EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002102 (Gene tree)
Gene ID: 100915491
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 6441 bases
Position: chrGL842642.1:23422-29862
Accession: 20992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002369	Ribonuc_P_40	PF08584.11	2.6e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002394	RPP40-201	837	-	ENSSHAP00000002369	278 (aa)	-	G3VGR5

Gene Model

Click here to download ENSSHAG00000002102's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002102	RPP40	100	79.496	ENSG00000124787	RPP40	92	79.496	Homo_sapiens
ENSSHAG00000002102	RPP40	79	34.247	ENSAPOG00000008660	rpp40	71	34.247	Acanthochromis_polyacanthus
ENSSHAG00000002102	RPP40	100	79.496	ENSAMEG00000012938	RPP40	77	79.496	Ailuropoda_melanoleuca
ENSSHAG00000002102	RPP40	99	37.956	ENSACIG00000003617	rpp40	73	37.956	Amphilophus_citrinellus
ENSSHAG00000002102	RPP40	99	38.686	ENSAOCG00000011846	rpp40	75	38.686	Amphiprion_ocellaris
ENSSHAG00000002102	RPP40	99	38.686	ENSAPEG00000001322	rpp40	75	38.686	Amphiprion_percula
ENSSHAG00000002102	RPP40	99	38.406	ENSATEG00000006584	rpp40	75	38.406	Anabas_testudineus
ENSSHAG00000002102	RPP40	100	71.583	ENSAPLG00000005691	RPP40	92	71.583	Anas_platyrhynchos
ENSSHAG00000002102	RPP40	99	66.426	ENSACAG00000006550	RPP40	68	66.426	Anolis_carolinensis
ENSSHAG00000002102	RPP40	100	76.978	ENSANAG00000029246	RPP40	79	76.978	Aotus_nancymaae
ENSSHAG00000002102	RPP40	96	38.806	ENSACLG00000015883	rpp40	72	38.806	Astatotilapia_calliptera
ENSSHAG00000002102	RPP40	99	49.270	ENSAMXG00000001755	rpp40	76	49.270	Astyanax_mexicanus
ENSSHAG00000002102	RPP40	100	76.259	ENSBTAG00000003332	RPP40	77	76.259	Bos_taurus
ENSSHAG00000002102	RPP40	100	78.777	ENSCJAG00000021373	RPP40	77	78.777	Callithrix_jacchus
ENSSHAG00000002102	RPP40	100	79.856	ENSCAFG00000009435	RPP40	77	79.856	Canis_familiaris
ENSSHAG00000002102	RPP40	100	79.856	ENSCAFG00020013380	RPP40	77	79.856	Canis_lupus_dingo
ENSSHAG00000002102	RPP40	100	76.978	ENSCHIG00000016849	RPP40	92	76.978	Capra_hircus
ENSSHAG00000002102	RPP40	100	79.137	ENSTSYG00000032857	RPP40	92	79.137	Carlito_syrichta
ENSSHAG00000002102	RPP40	100	70.144	ENSCAPG00000004957	RPP40	82	70.144	Cavia_aperea
ENSSHAG00000002102	RPP40	100	76.978	ENSCPOG00000005855	RPP40	77	76.978	Cavia_porcellus
ENSSHAG00000002102	RPP40	100	78.417	ENSCCAG00000019809	RPP40	77	78.417	Cebus_capucinus
ENSSHAG00000002102	RPP40	100	78.058	ENSCATG00000038787	RPP40	77	78.058	Cercocebus_atys
ENSSHAG00000002102	RPP40	100	77.338	ENSCLAG00000003235	RPP40	77	77.338	Chinchilla_lanigera
ENSSHAG00000002102	RPP40	100	79.137	ENSCSAG00000007307	RPP40	77	79.137	Chlorocebus_sabaeus
