EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000001847 (Gene tree)
Gene ID: 100920126
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 23997 bases
Position: chrGL856908.1:18391-42387
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002076	KH_1	PF00013.29	3.1e-12	1	1
ENSSHAP00000002076	DEAD	PF00270.29	2.2e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002099	-	1926	-	ENSSHAP00000002076	641 (aa)	-	G3VFX2

Gene Model

Click here to download ENSSHAG00000001847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000001847	-	60	33.842	ENSSHAG00000010825	DDX47	75	33.756
ENSSHAG00000001847	-	68	42.921	ENSSHAG00000012772	DDX5	65	42.060
ENSSHAG00000001847	-	59	31.202	ENSSHAG00000013962	DDX52	62	31.202
ENSSHAG00000001847	-	57	31.319	ENSSHAG00000005751	-	83	32.184
ENSSHAG00000001847	-	60	37.531	ENSSHAG00000011574	-	63	37.531
ENSSHAG00000001847	-	59	38.107	ENSSHAG00000009132	DDX4	54	38.107
ENSSHAG00000001847	-	67	33.710	ENSSHAG00000014005	-	68	33.710
ENSSHAG00000001847	-	57	35.121	ENSSHAG00000010982	DDX49	71	35.121
ENSSHAG00000001847	-	55	35.813	ENSSHAG00000005690	DDX50	50	35.813
ENSSHAG00000001847	-	52	30.769	ENSSHAG00000017081	EIF4A2	98	31.065
ENSSHAG00000001847	-	59	43.077	ENSSHAG00000009060	DDX24	51	43.077
ENSSHAG00000001847	-	61	32.187	ENSSHAG00000018781	DDX18	63	32.187
ENSSHAG00000001847	-	68	44.866	ENSSHAG00000004578	DDX17	69	44.866
ENSSHAG00000001847	-	51	30.702	ENSSHAG00000015820	DDX55	60	30.702
ENSSHAG00000001847	-	57	31.319	ENSSHAG00000004638	-	80	31.319
ENSSHAG00000001847	-	58	30.971	ENSSHAG00000015756	EIF4A1	91	30.871
ENSSHAG00000001847	-	54	31.700	ENSSHAG00000008417	-	99	31.700
ENSSHAG00000001847	-	59	39.340	ENSSHAG00000007623	-	60	38.765
ENSSHAG00000001847	-	53	31.232	ENSSHAG00000002011	DDX25	74	30.874
ENSSHAG00000001847	-	54	33.815	ENSSHAG00000011424	DDX6	75	33.154
ENSSHAG00000001847	-	60	40.338	ENSSHAG00000006590	DDX23	50	40.338
ENSSHAG00000001847	-	89	74.390	ENSSHAG00000016933	-	98	74.390
ENSSHAG00000001847	-	63	35.507	ENSSHAG00000014781	DDX59	65	35.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001847	-	93	57.704	ENSAPOG00000001712	ddx43	80	61.111	Acanthochromis_polyacanthus
ENSSHAG00000001847	-	72	62.151	ENSACIG00000012170	ddx43	73	62.151	Amphilophus_citrinellus
ENSSHAG00000001847	-	93	60.098	ENSAOCG00000001331	ddx43	83	61.695	Amphiprion_ocellaris
ENSSHAG00000001847	-	93	60.691	ENSAPEG00000001133	ddx43	82	62.393	Amphiprion_percula
ENSSHAG00000001847	-	88	62.172	ENSATEG00000012664	ddx43	82	62.172	Anabas_testudineus
ENSSHAG00000001847	-	87	68.036	ENSAPLG00000010182	-	99	73.486	Anas_platyrhynchos
