EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002194 (Gene tree)
Gene ID: 100919511
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 7921 bases
Position: chrGL850518.1:25717-33637
Accession: 100919511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002479	RRM_1	PF00076.22	4.3e-18	1	1
ENSSHAP00000002479	U1snRNP70_N	PF12220.8	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002506	SNRNP70-201	2824	-	ENSSHAP00000002479	426 (aa)	XP_012402589	G3VH25

Gene Model

Click here to download ENSSHAG00000002194's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002194's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002194	SNRNP70	100	88.710	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSSHAG00000002194	SNRNP70	52	95.964	ENSAMEG00000014468	SNRNP70	50	94.037	Ailuropoda_melanoleuca
ENSSHAG00000002194	SNRNP70	99	72.848	ENSACAG00000013276	SNRNP70	99	73.077	Anolis_carolinensis
ENSSHAG00000002194	SNRNP70	65	100.000	ENSANAG00000036787	SNRNP70	99	97.561	Aotus_nancymaae
ENSSHAG00000002194	SNRNP70	58	49.606	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSSHAG00000002194	SNRNP70	65	100.000	ENSCJAG00000000193	SNRNP70	99	97.561	Callithrix_jacchus
ENSSHAG00000002194	SNRNP70	52	100.000	ENSCAFG00000003711	SNRNP70	99	97.561	Canis_familiaris
ENSSHAG00000002194	SNRNP70	52	96.875	ENSCAFG00020025470	SNRNP70	99	93.373	Canis_lupus_dingo
ENSSHAG00000002194	SNRNP70	65	100.000	ENSCATG00000016149	SNRNP70	100	89.391	Cercocebus_atys
ENSSHAG00000002194	SNRNP70	52	100.000	ENSCLAG00000007991	SNRNP70	50	100.000	Chinchilla_lanigera
ENSSHAG00000002194	SNRNP70	100	88.710	ENSCSAG00000002759	SNRNP70	100	91.244	Chlorocebus_sabaeus
ENSSHAG00000002194	SNRNP70	100	71.681	ENSCPBG00000014841	SNRNP70	99	69.910	Chrysemys_picta_bellii
ENSSHAG00000002194	SNRNP70	65	100.000	ENSCANG00000036607	SNRNP70	99	95.122	Colobus_angolensis_palliatus
ENSSHAG00000002194	SNRNP70	52	91.441	ENSCSEG00000011978	snrnp70	96	91.705	Cynoglossus_semilaevis
ENSSHAG00000002194	SNRNP70	52	90.991	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSSHAG00000002194	SNRNP70	52	100.000	ENSEASG00005004917	SNRNP70	50	100.000	Equus_asinus_asinus
ENSSHAG00000002194	SNRNP70	52	76.577	ENSEEUG00000005666	SNRNP70	100	78.005	Erinaceus_europaeus
ENSSHAG00000002194	SNRNP70	52	100.000	ENSFCAG00000042603	SNRNP70	52	100.000	Felis_catus
ENSSHAG00000002194	SNRNP70	82	94.904	ENSFDAG00000013830	SNRNP70	100	94.904	Fukomys_damarensis
ENSSHAG00000002194	SNRNP70	52	91.403	ENSGMOG00000011492	snrnp70	96	91.244	Gadus_morhua
ENSSHAG00000002194	SNRNP70	52	91.892	ENSGACG00000000448	snrnp70	68	91.705	Gasterosteus_aculeatus
ENSSHAG00000002194	SNRNP70	65	100.000	ENSGGOG00000008245	SNRNP70	99	97.561	Gorilla_gorilla
ENSSHAG00000002194	SNRNP70	52	100.000	ENSLAFG00000028536	SNRNP70	96	100.000	Loxodonta_africana
ENSSHAG00000002194	SNRNP70	65	100.000	ENSMFAG00000039824	SNRNP70	100	89.391	Macaca_fascicularis
ENSSHAG00000002194	SNRNP70	100	88.710	ENSMMUG00000004928	SNRNP70	99	97.561	Macaca_mulatta
ENSSHAG00000002194	SNRNP70	100	76.389	ENSMNEG00000038057	SNRNP70	51	100.000	Macaca_nemestrina