ENSSHAG00000002102	RPP40	90	63.200	ENSCHOG00000005856	-	100	63.200	Choloepus_hoffmanni
ENSSHAG00000002102	RPP40	100	74.460	ENSCPBG00000009003	RPP40	76	74.460	Chrysemys_picta_bellii
ENSSHAG00000002102	RPP40	100	79.496	ENSCANG00000033965	RPP40	77	79.496	Colobus_angolensis_palliatus
ENSSHAG00000002102	RPP40	100	73.741	ENSCGRG00001018328	Rpp40	76	73.741	Cricetulus_griseus_chok1gshd
ENSSHAG00000002102	RPP40	100	73.741	ENSCGRG00000011344	Rpp40	76	73.741	Cricetulus_griseus_crigri
ENSSHAG00000002102	RPP40	99	36.364	ENSCSEG00000015006	-	75	36.364	Cynoglossus_semilaevis
ENSSHAG00000002102	RPP40	97	34.767	ENSCVAG00000012169	rpp40	100	34.767	Cyprinodon_variegatus
ENSSHAG00000002102	RPP40	99	48.727	ENSDARG00000017605	rpp40	76	48.727	Danio_rerio
ENSSHAG00000002102	RPP40	76	74.528	ENSDNOG00000048136	RPP40	71	74.528	Dasypus_novemcinctus
ENSSHAG00000002102	RPP40	97	64.493	ENSDORG00000011196	-	80	64.202	Dipodomys_ordii
ENSSHAG00000002102	RPP40	100	75.899	ENSDORG00000029944	-	77	75.899	Dipodomys_ordii
ENSSHAG00000002102	RPP40	78	74.771	ENSETEG00000007458	RPP40	60	74.771	Echinops_telfairi
ENSSHAG00000002102	RPP40	99	42.391	ENSEBUG00000000386	rpp40	85	42.391	Eptatretus_burgeri
ENSSHAG00000002102	RPP40	100	80.216	ENSEASG00005012116	RPP40	61	80.216	Equus_asinus_asinus
ENSSHAG00000002102	RPP40	100	79.496	ENSECAG00000017247	RPP40	61	79.496	Equus_caballus
ENSSHAG00000002102	RPP40	74	71.014	ENSEEUG00000012087	RPP40	70	71.014	Erinaceus_europaeus
ENSSHAG00000002102	RPP40	99	50.909	ENSELUG00000017004	rpp40	76	50.909	Esox_lucius
ENSSHAG00000002102	RPP40	100	78.417	ENSFCAG00000009249	RPP40	77	78.417	Felis_catus
ENSSHAG00000002102	RPP40	100	70.890	ENSFALG00000013166	RPP40	89	70.890	Ficedula_albicollis
ENSSHAG00000002102	RPP40	99	61.818	ENSFDAG00000000265	-	93	61.818	Fukomys_damarensis
ENSSHAG00000002102	RPP40	100	80.216	ENSFDAG00000013001	-	77	80.216	Fukomys_damarensis
ENSSHAG00000002102	RPP40	99	38.686	ENSFHEG00000021429	rpp40	67	38.686	Fundulus_heteroclitus
ENSSHAG00000002102	RPP40	97	36.667	ENSGMOG00000018653	rpp40	81	36.667	Gadus_morhua
ENSSHAG00000002102	RPP40	100	72.302	ENSGALG00000036074	RPP40	76	72.302	Gallus_gallus
ENSSHAG00000002102	RPP40	99	33.942	ENSGAFG00000004189	-	89	33.942	Gambusia_affinis
ENSSHAG00000002102	RPP40	99	40.876	ENSGACG00000002472	rpp40	90	39.286	Gasterosteus_aculeatus
ENSSHAG00000002102	RPP40	100	74.460	ENSGAGG00000012918	RPP40	76	74.460	Gopherus_agassizii
ENSSHAG00000002102	RPP40	100	79.856	ENSGGOG00000013764	RPP40	77	79.856	Gorilla_gorilla
ENSSHAG00000002102	RPP40	99	37.906	ENSHBUG00000009378	rpp40	77	37.906	Haplochromis_burtoni
