EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000001991 (Gene tree)
Gene ID: 100933419
Gene Symbol: PARP1
Alias: ADPRT|PARP|PPOL
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 35567 bases
Position: chrGL857859.1:21461-57027
Accession: 270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002240	PARP	PF00644.20	3.4e-73	1	1
ENSSHAP00000002241	PARP	PF00644.20	3.9e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002264	PARP1-201	3272	-	ENSSHAP00000002240	972 (aa)	-	G3VGD6
ENSSHAT00000002265	PARP1-202	3233	-	ENSSHAP00000002241	962 (aa)	-	G3VGD7

Gene Model

Click here to download ENSSHAG00000001991's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03410	Base excision repair	KEGG
shr04210	Apoptosis	KEGG
shr04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000001991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000001991	PARP1	53	33.148	ENSSHAG00000007455	PARP3	83	33.750
ENSSHAG00000001991	PARP1	50	43.056	ENSSHAG00000013256	PARP2	97	43.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000001991	PARP1	100	84.631	ENSG00000143799	PARP1	99	84.000	Homo_sapiens
ENSSHAG00000001991	PARP1	100	70.846	ENSAPOG00000006414	parp1	96	70.031	Acanthochromis_polyacanthus
ENSSHAG00000001991	PARP1	100	82.515	ENSAMEG00000014451	PARP1	99	81.576	Ailuropoda_melanoleuca
ENSSHAG00000001991	PARP1	100	70.757	ENSACIG00000005651	parp1	99	69.908	Amphilophus_citrinellus
ENSSHAG00000001991	PARP1	100	71.677	ENSAOCG00000021005	parp1	99	70.757	Amphiprion_ocellaris
ENSSHAG00000001991	PARP1	100	71.575	ENSAPEG00000004784	parp1	99	70.654	Amphiprion_percula
ENSSHAG00000001991	PARP1	100	71.224	ENSATEG00000010457	parp1	96	70.612	Anabas_testudineus
ENSSHAG00000001991	PARP1	90	82.005	ENSAPLG00000014039	PARP1	100	82.005	Anas_platyrhynchos
ENSSHAG00000001991	PARP1	100	79.424	ENSACAG00000006189	PARP1	99	79.218	Anolis_carolinensis
ENSSHAG00000001991	PARP1	100	84.821	ENSANAG00000032699	PARP1	99	84.189	Aotus_nancymaae
ENSSHAG00000001991	PARP1	100	71.779	ENSACLG00000015489	parp1	99	70.931	Astatotilapia_calliptera
ENSSHAG00000001991	PARP1	100	70.804	ENSAMXG00000006465	parp1	96	70.092	Astyanax_mexicanus
ENSSHAG00000001991	PARP1	100	82.359	ENSBTAG00000000837	PARP1	99	81.846	Bos_taurus
ENSSHAG00000001991	PARP1	83	44.622	WBGene00004049	parp-1	100	47.510	Caenorhabditis_elegans
ENSSHAG00000001991	PARP1	100	84.308	ENSCJAG00000012831	PARP1	99	83.676	Callithrix_jacchus
ENSSHAG00000001991	PARP1	100	83.282	ENSCAFG00000016089	PARP1	100	83.179	Canis_familiaris
ENSSHAG00000001991	PARP1	100	83.179	ENSCAFG00020001660	PARP1	99	83.077	Canis_lupus_dingo
ENSSHAG00000001991	PARP1	100	82.769	ENSCHIG00000018072	PARP1	99	82.480	Capra_hircus
ENSSHAG00000001991	PARP1	94	85.201	ENSTSYG00000003699	PARP1	99	84.454	Carlito_syrichta
