EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000001758 (Gene tree)
Gene ID: 100914213
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 24926 bases
Position: chrGL856981.1:17175-42100
Accession: 100914213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000001974	RTC	PF01137.21	5.9e-89	1	1
ENSSHAP00000001974	RTC_insert	PF05189.13	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000001995	RTCA-201	3288	-	ENSSHAP00000001974	366 (aa)	XP_003769740	G3VFM0

Gene Model

Click here to download ENSSHAG00000001758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001758	RTCA	100	90.164	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSSHAG00000001758	RTCA	99	71.191	ENSAPOG00000001345	rtca	98	71.191	Acanthochromis_polyacanthus
ENSSHAG00000001758	RTCA	73	89.963	ENSAMEG00000008855	RTCA	100	89.963	Ailuropoda_melanoleuca
ENSSHAG00000001758	RTCA	99	71.468	ENSACIG00000019643	rtca	99	71.468	Amphilophus_citrinellus
ENSSHAG00000001758	RTCA	100	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSSHAG00000001758	RTCA	100	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSSHAG00000001758	RTCA	100	69.399	ENSATEG00000006315	rtca	100	69.399	Anabas_testudineus
ENSSHAG00000001758	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSSHAG00000001758	RTCA	100	90.164	ENSANAG00000025446	RTCA	100	90.164	Aotus_nancymaae
ENSSHAG00000001758	RTCA	100	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSSHAG00000001758	RTCA	100	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSSHAG00000001758	RTCA	100	92.077	ENSBTAG00000006321	RTCA	100	92.077	Bos_taurus
ENSSHAG00000001758	RTCA	100	89.891	ENSCJAG00000003398	RTCA	100	89.891	Callithrix_jacchus
ENSSHAG00000001758	RTCA	100	91.803	ENSCAFG00000020010	RTCA	68	91.803	Canis_familiaris
ENSSHAG00000001758	RTCA	100	91.803	ENSCAFG00020011528	RTCA	57	91.803	Canis_lupus_dingo
ENSSHAG00000001758	RTCA	100	91.803	ENSCHIG00000018937	RTCA	100	91.803	Capra_hircus
ENSSHAG00000001758	RTCA	100	90.710	ENSTSYG00000011305	RTCA	100	90.710	Carlito_syrichta
ENSSHAG00000001758	RTCA	100	90.164	ENSCCAG00000021844	RTCA	100	90.164	Cebus_capucinus
ENSSHAG00000001758	RTCA	100	87.071	ENSCATG00000019364	RTCA	100	89.320	Cercocebus_atys
ENSSHAG00000001758	RTCA	87	89.590	ENSCLAG00000006125	RTCA	100	89.590	Chinchilla_lanigera
ENSSHAG00000001758	RTCA	100	90.437	ENSCSAG00000001509	RTCA	100	90.437	Chlorocebus_sabaeus
ENSSHAG00000001758	RTCA	100	91.257	ENSCHOG00000005211	RTCA	100	91.257	Choloepus_hoffmanni
ENSSHAG00000001758	RTCA	100	85.792	ENSCPBG00000026658	RTCA	100	85.792	Chrysemys_picta_bellii
ENSSHAG00000001758	RTCA	98	56.944	ENSCING00000007875	-	98	56.944	Ciona_intestinalis
ENSSHAG00000001758	RTCA	98	56.389	ENSCSAVG00000007269	-	98	56.389	Ciona_savignyi
ENSSHAG00000001758	RTCA	100	90.164	ENSCANG00000040106	RTCA	100	90.164	Colobus_angolensis_palliatus
ENSSHAG00000001758	RTCA	73	87.732	ENSCGRG00001013163	Rtca	85	87.732	Cricetulus_griseus_chok1gshd
ENSSHAG00000001758	RTCA	98	69.167	ENSCSEG00000000530	rtca	96	69.167	Cynoglossus_semilaevis
ENSSHAG00000001758	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSSHAG00000001758	RTCA	100	72.678	ENSDARG00000002215	rtca	100	72.678	Danio_rerio