ENSSHAG00000001847	-	92	65.651	ENSACAG00000004387	-	91	65.651	Anolis_carolinensis
ENSSHAG00000001847	-	94	60.196	ENSACLG00000026081	ddx43	84	62.093	Astatotilapia_calliptera
ENSSHAG00000001847	-	88	63.009	ENSAMXG00000004457	ddx43	81	59.216	Astyanax_mexicanus
ENSSHAG00000001847	-	72	47.134	WBGene00013214	Y54G11A.3	93	47.134	Caenorhabditis_elegans
ENSSHAG00000001847	-	53	48.538	ENSCSEG00000000532	ddx43	77	51.780	Cynoglossus_semilaevis
ENSSHAG00000001847	-	84	52.468	ENSCVAG00000009980	ddx43	78	53.981	Cyprinodon_variegatus
ENSSHAG00000001847	-	93	60.855	ENSDARG00000022614	ddx43	81	62.478	Danio_rerio
ENSSHAG00000001847	-	94	46.741	FBgn0037549	CG7878	84	47.993	Drosophila_melanogaster
ENSSHAG00000001847	-	79	48.126	ENSETEG00000014626	-	97	47.490	Echinops_telfairi
ENSSHAG00000001847	-	66	48.988	ENSETEG00000019547	-	69	47.674	Echinops_telfairi
ENSSHAG00000001847	-	93	61.614	ENSELUG00000012126	ddx43	85	63.972	Esox_lucius
ENSSHAG00000001847	-	95	65.902	ENSFALG00000007042	-	85	68.301	Ficedula_albicollis
ENSSHAG00000001847	-	72	67.957	ENSFHEG00000011226	ddx43	86	67.647	Fundulus_heteroclitus
ENSSHAG00000001847	-	69	65.306	ENSGMOG00000004178	ddx43	96	65.158	Gadus_morhua
ENSSHAG00000001847	-	68	74.828	ENSGALG00000015928	-	99	74.828	Gallus_gallus
ENSSHAG00000001847	-	88	59.585	ENSGAFG00000012622	ddx43	82	59.585	Gambusia_affinis
ENSSHAG00000001847	-	87	58.392	ENSGACG00000012072	ddx43	99	58.348	Gasterosteus_aculeatus
ENSSHAG00000001847	-	99	60.597	ENSGAGG00000025230	-	86	64.538	Gopherus_agassizii
ENSSHAG00000001847	-	88	62.653	ENSHBUG00000011653	ddx43	84	62.264	Haplochromis_burtoni
ENSSHAG00000001847	-	93	56.126	ENSHCOG00000014704	ddx43	85	58.865	Hippocampus_comes
ENSSHAG00000001847	-	89	61.979	ENSIPUG00000023423	ddx43	84	61.979	Ictalurus_punctatus
ENSSHAG00000001847	-	88	61.913	ENSKMAG00000016167	ddx43	84	61.709	Kryptolebias_marmoratus
ENSSHAG00000001847	-	88	60.670	ENSLBEG00000007913	ddx43	82	60.174	Labrus_bergylta
ENSSHAG00000001847	-	75	66.940	ENSLACG00000000741	ddx43	100	66.940	Latimeria_chalumnae
ENSSHAG00000001847	-	92	62.309	ENSLOCG00000016170	ddx43	87	62.245	Lepisosteus_oculatus
ENSSHAG00000001847	-	82	61.132	ENSMAMG00000022128	ddx43	78	60.628	Mastacembelus_armatus
ENSSHAG00000001847	-	94	60.196	ENSMZEG00005027349	ddx43	84	62.093	Maylandia_zebra
ENSSHAG00000001847	-	90	67.128	ENSMGAG00000013832	-	99	67.128	Meleagris_gallopavo
ENSSHAG00000001847	-	94	57.496	ENSMMOG00000007346	ddx43	83	60.424	Mola_mola
ENSSHAG00000001847	-	92	67.572	ENSMODG00000014335	-	98	68.103	Monodelphis_domestica
ENSSHAG00000001847	-	100	94.557	ENSMODG00000018546	-	98	93.313	Monodelphis_domestica
