EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000001724 (Gene tree)
Gene ID: 100933268
Gene Symbol: -
Alias: -
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 7634 bases
Position: chrGL834624.1:16406-24039
Accession: 100933268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001937	Nop16	PF09420.10	2.8e-18	1	1
ENSSHAP00000001938	Nop16	PF09420.10	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001959	-	537	-	ENSSHAP00000001938	178 (aa)	XP_003756910	G3VFI4
ENSSHAT00000001958	-	540	-	ENSSHAP00000001937	179 (aa)	-	G3VFI3

Gene Model

Click here to download ENSSHAG00000001724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001724's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001724	-	96	53.529	ENSAPOG00000010682	-	96	53.529	Acanthochromis_polyacanthus
ENSSHAG00000001724	-	100	84.916	ENSAMEG00000006988	-	100	84.916	Ailuropoda_melanoleuca
ENSSHAG00000001724	-	96	56.140	ENSACIG00000019263	nop16	95	56.140	Amphilophus_citrinellus
ENSSHAG00000001724	-	96	54.118	ENSAOCG00000005504	nop16	96	54.118	Amphiprion_ocellaris
ENSSHAG00000001724	-	96	54.118	ENSAPEG00000006605	nop16	96	54.118	Amphiprion_percula
ENSSHAG00000001724	-	96	55.882	ENSATEG00000014089	nop16	95	55.882	Anabas_testudineus
ENSSHAG00000001724	-	99	72.316	ENSACAG00000006333	-	99	72.316	Anolis_carolinensis
ENSSHAG00000001724	-	100	78.771	ENSANAG00000015743	-	100	78.771	Aotus_nancymaae
ENSSHAG00000001724	-	100	73.184	ENSANAG00000027410	-	100	73.184	Aotus_nancymaae
ENSSHAG00000001724	-	96	54.706	ENSACLG00000025227	nop16	95	54.706	Astatotilapia_calliptera
ENSSHAG00000001724	-	94	44.643	ENSAMXG00000006843	nop16	95	44.643	Astyanax_mexicanus
ENSSHAG00000001724	-	100	85.475	ENSBTAG00000010734	NOP16	100	85.475	Bos_taurus
ENSSHAG00000001724	-	100	82.682	ENSCAFG00000016694	NOP16	100	82.682	Canis_familiaris
ENSSHAG00000001724	-	99	82.486	ENSCAFG00020011505	-	94	82.486	Canis_lupus_dingo
ENSSHAG00000001724	-	100	85.475	ENSCHIG00000022082	-	100	85.475	Capra_hircus
ENSSHAG00000001724	-	100	69.274	ENSTSYG00000032690	-	100	69.274	Carlito_syrichta
ENSSHAG00000001724	-	99	80.337	ENSTSYG00000030409	-	99	80.337	Carlito_syrichta
ENSSHAG00000001724	-	100	81.564	ENSCPOG00000026072	-	100	81.564	Cavia_porcellus
ENSSHAG00000001724	-	90	76.398	ENSCCAG00000026775	-	93	76.398	Cebus_capucinus
ENSSHAG00000001724	-	100	81.006	ENSCLAG00000015405	-	100	81.006	Chinchilla_lanigera
ENSSHAG00000001724	-	100	82.682	ENSCSAG00000009400	-	100	82.682	Chlorocebus_sabaeus
ENSSHAG00000001724	-	99	72.626	ENSCPBG00000022647	-	99	72.626	Chrysemys_picta_bellii
ENSSHAG00000001724	-	96	39.429	ENSCING00000006179	-	94	39.429	Ciona_intestinalis