ENSSHAG00000002102	RPP40	100	79.137	ENSHGLG00000004871	RPP40	77	79.137	Heterocephalus_glaber_female
ENSSHAG00000002102	RPP40	100	79.137	ENSHGLG00100002080	RPP40	77	79.137	Heterocephalus_glaber_male
ENSSHAG00000002102	RPP40	97	32.963	ENSHCOG00000013264	-	72	32.963	Hippocampus_comes
ENSSHAG00000002102	RPP40	99	50.730	ENSIPUG00000008951	RPP40	76	50.730	Ictalurus_punctatus
ENSSHAG00000002102	RPP40	100	76.978	ENSSTOG00000011199	RPP40	77	76.978	Ictidomys_tridecemlineatus
ENSSHAG00000002102	RPP40	100	73.022	ENSJJAG00000020629	Rpp40	77	73.022	Jaculus_jaculus
ENSSHAG00000002102	RPP40	99	37.226	ENSKMAG00000019358	rpp40	75	37.226	Kryptolebias_marmoratus
ENSSHAG00000002102	RPP40	99	41.241	ENSLBEG00000022724	rpp40	75	41.241	Labrus_bergylta
ENSSHAG00000002102	RPP40	100	61.511	ENSLACG00000014848	RPP40	77	61.511	Latimeria_chalumnae
ENSSHAG00000002102	RPP40	99	54.182	ENSLOCG00000011650	rpp40	76	54.182	Lepisosteus_oculatus
ENSSHAG00000002102	RPP40	100	78.777	ENSLAFG00000007530	RPP40	92	78.777	Loxodonta_africana
ENSSHAG00000002102	RPP40	100	78.777	ENSMFAG00000043100	RPP40	77	78.777	Macaca_fascicularis
ENSSHAG00000002102	RPP40	100	78.777	ENSMMUG00000004966	RPP40	77	78.777	Macaca_mulatta
ENSSHAG00000002102	RPP40	100	78.777	ENSMNEG00000041986	RPP40	92	78.777	Macaca_nemestrina
ENSSHAG00000002102	RPP40	100	67.266	ENSMLEG00000040851	RPP40	74	75.225	Mandrillus_leucophaeus
ENSSHAG00000002102	RPP40	99	39.416	ENSMAMG00000019551	rpp40	75	39.416	Mastacembelus_armatus
ENSSHAG00000002102	RPP40	99	39.416	ENSMZEG00005019475	rpp40	75	39.416	Maylandia_zebra
ENSSHAG00000002102	RPP40	100	73.022	ENSMGAG00000004009	RPP40	77	73.022	Meleagris_gallopavo
ENSSHAG00000002102	RPP40	100	75.899	ENSMAUG00000010268	Rpp40	77	75.899	Mesocricetus_auratus
ENSSHAG00000002102	RPP40	100	79.137	ENSMICG00000003297	RPP40	77	76.046	Microcebus_murinus
ENSSHAG00000002102	RPP40	100	75.180	ENSMOCG00000000305	Rpp40	77	75.180	Microtus_ochrogaster
ENSSHAG00000002102	RPP40	99	37.818	ENSMMOG00000020591	-	82	37.818	Mola_mola
ENSSHAG00000002102	RPP40	100	91.398	ENSMODG00000009826	RPP40	77	91.398	Monodelphis_domestica
ENSSHAG00000002102	RPP40	99	39.416	ENSMALG00000020133	rpp40	86	39.416	Monopterus_albus
ENSSHAG00000002102	RPP40	100	75.180	MGP_CAROLIEiJ_G0018429	Rpp40	100	53.906	Mus_caroli
ENSSHAG00000002102	RPP40	100	75.180	ENSMUSG00000021418	Rpp40	99	53.906	Mus_musculus
ENSSHAG00000002102	RPP40	100	75.540	MGP_PahariEiJ_G0019497	Rpp40	100	53.906	Mus_pahari
ENSSHAG00000002102	RPP40	100	75.180	MGP_SPRETEiJ_G0019309	Rpp40	100	53.906	Mus_spretus
ENSSHAG00000002102	RPP40	100	79.496	ENSMPUG00000000530	RPP40	71	79.496	Mustela_putorius_furo
ENSSHAG00000002102	RPP40	100	76.619	ENSMLUG00000000501	RPP40	77	76.619	Myotis_lucifugus