ENSSHAG00000001758	RTCA	100	90.984	ENSDNOG00000000456	RTCA	100	90.984	Dasypus_novemcinctus
ENSSHAG00000001758	RTCA	100	89.344	ENSDORG00000005448	Rtca	100	89.344	Dipodomys_ordii
ENSSHAG00000001758	RTCA	99	40.055	FBgn0025630	Rtca	99	40.055	Drosophila_melanogaster
ENSSHAG00000001758	RTCA	95	57.627	ENSEBUG00000008556	rtca	97	57.627	Eptatretus_burgeri
ENSSHAG00000001758	RTCA	100	92.350	ENSEASG00005015926	RTCA	100	92.350	Equus_asinus_asinus
ENSSHAG00000001758	RTCA	100	92.350	ENSECAG00000019831	RTCA	100	92.350	Equus_caballus
ENSSHAG00000001758	RTCA	91	81.503	ENSEEUG00000001165	RTCA	100	81.503	Erinaceus_europaeus
ENSSHAG00000001758	RTCA	99	71.468	ENSELUG00000003741	rtca	99	71.468	Esox_lucius
ENSSHAG00000001758	RTCA	100	92.623	ENSFCAG00000024460	RTCA	100	92.623	Felis_catus
ENSSHAG00000001758	RTCA	93	82.353	ENSFALG00000002443	RTCA	91	82.353	Ficedula_albicollis
ENSSHAG00000001758	RTCA	98	70.442	ENSFDAG00000016084	-	100	70.442	Fukomys_damarensis
ENSSHAG00000001758	RTCA	100	90.710	ENSFDAG00000012070	-	100	90.710	Fukomys_damarensis
ENSSHAG00000001758	RTCA	67	61.538	ENSFHEG00000002868	rtca	90	68.571	Fundulus_heteroclitus
ENSSHAG00000001758	RTCA	100	69.399	ENSGMOG00000013264	rtca	100	69.399	Gadus_morhua
ENSSHAG00000001758	RTCA	100	82.240	ENSGALG00000005277	RTCA	100	82.240	Gallus_gallus
ENSSHAG00000001758	RTCA	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSSHAG00000001758	RTCA	100	69.672	ENSGACG00000013497	rtca	100	69.672	Gasterosteus_aculeatus
ENSSHAG00000001758	RTCA	80	87.031	ENSGAGG00000023306	RTCA	100	87.031	Gopherus_agassizii
ENSSHAG00000001758	RTCA	100	89.617	ENSGGOG00000044018	-	100	89.617	Gorilla_gorilla
ENSSHAG00000001758	RTCA	100	90.164	ENSGGOG00000009546	-	100	90.164	Gorilla_gorilla
ENSSHAG00000001758	RTCA	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSSHAG00000001758	RTCA	100	89.344	ENSHGLG00000002617	RTCA	100	89.344	Heterocephalus_glaber_female
ENSSHAG00000001758	RTCA	100	89.344	ENSHGLG00100006056	RTCA	100	89.344	Heterocephalus_glaber_male
ENSSHAG00000001758	RTCA	100	64.208	ENSHCOG00000020628	rtca	88	64.820	Hippocampus_comes
ENSSHAG00000001758	RTCA	100	72.951	ENSIPUG00000024803	rtca	100	72.951	Ictalurus_punctatus
ENSSHAG00000001758	RTCA	100	83.880	ENSSTOG00000013528	-	100	83.880	Ictidomys_tridecemlineatus
ENSSHAG00000001758	RTCA	100	79.292	ENSSTOG00000033099	-	100	79.292	Ictidomys_tridecemlineatus
ENSSHAG00000001758	RTCA	100	64.754	ENSJJAG00000016178	Rtca	100	64.754	Jaculus_jaculus
ENSSHAG00000001758	RTCA	99	72.299	ENSKMAG00000006651	rtca	98	72.299	Kryptolebias_marmoratus
ENSSHAG00000001758	RTCA	99	70.360	ENSLBEG00000028971	rtca	99	70.360	Labrus_bergylta
ENSSHAG00000001758	RTCA	88	69.782	ENSLBEG00000002448	-	99	69.782	Labrus_bergylta
ENSSHAG00000001758	RTCA	100	78.689	ENSLACG00000013666	RTCA	100	78.689	Latimeria_chalumnae
ENSSHAG00000001758	RTCA	100	74.317	ENSLOCG00000000093	rtca	99	74.317	Lepisosteus_oculatus
ENSSHAG00000001758	RTCA	100	91.257	ENSLAFG00000001473	RTCA	100	91.257	Loxodonta_africana
ENSSHAG00000001758	RTCA	100	90.437	ENSMFAG00000034132	RTCA	100	90.437	Macaca_fascicularis
ENSSHAG00000001758	RTCA	100	89.891	ENSMMUG00000019105	RTCA	100	89.891	Macaca_mulatta
ENSSHAG00000001758	RTCA	84	89.644	ENSMNEG00000037163	RTCA	100	89.644	Macaca_nemestrina