ENSSHAG00000001724	-	95	40.351	ENSCSAVG00000000269	-	93	40.351	Ciona_savignyi
ENSSHAG00000001724	-	100	79.888	ENSCGRG00001004259	Nop16	100	79.888	Cricetulus_griseus_chok1gshd
ENSSHAG00000001724	-	100	79.888	ENSCGRG00000010975	Nop16	100	79.888	Cricetulus_griseus_crigri
ENSSHAG00000001724	-	96	49.123	ENSCSEG00000020523	nop16	97	49.123	Cynoglossus_semilaevis
ENSSHAG00000001724	-	96	56.140	ENSCVAG00000020140	nop16	95	56.140	Cyprinodon_variegatus
ENSSHAG00000001724	-	98	48.295	ENSDARG00000044402	nop16	99	48.295	Danio_rerio
ENSSHAG00000001724	-	100	81.564	ENSDNOG00000042890	-	100	81.564	Dasypus_novemcinctus
ENSSHAG00000001724	-	100	81.564	ENSDORG00000008872	Nop16	100	81.564	Dipodomys_ordii
ENSSHAG00000001724	-	93	42.857	ENSEBUG00000011196	nop16	95	42.857	Eptatretus_burgeri
ENSSHAG00000001724	-	100	83.240	ENSEASG00005011988	-	100	83.240	Equus_asinus_asinus
ENSSHAG00000001724	-	100	84.358	ENSECAG00000021354	NOP16	100	84.358	Equus_caballus
ENSSHAG00000001724	-	98	53.143	ENSELUG00000000401	nop16	98	53.143	Esox_lucius
ENSSHAG00000001724	-	100	83.799	ENSFCAG00000025473	-	100	83.799	Felis_catus
ENSSHAG00000001724	-	100	68.889	ENSFALG00000008553	-	100	68.889	Ficedula_albicollis
ENSSHAG00000001724	-	100	81.564	ENSFDAG00000000193	-	100	81.564	Fukomys_damarensis
ENSSHAG00000001724	-	96	55.294	ENSFHEG00000016452	nop16	95	55.294	Fundulus_heteroclitus
ENSSHAG00000001724	-	100	70.556	ENSGALG00000003355	-	100	70.556	Gallus_gallus
ENSSHAG00000001724	-	83	55.333	ENSGAFG00000011616	nop16	79	55.333	Gambusia_affinis
ENSSHAG00000001724	-	96	51.724	ENSGACG00000003122	-	97	59.483	Gasterosteus_aculeatus
ENSSHAG00000001724	-	96	52.941	ENSGACG00000020819	-	98	52.941	Gasterosteus_aculeatus
ENSSHAG00000001724	-	96	46.784	ENSGACG00000020810	nop16	100	46.784	Gasterosteus_aculeatus
ENSSHAG00000001724	-	96	54.386	ENSGACG00000002618	-	98	54.386	Gasterosteus_aculeatus
ENSSHAG00000001724	-	96	54.118	ENSHBUG00000013527	nop16	95	54.118	Haplochromis_burtoni
ENSSHAG00000001724	-	100	81.006	ENSHGLG00000013437	NOP16	100	81.006	Heterocephalus_glaber_female
ENSSHAG00000001724	-	100	81.006	ENSHGLG00100011375	NOP16	100	81.006	Heterocephalus_glaber_male
ENSSHAG00000001724	-	96	51.176	ENSHCOG00000019999	nop16	97	51.176	Hippocampus_comes
ENSSHAG00000001724	-	94	47.904	ENSIPUG00000006682	nop16	95	47.904	Ictalurus_punctatus
ENSSHAG00000001724	-	100	83.333	ENSSTOG00000004869	-	100	83.333	Ictidomys_tridecemlineatus
ENSSHAG00000001724	-	100	80.447	ENSJJAG00000017655	Nop16	100	80.447	Jaculus_jaculus
ENSSHAG00000001724	-	96	52.941	ENSKMAG00000006164	nop16	95	52.941	Kryptolebias_marmoratus