ENSSHAG00000002194	SNRNP70	65	100.000	ENSMLEG00000030967	SNRNP70	100	89.391	Mandrillus_leucophaeus
ENSSHAG00000002194	SNRNP70	64	100.000	ENSMICG00000038437	SNRNP70	99	97.561	Microcebus_murinus
ENSSHAG00000002194	SNRNP70	52	100.000	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSSHAG00000002194	SNRNP70	52	100.000	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSSHAG00000002194	SNRNP70	52	100.000	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSSHAG00000002194	SNRNP70	52	100.000	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSSHAG00000002194	SNRNP70	52	100.000	ENSMPUG00000003258	SNRNP70	50	100.000	Mustela_putorius_furo
ENSSHAG00000002194	SNRNP70	52	100.000	ENSMLUG00000011766	SNRNP70	50	100.000	Myotis_lucifugus
ENSSHAG00000002194	SNRNP70	52	100.000	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSSHAG00000002194	SNRNP70	52	92.342	ENSNBRG00000003126	snrnp70	93	92.627	Neolamprologus_brichardi
ENSSHAG00000002194	SNRNP70	64	100.000	ENSNLEG00000004899	SNRNP70	98	95.062	Nomascus_leucogenys
ENSSHAG00000002194	SNRNP70	79	96.765	ENSMEUG00000015650	SNRNP70	100	96.765	Notamacropus_eugenii
ENSSHAG00000002194	SNRNP70	52	91.892	ENSONIG00000007822	snrnp70	51	92.166	Oreochromis_niloticus
ENSSHAG00000002194	SNRNP70	52	99.550	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSSHAG00000002194	SNRNP70	52	99.552	ENSOGAG00000029310	SNRNP70	50	97.706	Otolemur_garnettii
ENSSHAG00000002194	SNRNP70	80	100.000	ENSOARG00000012608	SNRNP70	93	100.000	Ovis_aries
ENSSHAG00000002194	SNRNP70	65	100.000	ENSPPAG00000035067	SNRNP70	99	97.561	Pan_paniscus
ENSSHAG00000002194	SNRNP70	52	100.000	ENSPPRG00000005579	SNRNP70	50	100.000	Panthera_pardus
ENSSHAG00000002194	SNRNP70	65	100.000	ENSPTRG00000011277	SNRNP70	99	97.561	Pan_troglodytes
ENSSHAG00000002194	SNRNP70	65	100.000	ENSPANG00000004068	SNRNP70	100	89.391	Papio_anubis
ENSSHAG00000002194	SNRNP70	52	87.838	ENSPSIG00000015251	SNRNP70	86	85.388	Pelodiscus_sinensis
ENSSHAG00000002194	SNRNP70	100	98.826	ENSPCIG00000007296	SNRNP70	100	98.826	Phascolarctos_cinereus
ENSSHAG00000002194	SNRNP70	52	99.099	ENSPPYG00000010234	SNRNP70	100	88.939	Pongo_abelii
ENSSHAG00000002194	SNRNP70	52	91.441	ENSPCOG00000023103	SNRNP70	77	91.244	Propithecus_coquereli
ENSSHAG00000002194	SNRNP70	52	93.694	ENSPVAG00000009578	SNRNP70	50	93.548	Pteropus_vampyrus
ENSSHAG00000002194	SNRNP70	65	100.000	ENSRBIG00000042387	SNRNP70	100	89.165	Rhinopithecus_bieti
ENSSHAG00000002194	SNRNP70	65	100.000	ENSRROG00000033636	SNRNP70	100	89.391	Rhinopithecus_roxellana
ENSSHAG00000002194	SNRNP70	65	100.000	ENSSBOG00000020026	SNRNP70	99	97.561	Saimiri_boliviensis_boliviensis
ENSSHAG00000002194	SNRNP70	100	64.912	ENSSPUG00000016621	SNRNP70	51	98.618	Sphenodon_punctatus
ENSSHAG00000002194	SNRNP70	52	100.000	ENSUAMG00000016147	SNRNP70	50	100.000	Ursus_americanus
ENSSHAG00000002194	SNRNP70	58	94.942	ENSUMAG00000001467	SNRNP70	99	97.561	Ursus_maritimus
ENSSHAG00000002194	SNRNP70	52	85.520	ENSVPAG00000005959	-	98	80.645	Vicugna_pacos
ENSSHAG00000002194	SNRNP70	52	100.000	ENSVVUG00000022976	SNRNP70	99	97.561	Vulpes_vulpes