EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002161 (Gene tree)
Gene ID: 100929516
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 7945 bases
Position: chrGL864754.1:24871-32815
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002440	Gar1	PF04410.14	2.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002466	GAR1-201	712	-	ENSSHAP00000002440	233 (aa)	-	G3VGY6

Gene Model

Click here to download ENSSHAG00000002161's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002161	GAR1	61	84.397	ENSAMEG00000004605	GAR1	52	92.453	Ailuropoda_melanoleuca
ENSSHAG00000002161	GAR1	53	81.452	ENSAPLG00000010926	GAR1	59	85.981	Anas_platyrhynchos
ENSSHAG00000002161	GAR1	81	71.724	ENSCHIG00000011049	-	53	80.189	Capra_hircus
ENSSHAG00000002161	GAR1	55	83.465	ENSCHIG00000016026	-	51	93.396	Capra_hircus
ENSSHAG00000002161	GAR1	87	77.273	ENSTSYG00000026632	-	54	84.906	Carlito_syrichta
ENSSHAG00000002161	GAR1	62	54.483	ENSCING00000005744	-	51	67.961	Ciona_intestinalis
ENSSHAG00000002161	GAR1	67	70.513	ENSCVAG00000002103	gar1	50	92.308	Cyprinodon_variegatus
ENSSHAG00000002161	GAR1	86	81.333	ENSGAFG00000016833	gar1	68	76.730	Gambusia_affinis
ENSSHAG00000002161	GAR1	53	69.106	ENSGGOG00000036205	-	53	75.472	Gorilla_gorilla
ENSSHAG00000002161	GAR1	85	90.164	ENSMMOG00000004156	gar1	51	93.269	Mola_mola
ENSSHAG00000002161	GAR1	97	80.795	ENSMALG00000009672	gar1	67	80.556	Monopterus_albus
ENSSHAG00000002161	GAR1	79	72.388	ENSNLEG00000034282	-	54	77.358	Nomascus_leucogenys
ENSSHAG00000002161	GAR1	66	74.675	ENSPEMG00000015838	Gar1	75	96.610	Peromyscus_maniculatus_bairdii
ENSSHAG00000002161	GAR1	67	70.323	ENSPMEG00000009320	gar1	50	92.308	Poecilia_mexicana
ENSSHAG00000002161	GAR1	69	90.909	ENSPREG00000010377	gar1	55	83.594	Poecilia_reticulata
ENSSHAG00000002161	GAR1	60	84.173	ENSPCOG00000027049	GAR1	54	93.396	Propithecus_coquereli
ENSSHAG00000002161	GAR1	61	67.606	ENSRBIG00000042411	-	51	75.472	Rhinopithecus_bieti
ENSSHAG00000002161	GAR1	58	76.471	ENSSPUG00000008707	GAR1	60	89.720	Sphenodon_punctatus
ENSSHAG00000002161	GAR1	50	87.931	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSSHAG00000002161	GAR1	55	75.194	ENSTRUG00000020580	gar1	50	89.423	Takifugu_rubripes
ENSSHAG00000002161	GAR1	69	67.702	ENSTNIG00000013023	gar1	59	92.308	Tetraodon_nigroviridis
ENSSHAG00000002161	GAR1	64	74.000	ENSUMAG00000000776	GAR1	51	93.396	Ursus_maritimus
ENSSHAG00000002161	GAR1	60	86.429	ENSVVUG00000017612	GAR1	55	93.396	Vulpes_vulpes
ENSSHAG00000002161	GAR1	79	87.970	ENSXCOG00000014843	GAR1	61	80.556	Xiphophorus_couchianus