ENSSHAG00000001724	-	96	54.118	ENSLBEG00000018355	nop16	78	54.118	Labrus_bergylta
ENSSHAG00000001724	-	99	66.854	ENSLACG00000014884	nop16	100	66.854	Latimeria_chalumnae
ENSSHAG00000001724	-	96	59.649	ENSLOCG00000012348	nop16	94	59.649	Lepisosteus_oculatus
ENSSHAG00000001724	-	100	82.682	ENSLAFG00000017886	-	100	82.682	Loxodonta_africana
ENSSHAG00000001724	-	96	57.059	ENSMAMG00000021868	nop16	95	57.059	Mastacembelus_armatus
ENSSHAG00000001724	-	96	54.706	ENSMZEG00005012112	nop16	95	54.706	Maylandia_zebra
ENSSHAG00000001724	-	55	72.449	ENSMGAG00000004726	-	96	72.449	Meleagris_gallopavo
ENSSHAG00000001724	-	60	82.243	ENSMAUG00000009852	-	100	82.243	Mesocricetus_auratus
ENSSHAG00000001724	-	94	73.373	ENSMAUG00000015569	-	99	73.373	Mesocricetus_auratus
ENSSHAG00000001724	-	100	80.447	ENSMOCG00000020788	Nop16	100	80.447	Microtus_ochrogaster
ENSSHAG00000001724	-	96	55.294	ENSMMOG00000016054	nop16	99	55.294	Mola_mola
ENSSHAG00000001724	-	100	92.737	ENSMODG00000005214	-	100	92.737	Monodelphis_domestica
ENSSHAG00000001724	-	96	54.706	ENSMALG00000021263	nop16	95	54.706	Monopterus_albus
ENSSHAG00000001724	-	100	81.006	MGP_CAROLIEiJ_G0018538	Nop16	100	81.006	Mus_caroli
ENSSHAG00000001724	-	100	81.564	ENSMUSG00000025869	Nop16	100	81.564	Mus_musculus
ENSSHAG00000001724	-	100	80.447	MGP_PahariEiJ_G0019603	Nop16	100	80.447	Mus_pahari
ENSSHAG00000001724	-	100	81.564	MGP_SPRETEiJ_G0019418	Nop16	100	81.564	Mus_spretus
ENSSHAG00000001724	-	100	84.916	ENSMPUG00000012552	-	100	84.916	Mustela_putorius_furo
ENSSHAG00000001724	-	100	81.564	ENSMPUG00000016964	-	100	81.564	Mustela_putorius_furo
ENSSHAG00000001724	-	99	80.337	ENSMLUG00000003504	-	99	80.337	Myotis_lucifugus
ENSSHAG00000001724	-	100	81.006	ENSNGAG00000018045	Nop16	100	81.006	Nannospalax_galili
ENSSHAG00000001724	-	96	53.529	ENSNBRG00000015181	nop16	96	53.529	Neolamprologus_brichardi
ENSSHAG00000001724	-	100	81.006	ENSODEG00000009586	-	100	81.006	Octodon_degus
ENSSHAG00000001724	-	96	56.471	ENSONIG00000016417	nop16	95	56.471	Oreochromis_niloticus
ENSSHAG00000001724	-	100	82.682	ENSOCUG00000013171	-	100	82.682	Oryctolagus_cuniculus
ENSSHAG00000001724	-	96	56.395	ENSORLG00000026611	nop16	95	56.395	Oryzias_latipes
ENSSHAG00000001724	-	96	59.064	ENSOMEG00000023001	nop16	95	59.064	Oryzias_melastigma
ENSSHAG00000001724	-	100	83.240	ENSOGAG00000000824	-	100	83.240	Otolemur_garnettii
ENSSHAG00000001724	-	100	85.475	ENSOARG00000002165	-	100	85.475	Ovis_aries
ENSSHAG00000001724	-	100	83.240	ENSPPAG00000035473	-	100	83.240	Pan_paniscus
ENSSHAG00000001724	-	100	83.799	ENSPPRG00000016600	-	100	83.799	Panthera_pardus