ENSSHAG00000001758	RTCA	100	74.317	ENSMLEG00000042151	RTCA	100	74.317	Mandrillus_leucophaeus
ENSSHAG00000001758	RTCA	100	71.858	ENSMAMG00000016536	rtca	100	71.858	Mastacembelus_armatus
ENSSHAG00000001758	RTCA	100	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSSHAG00000001758	RTCA	87	80.564	ENSMGAG00000006892	RTCA	99	80.564	Meleagris_gallopavo
ENSSHAG00000001758	RTCA	100	88.798	ENSMAUG00000008488	Rtca	100	88.798	Mesocricetus_auratus
ENSSHAG00000001758	RTCA	84	91.262	ENSMICG00000008643	RTCA	100	91.262	Microcebus_murinus
ENSSHAG00000001758	RTCA	100	89.617	ENSMOCG00000016660	Rtca	100	89.617	Microtus_ochrogaster
ENSSHAG00000001758	RTCA	84	70.874	ENSMMOG00000007750	rtca	100	70.874	Mola_mola
ENSSHAG00000001758	RTCA	100	97.268	ENSMODG00000003557	RTCA	100	97.268	Monodelphis_domestica
ENSSHAG00000001758	RTCA	100	72.131	ENSMALG00000020844	rtca	100	72.131	Monopterus_albus
ENSSHAG00000001758	RTCA	100	88.251	MGP_CAROLIEiJ_G0025565	Rtca	100	88.251	Mus_caroli
ENSSHAG00000001758	RTCA	100	87.705	ENSMUSG00000000339	Rtca	92	95.833	Mus_musculus
ENSSHAG00000001758	RTCA	100	87.978	MGP_PahariEiJ_G0027011	Rtca	100	87.978	Mus_pahari
ENSSHAG00000001758	RTCA	100	87.978	MGP_SPRETEiJ_G0026515	Rtca	100	87.978	Mus_spretus
ENSSHAG00000001758	RTCA	100	92.350	ENSMPUG00000012119	RTCA	100	92.350	Mustela_putorius_furo
ENSSHAG00000001758	RTCA	100	85.286	ENSMLUG00000009922	RTCA	100	85.286	Myotis_lucifugus
ENSSHAG00000001758	RTCA	100	88.798	ENSNGAG00000011540	Rtca	99	88.798	Nannospalax_galili
ENSSHAG00000001758	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSSHAG00000001758	RTCA	100	90.437	ENSNLEG00000031426	RTCA	100	90.437	Nomascus_leucogenys
ENSSHAG00000001758	RTCA	76	81.818	ENSMEUG00000010030	-	77	81.818	Notamacropus_eugenii
ENSSHAG00000001758	RTCA	73	85.502	ENSOPRG00000012092	RTCA	71	85.502	Ochotona_princeps
ENSSHAG00000001758	RTCA	95	90.230	ENSODEG00000006990	RTCA	96	90.313	Octodon_degus
ENSSHAG00000001758	RTCA	100	70.219	ENSONIG00000007753	rtca	99	70.219	Oreochromis_niloticus
ENSSHAG00000001758	RTCA	87	90.221	ENSOANG00000012055	RTCA	98	90.221	Ornithorhynchus_anatinus
ENSSHAG00000001758	RTCA	100	92.077	ENSOCUG00000014247	RTCA	100	92.077	Oryctolagus_cuniculus
ENSSHAG00000001758	RTCA	100	71.311	ENSORLG00000013605	rtca	100	71.311	Oryzias_latipes
ENSSHAG00000001758	RTCA	100	71.311	ENSORLG00020001904	rtca	100	71.311	Oryzias_latipes_hni
ENSSHAG00000001758	RTCA	100	71.311	ENSORLG00015021064	rtca	100	71.311	Oryzias_latipes_hsok
ENSSHAG00000001758	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSSHAG00000001758	RTCA	100	81.694	ENSOGAG00000005627	RTCA	100	81.694	Otolemur_garnettii
ENSSHAG00000001758	RTCA	87	90.566	ENSOARG00000018122	RTCA	100	90.566	Ovis_aries
ENSSHAG00000001758	RTCA	100	87.335	ENSPPAG00000035119	RTCA	100	89.968	Pan_paniscus
ENSSHAG00000001758	RTCA	100	92.350	ENSPPRG00000000350	RTCA	100	92.350	Panthera_pardus
ENSSHAG00000001758	RTCA	100	92.350	ENSPTIG00000012816	RTCA	100	92.350	Panthera_tigris_altaica
ENSSHAG00000001758	RTCA	100	86.807	ENSPTRG00000001004	RTCA	100	89.320	Pan_troglodytes
ENSSHAG00000001758	RTCA	100	90.437	ENSPANG00000000346	RTCA	100	90.437	Papio_anubis