ENSSHAG00000002102	RPP40	92	74.708	ENSNGAG00000022529	-	81	74.708	Nannospalax_galili
ENSSHAG00000002102	RPP40	100	77.338	ENSNGAG00000023955	-	77	77.338	Nannospalax_galili
ENSSHAG00000002102	RPP40	95	36.704	ENSNBRG00000017465	rpp40	75	36.704	Neolamprologus_brichardi
ENSSHAG00000002102	RPP40	100	79.496	ENSNLEG00000034397	RPP40	77	79.496	Nomascus_leucogenys
ENSSHAG00000002102	RPP40	90	93.200	ENSMEUG00000005300	RPP40	69	93.200	Notamacropus_eugenii
ENSSHAG00000002102	RPP40	100	70.504	ENSODEG00000018153	-	76	70.504	Octodon_degus
ENSSHAG00000002102	RPP40	100	75.899	ENSODEG00000007255	-	77	75.899	Octodon_degus
ENSSHAG00000002102	RPP40	91	74.206	ENSODEG00000006170	-	84	74.206	Octodon_degus
ENSSHAG00000002102	RPP40	99	38.686	ENSONIG00000014016	rpp40	75	38.686	Oreochromis_niloticus
ENSSHAG00000002102	RPP40	100	78.495	ENSOANG00000001200	RPP40	92	78.495	Ornithorhynchus_anatinus
ENSSHAG00000002102	RPP40	99	71.377	ENSOCUG00000000354	RPP40	76	71.377	Oryctolagus_cuniculus
ENSSHAG00000002102	RPP40	99	38.182	ENSORLG00000008242	-	75	38.182	Oryzias_latipes
ENSSHAG00000002102	RPP40	99	37.818	ENSORLG00020013745	-	69	37.818	Oryzias_latipes_hni
ENSSHAG00000002102	RPP40	99	38.182	ENSORLG00015000887	-	75	38.182	Oryzias_latipes_hsok
ENSSHAG00000002102	RPP40	99	38.043	ENSOMEG00000002747	rpp40	75	38.043	Oryzias_melastigma
ENSSHAG00000002102	RPP40	100	79.856	ENSOGAG00000006055	RPP40	77	79.856	Otolemur_garnettii
ENSSHAG00000002102	RPP40	100	76.978	ENSOARG00000018783	RPP40	92	76.978	Ovis_aries
ENSSHAG00000002102	RPP40	100	79.137	ENSPPAG00000023703	RPP40	77	79.137	Pan_paniscus
ENSSHAG00000002102	RPP40	100	78.417	ENSPPRG00000005612	RPP40	77	78.417	Panthera_pardus
ENSSHAG00000002102	RPP40	100	69.424	ENSPTIG00000018847	RPP40	76	69.424	Panthera_tigris_altaica
ENSSHAG00000002102	RPP40	100	79.137	ENSPTRG00000017690	RPP40	77	79.137	Pan_troglodytes
ENSSHAG00000002102	RPP40	100	78.777	ENSPANG00000017865	RPP40	77	78.777	Papio_anubis
ENSSHAG00000002102	RPP40	99	50.545	ENSPKIG00000006311	rpp40	76	50.545	Paramormyrops_kingsleyae
ENSSHAG00000002102	RPP40	80	73.874	ENSPSIG00000007854	RPP40	100	73.874	Pelodiscus_sinensis
ENSSHAG00000002102	RPP40	96	74.532	ENSPEMG00000020809	Rpp40	79	74.525	Peromyscus_maniculatus_bairdii
ENSSHAG00000002102	RPP40	99	45.818	ENSPMAG00000008412	rpp40	99	45.818	Petromyzon_marinus
ENSSHAG00000002102	RPP40	100	93.525	ENSPCIG00000010682	RPP40	77	93.525	Phascolarctos_cinereus
ENSSHAG00000002102	RPP40	99	37.681	ENSPFOG00000011460	rpp40	75	37.681	Poecilia_formosa
ENSSHAG00000002102	RPP40	99	37.591	ENSPLAG00000001334	rpp40	75	37.591	Poecilia_latipinna
