EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000001928 (Gene tree)
Gene ID: 100932216
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 5864 bases
Position: chrGL864913.1:20126-25989
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002166	Tudor-knot	PF11717.8	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002190	-	1528	-	ENSSHAP00000002166	481 (aa)	-	G3VG62

Gene Model

Click here to download ENSSHAG00000001928's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr05166	Human T-cell leukemia virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000001928	-	72	54.064	ENSSHAG00000011739	KAT8	75	53.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001928	-	100	77.126	ENSAPOG00000016436	kat5b	92	78.029	Acanthochromis_polyacanthus
ENSSHAG00000001928	-	100	77.413	ENSACIG00000010425	kat5b	94	77.413	Amphilophus_citrinellus
ENSSHAG00000001928	-	100	74.763	ENSAOCG00000014287	kat5b	94	74.763	Amphiprion_ocellaris
ENSSHAG00000001928	-	100	75.442	ENSAPEG00000001944	kat5b	94	75.442	Amphiprion_percula
ENSSHAG00000001928	-	100	79.918	ENSATEG00000016047	kat5b	91	79.918	Anabas_testudineus
ENSSHAG00000001928	-	100	75.400	ENSACLG00000015105	kat5b	94	75.400	Astatotilapia_calliptera
ENSSHAG00000001928	-	100	78.776	ENSAMXG00000009091	kat5b	95	78.776	Astyanax_mexicanus
ENSSHAG00000001928	-	78	58.065	WBGene00007029	mys-1	85	58.065	Caenorhabditis_elegans
ENSSHAG00000001928	-	100	59.838	ENSCSAVG00000004784	-	87	77.451	Ciona_savignyi
ENSSHAG00000001928	-	100	73.805	ENSCSEG00000014541	kat5b	94	73.805	Cynoglossus_semilaevis
ENSSHAG00000001928	-	100	75.494	ENSCVAG00000012685	kat5b	94	73.864	Cyprinodon_variegatus
ENSSHAG00000001928	-	100	75.734	ENSDARG00000045951	kat5b	95	75.734	Danio_rerio
ENSSHAG00000001928	-	100	77.530	ENSDARG00000004587	kat5b	95	77.530	Danio_rerio
ENSSHAG00000001928	-	99	58.366	FBgn0026080	Tip60	93	58.366	Drosophila_melanogaster
ENSSHAG00000001928	-	75	62.366	ENSEBUG00000001775	kat5b	92	63.978	Eptatretus_burgeri
ENSSHAG00000001928	-	100	77.547	ENSELUG00000016941	kat5b	95	77.547	Esox_lucius
ENSSHAG00000001928	-	100	72.913	ENSFHEG00000003516	kat5b	94	72.913	Fundulus_heteroclitus
ENSSHAG00000001928	-	100	77.597	ENSGAFG00000004081	kat5b	99	77.597	Gambusia_affinis
ENSSHAG00000001928	-	100	79.880	ENSGACG00000020408	kat5b	95	80.279	Gasterosteus_aculeatus
ENSSHAG00000001928	-	84	88.352	ENSHBUG00000023213	kat5b	94	75.103	Haplochromis_burtoni
ENSSHAG00000001928	-	100	76.923	ENSHCOG00000002064	kat5b	94	77.126	Hippocampus_comes
ENSSHAG00000001928	-	100	73.805	ENSIPUG00000014489	kat5b	94	73.805	Ictalurus_punctatus
ENSSHAG00000001928	-	100	72.445	ENSKMAG00000009020	kat5b	94	72.445	Kryptolebias_marmoratus
ENSSHAG00000001928	-	85	88.235	ENSLBEG00000024629	-	89	88.235	Labrus_bergylta