ENSSHAG00000001991	PARP1	100	69.846	ENSCAPG00000011113	-	99	68.619	Cavia_aperea
ENSSHAG00000001991	PARP1	100	82.872	ENSCPOG00000015643	-	99	81.501	Cavia_porcellus
ENSSHAG00000001991	PARP1	100	84.631	ENSCCAG00000033484	PARP1	99	84.000	Cebus_capucinus
ENSSHAG00000001991	PARP1	100	84.426	ENSCATG00000038981	PARP1	99	83.795	Cercocebus_atys
ENSSHAG00000001991	PARP1	100	82.377	ENSCLAG00000006637	PARP1	99	81.109	Chinchilla_lanigera
ENSSHAG00000001991	PARP1	64	93.750	ENSCHOG00000003539	PARP1	61	93.750	Choloepus_hoffmanni
ENSSHAG00000001991	PARP1	100	83.025	ENSCPBG00000011958	PARP1	99	83.025	Chrysemys_picta_bellii
ENSSHAG00000001991	PARP1	100	84.119	ENSCANG00000041340	PARP1	99	83.487	Colobus_angolensis_palliatus
ENSSHAG00000001991	PARP1	100	84.221	ENSCGRG00001020559	Parp1	99	83.368	Cricetulus_griseus_chok1gshd
ENSSHAG00000001991	PARP1	100	84.221	ENSCGRG00000004864	Parp1	99	83.368	Cricetulus_griseus_crigri
ENSSHAG00000001991	PARP1	100	70.031	ENSCSEG00000020665	parp1	99	78.340	Cynoglossus_semilaevis
ENSSHAG00000001991	PARP1	100	70.654	ENSCVAG00000021372	parp1	99	70.654	Cyprinodon_variegatus
ENSSHAG00000001991	PARP1	100	70.948	ENSDARG00000019529	parp1	96	70.744	Danio_rerio
ENSSHAG00000001991	PARP1	100	82.359	ENSDNOG00000012059	PARP1	100	81.192	Dasypus_novemcinctus
ENSSHAG00000001991	PARP1	100	81.006	ENSDORG00000005234	Parp1	99	81.520	Dipodomys_ordii
ENSSHAG00000001991	PARP1	99	41.752	FBgn0010247	Parp	96	41.337	Drosophila_melanogaster
ENSSHAG00000001991	PARP1	87	95.312	ENSETEG00000013254	PARP1	87	95.312	Echinops_telfairi
ENSSHAG00000001991	PARP1	100	59.356	ENSEBUG00000005820	parp1	100	58.894	Eptatretus_burgeri
ENSSHAG00000001991	PARP1	98	83.908	ENSEASG00005013275	PARP1	98	82.863	Equus_asinus_asinus
ENSSHAG00000001991	PARP1	100	83.897	ENSECAG00000019207	PARP1	99	83.060	Equus_caballus
ENSSHAG00000001991	PARP1	100	81.045	ENSEEUG00000012253	PARP1	99	80.718	Erinaceus_europaeus
ENSSHAG00000001991	PARP1	100	70.062	ENSELUG00000017336	parp1	99	70.267	Esox_lucius
ENSSHAG00000001991	PARP1	100	83.179	ENSFCAG00000005777	PARP1	99	81.706	Felis_catus
ENSSHAG00000001991	PARP1	100	80.453	ENSFALG00000011578	PARP1	99	80.556	Ficedula_albicollis
ENSSHAG00000001991	PARP1	100	81.762	ENSFDAG00000017662	PARP1	99	80.493	Fukomys_damarensis
ENSSHAG00000001991	PARP1	100	70.757	ENSFHEG00000001117	parp1	99	70.612	Fundulus_heteroclitus
ENSSHAG00000001991	PARP1	100	69.877	ENSGMOG00000014929	parp1	99	69.262	Gadus_morhua
ENSSHAG00000001991	PARP1	100	80.967	ENSGALG00000009228	PARP1	99	81.070	Gallus_gallus
ENSSHAG00000001991	PARP1	100	70.859	ENSGAFG00000010450	parp1	99	70.654	Gambusia_affinis
ENSSHAG00000001991	PARP1	100	69.459	ENSGACG00000011280	parp1	99	68.846	Gasterosteus_aculeatus
