVL4	95	63.663	Ursus_maritimus
ENSSHAG00000001657	-	94	62.011	ENSVPAG00000011606	ELAVL4	93	62.011	Vicugna_pacos
ENSSHAG00000001657	-	94	63.663	ENSVVUG00000006175	ELAVL4	94	63.663	Vulpes_vulpes
ENSSHAG00000001657	-	94	58.981	ENSXETG00000008680	elavl4	95	58.981	Xenopus_tropicalis
ENSSHAG00000001657	-	97	62.674	ENSXMAG00000025683	elavl4	90	63.953	Xiphophorus_maculatus