ENSSHAG00000002102	RPP40	99	37.956	ENSPMEG00000007721	rpp40	75	37.956	Poecilia_mexicana
ENSSHAG00000002102	RPP40	99	38.321	ENSPREG00000009215	rpp40	75	38.321	Poecilia_reticulata
ENSSHAG00000002102	RPP40	100	79.856	ENSPPYG00000016194	RPP40	77	79.856	Pongo_abelii
ENSSHAG00000002102	RPP40	100	80.576	ENSPCOG00000003907	RPP40	77	80.576	Propithecus_coquereli
ENSSHAG00000002102	RPP40	100	80.576	ENSPVAG00000011325	RPP40	77	80.576	Pteropus_vampyrus
ENSSHAG00000002102	RPP40	95	38.113	ENSPNYG00000004432	rpp40	88	38.113	Pundamilia_nyererei
ENSSHAG00000002102	RPP40	99	48.000	ENSPNAG00000019125	rpp40	76	48.000	Pygocentrus_nattereri
ENSSHAG00000002102	RPP40	100	75.899	ENSRNOG00000016226	Rpp40	92	75.899	Rattus_norvegicus
ENSSHAG00000002102	RPP40	100	79.137	ENSRBIG00000035800	RPP40	92	79.137	Rhinopithecus_bieti
ENSSHAG00000002102	RPP40	100	79.137	ENSRROG00000039116	RPP40	77	79.137	Rhinopithecus_roxellana
ENSSHAG00000002102	RPP40	100	77.698	ENSSBOG00000020297	RPP40	77	77.698	Saimiri_boliviensis_boliviensis
ENSSHAG00000002102	RPP40	99	52.536	ENSSFOG00015001142	rpp40	62	52.536	Scleropages_formosus
ENSSHAG00000002102	RPP40	99	38.686	ENSSDUG00000007202	rpp40	75	38.686	Seriola_dumerili
ENSSHAG00000002102	RPP40	99	39.051	ENSSLDG00000017563	rpp40	75	39.051	Seriola_lalandi_dorsalis
ENSSHAG00000002102	RPP40	100	71.942	ENSSPUG00000017487	-	76	71.942	Sphenodon_punctatus
ENSSHAG00000002102	RPP40	100	69.065	ENSSPUG00000018950	-	94	69.065	Sphenodon_punctatus
ENSSHAG00000002102	RPP40	99	39.781	ENSSPAG00000022716	rpp40	75	39.781	Stegastes_partitus
ENSSHAG00000002102	RPP40	100	74.820	ENSSSCG00000000998	RPP40	92	74.820	Sus_scrofa
ENSSHAG00000002102	RPP40	100	73.022	ENSTGUG00000002258	-	78	73.022	Taeniopygia_guttata
ENSSHAG00000002102	RPP40	64	74.011	ENSTGUG00000015246	-	100	74.011	Taeniopygia_guttata
ENSSHAG00000002102	RPP40	99	39.051	ENSTRUG00000003755	rpp40	76	39.051	Takifugu_rubripes
ENSSHAG00000002102	RPP40	99	37.226	ENSTNIG00000003077	rpp40	75	37.226	Tetraodon_nigroviridis
ENSSHAG00000002102	RPP40	90	58.800	ENSTBEG00000014467	-	73	58.800	Tupaia_belangeri
ENSSHAG00000002102	RPP40	90	77.600	ENSTTRG00000007319	RPP40	69	77.600	Tursiops_truncatus
ENSSHAG00000002102	RPP40	100	78.777	ENSUAMG00000002159	RPP40	92	78.777	Ursus_americanus
ENSSHAG00000002102	RPP40	100	78.777	ENSUMAG00000018639	RPP40	72	78.777	Ursus_maritimus
ENSSHAG00000002102	RPP40	65	60.989	ENSVPAG00000004652	-	63	60.989	Vicugna_pacos
ENSSHAG00000002102	RPP40	100	79.856	ENSVVUG00000005451	RPP40	77	79.856	Vulpes_vulpes
ENSSHAG00000002102	RPP40	99	61.091	ENSXETG00000017617	rpp40	76	61.091	Xenopus_tropicalis
ENSSHAG00000002102	RPP40	51	57.895	ENSXCOG00000019991	-	66	31.022	Xiphophorus_couchianus