ENSSHAG00000001758	RTCA	100	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSSHAG00000001758	RTCA	100	86.066	ENSPSIG00000011408	RTCA	100	86.066	Pelodiscus_sinensis
ENSSHAG00000001758	RTCA	100	89.344	ENSPEMG00000018582	Rtca	100	89.344	Peromyscus_maniculatus_bairdii
ENSSHAG00000001758	RTCA	100	57.766	ENSPMAG00000009110	rtca	100	57.766	Petromyzon_marinus
ENSSHAG00000001758	RTCA	100	97.541	ENSPCIG00000007684	RTCA	100	97.541	Phascolarctos_cinereus
ENSSHAG00000001758	RTCA	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSSHAG00000001758	RTCA	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSSHAG00000001758	RTCA	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSSHAG00000001758	RTCA	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSSHAG00000001758	RTCA	100	90.164	ENSPPYG00000001115	RTCA	100	90.164	Pongo_abelii
ENSSHAG00000001758	RTCA	100	87.432	ENSPCAG00000005076	RTCA	100	87.432	Procavia_capensis
ENSSHAG00000001758	RTCA	100	91.803	ENSPCOG00000005603	RTCA	100	91.803	Propithecus_coquereli
ENSSHAG00000001758	RTCA	100	87.599	ENSPVAG00000009478	RTCA	100	87.599	Pteropus_vampyrus
ENSSHAG00000001758	RTCA	100	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSSHAG00000001758	RTCA	100	73.497	ENSPNAG00000022270	rtca	100	73.497	Pygocentrus_nattereri
ENSSHAG00000001758	RTCA	100	88.798	ENSRNOG00000014575	Rtca	100	88.798	Rattus_norvegicus
ENSSHAG00000001758	RTCA	100	86.807	ENSRBIG00000041180	RTCA	100	88.997	Rhinopithecus_bieti
ENSSHAG00000001758	RTCA	100	89.891	ENSRROG00000024929	RTCA	100	89.891	Rhinopithecus_roxellana
ENSSHAG00000001758	RTCA	100	89.071	ENSSBOG00000028626	RTCA	100	89.071	Saimiri_boliviensis_boliviensis
ENSSHAG00000001758	RTCA	98	68.611	ENSSMAG00000014680	rtca	97	68.611	Scophthalmus_maximus
ENSSHAG00000001758	RTCA	98	71.111	ENSSDUG00000015585	rtca	97	71.111	Seriola_dumerili
ENSSHAG00000001758	RTCA	96	71.225	ENSSLDG00000018985	rtca	95	71.225	Seriola_lalandi_dorsalis
ENSSHAG00000001758	RTCA	87	84.543	ENSSARG00000013993	RTCA	100	84.543	Sorex_araneus
ENSSHAG00000001758	RTCA	100	70.219	ENSSPAG00000011938	rtca	99	70.219	Stegastes_partitus
ENSSHAG00000001758	RTCA	100	91.803	ENSSSCG00000006865	RTCA	100	91.803	Sus_scrofa
ENSSHAG00000001758	RTCA	100	83.060	ENSTGUG00000005154	RTCA	100	83.060	Taeniopygia_guttata
ENSSHAG00000001758	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSSHAG00000001758	RTCA	100	71.311	ENSTNIG00000004725	rtca	100	71.311	Tetraodon_nigroviridis
ENSSHAG00000001758	RTCA	59	81.818	ENSTBEG00000000943	RTCA	82	63.866	Tupaia_belangeri
ENSSHAG00000001758	RTCA	100	87.599	ENSTTRG00000015327	RTCA	100	87.599	Tursiops_truncatus
ENSSHAG00000001758	RTCA	94	90.087	ENSUAMG00000017265	RTCA	96	90.087	Ursus_americanus
ENSSHAG00000001758	RTCA	100	91.257	ENSUMAG00000007881	RTCA	100	91.257	Ursus_maritimus
ENSSHAG00000001758	RTCA	87	81.388	ENSVPAG00000001039	RTCA	84	81.388	Vicugna_pacos
ENSSHAG00000001758	RTCA	100	91.530	ENSVVUG00000022041	RTCA	68	91.530	Vulpes_vulpes
ENSSHAG00000001758	RTCA	99	65.753	ENSXETG00000031661	RTCA	99	65.753	Xenopus_tropicalis
ENSSHAG00000001758	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSSHAG00000001758	RTCA	100	71.585	ENSXMAG00000005482	rtca	99	71.585	Xiphophorus_maculatus