ENSSHAG00000001991	PARP1	100	82.202	ENSGAGG00000010066	PARP1	99	81.584	Gopherus_agassizii
ENSSHAG00000001991	PARP1	100	84.324	ENSGGOG00000006308	PARP1	99	83.692	Gorilla_gorilla
ENSSHAG00000001991	PARP1	100	72.114	ENSHBUG00000010490	parp1	99	69.725	Haplochromis_burtoni
ENSSHAG00000001991	PARP1	100	81.333	ENSHGLG00000003992	PARP1	93	80.267	Heterocephalus_glaber_female
ENSSHAG00000001991	PARP1	100	81.333	ENSHGLG00100016965	PARP1	93	80.267	Heterocephalus_glaber_male
ENSSHAG00000001991	PARP1	100	69.654	ENSHCOG00000011619	parp1	99	69.654	Hippocampus_comes
ENSSHAG00000001991	PARP1	100	69.433	ENSIPUG00000020250	parp1	99	68.997	Ictalurus_punctatus
ENSSHAG00000001991	PARP1	100	84.221	ENSSTOG00000016000	PARP1	99	82.854	Ictidomys_tridecemlineatus
ENSSHAG00000001991	PARP1	100	82.395	ENSJJAG00000023497	Parp1	99	82.051	Jaculus_jaculus
ENSSHAG00000001991	PARP1	100	70.245	ENSKMAG00000011627	parp1	99	70.450	Kryptolebias_marmoratus
ENSSHAG00000001991	PARP1	100	71.238	ENSLBEG00000013376	parp1	99	70.317	Labrus_bergylta
ENSSHAG00000001991	PARP1	100	57.606	ENSLACG00000002735	PARP1	99	57.751	Latimeria_chalumnae
ENSSHAG00000001991	PARP1	100	74.074	ENSLOCG00000015798	parp1	99	74.230	Lepisosteus_oculatus
ENSSHAG00000001991	PARP1	100	81.148	ENSLAFG00000007830	PARP1	99	80.903	Loxodonta_africana
ENSSHAG00000001991	PARP1	100	84.324	ENSMFAG00000002526	PARP1	99	83.795	Macaca_fascicularis
ENSSHAG00000001991	PARP1	100	84.426	ENSMMUG00000021820	PARP1	99	83.897	Macaca_mulatta
ENSSHAG00000001991	PARP1	100	84.426	ENSMNEG00000034074	PARP1	99	83.795	Macaca_nemestrina
ENSSHAG00000001991	PARP1	100	82.329	ENSMLEG00000012344	PARP1	99	81.697	Mandrillus_leucophaeus
ENSSHAG00000001991	PARP1	100	71.663	ENSMAMG00000020652	parp1	99	70.842	Mastacembelus_armatus
ENSSHAG00000001991	PARP1	100	72.421	ENSMZEG00005016907	parp1	99	71.268	Maylandia_zebra
ENSSHAG00000001991	PARP1	100	80.453	ENSMGAG00000007760	PARP1	99	80.453	Meleagris_gallopavo
ENSSHAG00000001991	PARP1	100	83.811	ENSMAUG00000008306	Parp1	99	83.060	Mesocricetus_auratus
ENSSHAG00000001991	PARP1	100	80.328	ENSMICG00000017076	PARP1	99	78.747	Microcebus_murinus
ENSSHAG00000001991	PARP1	100	82.974	ENSMOCG00000014315	Parp1	99	82.444	Microtus_ochrogaster
ENSSHAG00000001991	PARP1	100	70.667	ENSMMOG00000015966	parp1	99	70.245	Mola_mola
ENSSHAG00000001991	PARP1	100	95.165	ENSMODG00000006076	PARP1	99	95.165	Monodelphis_domestica
ENSSHAG00000001991	PARP1	100	69.325	ENSMALG00000004057	parp1	99	68.814	Monopterus_albus
ENSSHAG00000001991	PARP1	100	83.828	MGP_CAROLIEiJ_G0014978	Parp1	100	93.878	Mus_caroli
ENSSHAG00000001991	PARP1	100	83.828	ENSMUSG00000026496	Parp1	99	93.878	Mus_musculus
ENSSHAG00000001991	PARP1	100	83.828	MGP_SPRETEiJ_G0015777	Parp1	100	93.878	Mus_spretus