ENSSHAG00000001928	-	85	88.235	ENSLBEG00000011107	-	89	88.235	Labrus_bergylta
ENSSHAG00000001928	-	100	78.411	ENSMAMG00000016643	kat5b	95	78.411	Mastacembelus_armatus
ENSSHAG00000001928	-	100	71.483	ENSMZEG00005016654	kat5b	94	71.614	Maylandia_zebra
ENSSHAG00000001928	-	100	74.857	ENSMMOG00000016639	kat5b	96	74.857	Mola_mola
ENSSHAG00000001928	-	100	73.077	ENSMALG00000017235	kat5b	94	73.077	Monopterus_albus
ENSSHAG00000001928	-	78	82.275	ENSODEG00000016524	-	87	82.275	Octodon_degus
ENSSHAG00000001928	-	100	74.213	ENSONIG00000005359	kat5b	94	73.786	Oreochromis_niloticus
ENSSHAG00000001928	-	100	72.045	ENSORLG00000007458	kat5b	95	71.165	Oryzias_latipes
ENSSHAG00000001928	-	100	74.419	ENSORLG00020004495	kat5b	95	73.473	Oryzias_latipes_hni
ENSSHAG00000001928	-	100	71.534	ENSORLG00015009730	kat5b	95	71.165	Oryzias_latipes_hsok
ENSSHAG00000001928	-	100	75.551	ENSOMEG00000002350	kat5b	95	72.608	Oryzias_melastigma
ENSSHAG00000001928	-	100	77.465	ENSPKIG00000019383	kat5b	95	78.645	Paramormyrops_kingsleyae
ENSSHAG00000001928	-	100	72.274	ENSPMGG00000020103	kat5b	95	72.458	Periophthalmus_magnuspinnatus
ENSSHAG00000001928	-	100	70.482	ENSPMAG00000008957	kat5b	95	70.482	Petromyzon_marinus
ENSSHAG00000001928	-	100	74.286	ENSPFOG00000010293	kat5b	94	74.286	Poecilia_formosa
ENSSHAG00000001928	-	100	72.828	ENSPLAG00000015158	kat5b	94	72.828	Poecilia_latipinna
ENSSHAG00000001928	-	100	76.349	ENSPMEG00000008824	kat5b	94	72.828	Poecilia_mexicana
ENSSHAG00000001928	-	100	72.828	ENSPREG00000022986	kat5b	94	72.828	Poecilia_reticulata
ENSSHAG00000001928	-	100	75.600	ENSPNYG00000017128	kat5b	94	75.600	Pundamilia_nyererei
ENSSHAG00000001928	-	100	76.411	ENSPNAG00000022600	-	93	76.411	Pygocentrus_nattereri
ENSSHAG00000001928	-	100	76.876	ENSPNAG00000003741	-	95	76.876	Pygocentrus_nattereri
ENSSHAG00000001928	-	100	76.000	ENSSFOG00015005779	kat5	95	76.000	Scleropages_formosus
ENSSHAG00000001928	-	83	95.283	ENSSMAG00000013982	kat5b	92	78.208	Scophthalmus_maximus
ENSSHAG00000001928	-	100	73.866	ENSSDUG00000010863	kat5b	94	73.866	Seriola_dumerili
ENSSHAG00000001928	-	100	71.678	ENSSLDG00000018594	kat5b	95	71.678	Seriola_lalandi_dorsalis
ENSSHAG00000001928	-	100	77.096	ENSSPAG00000016282	kat5b	95	77.096	Stegastes_partitus
ENSSHAG00000001928	-	100	74.011	ENSTRUG00000016643	kat5b	95	74.011	Takifugu_rubripes
ENSSHAG00000001928	-	100	79.125	ENSTNIG00000011743	kat5b	95	79.125	Tetraodon_nigroviridis
ENSSHAG00000001928	-	100	92.608	ENSUMAG00000010712	-	98	92.608	Ursus_maritimus
ENSSHAG00000001928	-	100	68.994	ENSXETG00000020586	kat5	95	69.405	Xenopus_tropicalis
ENSSHAG00000001928	-	100	77.640	ENSXMAG00000005173	kat5b	94	77.640	Xiphophorus_maculatus