ENSSHAG00000001847	-	94	57.190	ENSMALG00000020673	ddx43	83	59.696	Monopterus_albus
ENSSHAG00000001847	-	94	60.261	ENSNBRG00000010942	ddx43	84	62.671	Neolamprologus_brichardi
ENSSHAG00000001847	-	92	61.800	ENSONIG00000001195	ddx43	87	63.130	Oreochromis_niloticus
ENSSHAG00000001847	-	58	71.316	ENSOANG00000006467	-	100	69.565	Ornithorhynchus_anatinus
ENSSHAG00000001847	-	91	60.804	ENSORLG00000002267	ddx43	88	62.238	Oryzias_latipes
ENSSHAG00000001847	-	91	60.804	ENSORLG00020018592	ddx43	88	62.238	Oryzias_latipes_hni
ENSSHAG00000001847	-	91	60.637	ENSORLG00015004854	ddx43	87	62.063	Oryzias_latipes_hsok
ENSSHAG00000001847	-	89	61.485	ENSOMEG00000023418	ddx43	89	61.026	Oryzias_melastigma
ENSSHAG00000001847	-	92	61.800	ENSPKIG00000002941	ddx43	80	63.540	Paramormyrops_kingsleyae
ENSSHAG00000001847	-	94	64.434	ENSPSIG00000002202	-	90	68.319	Pelodiscus_sinensis
ENSSHAG00000001847	-	69	95.928	ENSPCIG00000017981	-	100	95.928	Phascolarctos_cinereus
ENSSHAG00000001847	-	93	66.555	ENSPCIG00000002492	-	93	67.647	Phascolarctos_cinereus
ENSSHAG00000001847	-	88	59.375	ENSPFOG00000004241	ddx43	83	59.215	Poecilia_formosa
ENSSHAG00000001847	-	88	59.445	ENSPLAG00000023362	ddx43	83	59.284	Poecilia_latipinna
ENSSHAG00000001847	-	92	58.086	ENSPMEG00000004870	ddx43	83	59.556	Poecilia_mexicana
ENSSHAG00000001847	-	88	53.954	ENSPREG00000000923	ddx43	82	53.886	Poecilia_reticulata
ENSSHAG00000001847	-	92	57.686	ENSPNYG00000009064	ddx43	86	58.209	Pundamilia_nyererei
ENSSHAG00000001847	-	96	57.975	ENSPNAG00000001232	ddx43	79	63.732	Pygocentrus_nattereri
ENSSHAG00000001847	-	90	59.478	ENSSFOG00015012193	ddx43	89	59.478	Scleropages_formosus
ENSSHAG00000001847	-	92	59.766	ENSSMAG00000019288	ddx43	79	60.976	Scophthalmus_maximus
ENSSHAG00000001847	-	93	59.283	ENSSDUG00000020120	ddx43	81	61.672	Seriola_dumerili
ENSSHAG00000001847	-	93	59.038	ENSSLDG00000017225	ddx43	79	60.993	Seriola_lalandi_dorsalis
ENSSHAG00000001847	-	76	62.777	ENSSPUG00000018097	-	99	62.777	Sphenodon_punctatus
ENSSHAG00000001847	-	88	63.668	ENSSPAG00000006858	ddx43	81	63.668	Stegastes_partitus
ENSSHAG00000001847	-	95	64.169	ENSTGUG00000012684	-	96	67.247	Taeniopygia_guttata
ENSSHAG00000001847	-	88	56.701	ENSTRUG00000012795	ddx43	86	56.061	Takifugu_rubripes
ENSSHAG00000001847	-	89	60.348	ENSTNIG00000009822	ddx43	98	60.276	Tetraodon_nigroviridis
ENSSHAG00000001847	-	96	64.412	ENSXETG00000011767	ddx43	88	65.320	Xenopus_tropicalis
ENSSHAG00000001847	-	79	62.672	ENSXCOG00000013810	ddx43	78	62.672	Xiphophorus_couchianus
ENSSHAG00000001847	-	92	58.553	ENSXMAG00000017126	ddx43	84	59.191	Xiphophorus_maculatus