ENSSHAG00000001991	PARP1	100	82.444	ENSMPUG00000004585	PARP1	99	81.603	Mustela_putorius_furo
ENSSHAG00000001991	PARP1	93	69.222	ENSMLUG00000012285	PARP1	85	88.194	Myotis_lucifugus
ENSSHAG00000001991	PARP1	100	83.487	ENSNGAG00000003885	Parp1	99	82.854	Nannospalax_galili
ENSSHAG00000001991	PARP1	100	71.881	ENSNBRG00000017434	parp1	99	71.034	Neolamprologus_brichardi
ENSSHAG00000001991	PARP1	94	91.270	ENSNLEG00000013905	PARP1	99	91.270	Nomascus_leucogenys
ENSSHAG00000001991	PARP1	70	99.104	ENSMEUG00000007720	PARP1	87	99.104	Notamacropus_eugenii
ENSSHAG00000001991	PARP1	100	84.016	ENSOPRG00000011722	PARP1	99	82.957	Ochotona_princeps
ENSSHAG00000001991	PARP1	100	80.103	ENSODEG00000007424	PARP1	99	79.651	Octodon_degus
ENSSHAG00000001991	PARP1	100	72.086	ENSONIG00000013486	parp1	99	71.166	Oreochromis_niloticus
ENSSHAG00000001991	PARP1	100	86.872	ENSOANG00000001488	PARP1	100	86.667	Ornithorhynchus_anatinus
ENSSHAG00000001991	PARP1	100	83.811	ENSOCUG00000017820	PARP1	99	83.282	Oryctolagus_cuniculus
ENSSHAG00000001991	PARP1	100	71.152	ENSORLG00000013691	parp1	99	70.948	Oryzias_latipes
ENSSHAG00000001991	PARP1	100	71.152	ENSORLG00020001074	parp1	99	70.948	Oryzias_latipes_hni
ENSSHAG00000001991	PARP1	100	71.050	ENSORLG00015007090	parp1	99	70.846	Oryzias_latipes_hsok
ENSSHAG00000001991	PARP1	100	83.299	ENSOGAG00000016206	PARP1	99	82.359	Otolemur_garnettii
ENSSHAG00000001991	PARP1	100	82.872	ENSOARG00000000811	PARP1	99	81.307	Ovis_aries
ENSSHAG00000001991	PARP1	100	84.529	ENSPPAG00000040862	PARP1	99	83.897	Pan_paniscus
ENSSHAG00000001991	PARP1	100	83.282	ENSPPRG00000003528	PARP1	99	81.809	Panthera_pardus
ENSSHAG00000001991	PARP1	97	70.347	ENSPTIG00000009102	PARP1	98	68.311	Panthera_tigris_altaica
ENSSHAG00000001991	PARP1	100	84.529	ENSPTRG00000002049	PARP1	99	83.897	Pan_troglodytes
ENSSHAG00000001991	PARP1	100	84.545	ENSPANG00000011198	PARP1	99	83.914	Papio_anubis
ENSSHAG00000001991	PARP1	100	70.462	ENSPKIG00000006039	parp1	100	69.846	Paramormyrops_kingsleyae
ENSSHAG00000001991	PARP1	100	81.967	ENSPSIG00000016374	PARP1	99	81.967	Pelodiscus_sinensis
ENSSHAG00000001991	PARP1	100	67.314	ENSPMGG00000008936	parp1	99	66.496	Periophthalmus_magnuspinnatus
ENSSHAG00000001991	PARP1	100	84.119	ENSPEMG00000020230	Parp1	99	83.162	Peromyscus_maniculatus_bairdii
ENSSHAG00000001991	PARP1	100	96.091	ENSPCIG00000006436	PARP1	99	96.091	Phascolarctos_cinereus
ENSSHAG00000001991	PARP1	100	70.757	ENSPFOG00000002342	parp1	99	70.582	Poecilia_formosa
ENSSHAG00000001991	PARP1	100	71.166	ENSPLAG00000000909	parp1	99	70.961	Poecilia_latipinna
ENSSHAG00000001991	PARP1	100	71.370	ENSPMEG00000013979	parp1	99	71.166	Poecilia_mexicana
ENSSHAG00000001991	PARP1	100	71.472	ENSPREG00000001114	parp1	99	71.166	Poecilia_reticulata