ENSSHAG00000001724	-	100	83.240	ENSPTIG00000011708	-	100	83.240	Panthera_tigris_altaica
ENSSHAG00000001724	-	100	83.240	ENSPTRG00000017560	NOP16	100	83.240	Pan_troglodytes
ENSSHAG00000001724	-	99	50.562	ENSPKIG00000009587	nop16	99	50.562	Paramormyrops_kingsleyae
ENSSHAG00000001724	-	79	65.493	ENSPSIG00000013546	-	99	65.493	Pelodiscus_sinensis
ENSSHAG00000001724	-	94	57.396	ENSPMGG00000003443	nop16	98	57.396	Periophthalmus_magnuspinnatus
ENSSHAG00000001724	-	100	80.447	ENSPEMG00000020268	Nop16	100	80.447	Peromyscus_maniculatus_bairdii
ENSSHAG00000001724	-	100	94.413	ENSPCIG00000009782	-	100	94.413	Phascolarctos_cinereus
ENSSHAG00000001724	-	96	54.386	ENSPFOG00000010549	nop16	95	54.386	Poecilia_formosa
ENSSHAG00000001724	-	77	54.348	ENSPLAG00000007124	nop16	70	54.348	Poecilia_latipinna
ENSSHAG00000001724	-	96	54.971	ENSPMEG00000008611	nop16	95	54.971	Poecilia_mexicana
ENSSHAG00000001724	-	96	54.971	ENSPREG00000012940	nop16	95	54.971	Poecilia_reticulata
ENSSHAG00000001724	-	99	82.022	ENSPPYG00000016070	-	99	82.022	Pongo_abelii
ENSSHAG00000001724	-	96	54.706	ENSPNYG00000013529	nop16	95	54.706	Pundamilia_nyererei
ENSSHAG00000001724	-	93	46.988	ENSPNAG00000016233	nop16	95	46.988	Pygocentrus_nattereri
ENSSHAG00000001724	-	100	80.447	ENSRNOG00000017284	Nop16	100	80.447	Rattus_norvegicus
ENSSHAG00000001724	-	90	53.416	ENSSFOG00015010537	nop16	77	52.601	Scleropages_formosus
ENSSHAG00000001724	-	96	55.882	ENSSDUG00000022349	nop16	95	55.882	Seriola_dumerili
ENSSHAG00000001724	-	96	56.471	ENSSLDG00000025171	nop16	95	56.471	Seriola_lalandi_dorsalis
ENSSHAG00000001724	-	81	60.526	ENSSARG00000006699	-	71	60.526	Sorex_araneus
ENSSHAG00000001724	-	99	70.621	ENSSPUG00000006508	-	98	70.621	Sphenodon_punctatus
ENSSHAG00000001724	-	96	54.118	ENSSPAG00000011772	nop16	95	54.118	Stegastes_partitus
ENSSHAG00000001724	-	100	82.123	ENSSSCG00000029577	-	100	82.123	Sus_scrofa
ENSSHAG00000001724	-	100	72.778	ENSTGUG00000000543	-	100	72.778	Taeniopygia_guttata
ENSSHAG00000001724	-	96	54.386	ENSTRUG00000020255	nop16	95	54.386	Takifugu_rubripes
ENSSHAG00000001724	-	96	54.971	ENSTNIG00000007616	nop16	95	54.971	Tetraodon_nigroviridis
ENSSHAG00000001724	-	100	84.358	ENSUAMG00000005139	-	100	84.358	Ursus_americanus
ENSSHAG00000001724	-	99	83.051	ENSVVUG00000001697	-	94	83.051	Vulpes_vulpes
ENSSHAG00000001724	-	92	52.147	ENSXETG00000022342	nop16	95	52.147	Xenopus_tropicalis
ENSSHAG00000001724	-	96	56.140	ENSXCOG00000018829	nop16	97	56.140	Xiphophorus_couchianus
ENSSHAG00000001724	-	96	56.725	ENSXMAG00000029113	nop16	95	56.725	Xiphophorus_maculatus