ENSSHAG00000001991	PARP1	100	84.939	ENSPPYG00000000164	PARP1	100	84.308	Pongo_abelii
ENSSHAG00000001991	PARP1	58	91.975	ENSPCAG00000005558	-	56	91.975	Procavia_capensis
ENSSHAG00000001991	PARP1	100	83.795	ENSPCOG00000016918	PARP1	99	82.854	Propithecus_coquereli
ENSSHAG00000001991	PARP1	85	92.453	ENSPVAG00000005543	PARP1	81	92.453	Pteropus_vampyrus
ENSSHAG00000001991	PARP1	100	71.779	ENSPNYG00000009702	parp1	99	70.931	Pundamilia_nyererei
ENSSHAG00000001991	PARP1	100	71.079	ENSPNAG00000002787	parp1	99	71.617	Pygocentrus_nattereri
ENSSHAG00000001991	PARP1	100	83.504	ENSRNOG00000003084	Parp1	99	82.667	Rattus_norvegicus
ENSSHAG00000001991	PARP1	100	84.221	ENSRBIG00000044893	PARP1	100	83.649	Rhinopithecus_bieti
ENSSHAG00000001991	PARP1	100	61.043	ENSRROG00000040615	-	100	65.207	Rhinopithecus_roxellana
ENSSHAG00000001991	PARP1	100	84.221	ENSRROG00000029280	PARP1	100	83.649	Rhinopithecus_roxellana
ENSSHAG00000001991	PARP1	100	84.205	ENSSBOG00000010144	PARP1	99	83.795	Saimiri_boliviensis_boliviensis
ENSSHAG00000001991	PARP1	100	71.531	ENSSFOG00015020017	parp1	99	70.757	Scleropages_formosus
ENSSHAG00000001991	PARP1	100	70.552	ENSSMAG00000013799	parp1	99	69.836	Scophthalmus_maximus
ENSSHAG00000001991	PARP1	100	70.961	ENSSDUG00000016626	parp1	99	70.041	Seriola_dumerili
ENSSHAG00000001991	PARP1	100	70.859	ENSSLDG00000006384	parp1	99	69.939	Seriola_lalandi_dorsalis
ENSSHAG00000001991	PARP1	55	90.741	ENSSARG00000009436	-	55	90.741	Sorex_araneus
ENSSHAG00000001991	PARP1	100	77.492	ENSSPUG00000007790	PARP1	99	76.876	Sphenodon_punctatus
ENSSHAG00000001991	PARP1	100	69.160	ENSSPAG00000019074	parp1	99	69.765	Stegastes_partitus
ENSSHAG00000001991	PARP1	100	82.992	ENSSSCG00000023660	PARP1	99	82.462	Sus_scrofa
ENSSHAG00000001991	PARP1	92	80.846	ENSTGUG00000004260	-	100	80.958	Taeniopygia_guttata
ENSSHAG00000001991	PARP1	100	70.276	ENSTRUG00000014490	parp1	99	69.969	Takifugu_rubripes
ENSSHAG00000001991	PARP1	100	69.990	ENSTNIG00000016384	parp1	99	69.481	Tetraodon_nigroviridis
ENSSHAG00000001991	PARP1	89	86.076	ENSTBEG00000002364	PARP1	92	91.270	Tupaia_belangeri
ENSSHAG00000001991	PARP1	100	78.564	ENSTTRG00000000188	PARP1	99	78.462	Tursiops_truncatus
ENSSHAG00000001991	PARP1	100	82.720	ENSUAMG00000014388	PARP1	100	82.515	Ursus_americanus
ENSSHAG00000001991	PARP1	100	73.797	ENSUMAG00000014555	PARP1	99	73.722	Ursus_maritimus
ENSSHAG00000001991	PARP1	83	93.725	ENSVPAG00000011411	PARP1	83	93.725	Vicugna_pacos
ENSSHAG00000001991	PARP1	100	83.282	ENSVVUG00000001655	PARP1	100	83.179	Vulpes_vulpes
ENSSHAG00000001991	PARP1	99	75.542	ENSXETG00000022610	parp1	96	74.716	Xenopus_tropicalis
ENSSHAG00000001991	PARP1	100	70.552	ENSXMAG00000003632	parp1	99	70.348	Xiphophorus_maculatus