EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002222 (Gene tree)
Gene ID: 100924258
Gene Symbol: -
Alias: -
Full Name: nucleolar and coiled-body phosphoprotein 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 13557 bases
Position: chrGL834466.1:26301-39857
Accession: 100924258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002510	SRP40_C	PF05022.12	1.1e-28	1	1
ENSSHAP00000002509	SRP40_C	PF05022.12	1.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002537	-	5549	-	ENSSHAP00000002509	784 (aa)	XP_003755490	G3VH55
ENSSHAT00000002538	-	5300	-	ENSSHAP00000002510	701 (aa)	-	G3VH56

Gene Model

Click here to download ENSSHAG00000002222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002222	-	68	51.462	ENSG00000166197	NOLC1	93	69.767	Homo_sapiens
ENSSHAG00000002222	-	50	81.905	ENSBTAG00000007435	NOLC1	60	76.033	Bos_taurus
ENSSHAG00000002222	-	58	76.860	ENSCAFG00000010062	NOLC1	63	76.860	Canis_familiaris
ENSSHAG00000002222	-	74	53.310	ENSCHIG00000016755	NOLC1	62	69.672	Capra_hircus
ENSSHAG00000002222	-	73	52.661	ENSSTOG00000002168	NOLC1	100	51.150	Ictidomys_tridecemlineatus
ENSSHAG00000002222	-	52	73.418	ENSLAFG00000014245	NOLC1	64	46.042	Loxodonta_africana
ENSSHAG00000002222	-	100	52.853	MGP_PahariEiJ_G0014517	Nolc1	62	77.686	Mus_pahari
ENSSHAG00000002222	-	59	76.033	ENSMPUG00000016887	NOLC1	63	76.033	Mustela_putorius_furo
ENSSHAG00000002222	-	89	75.872	ENSMEUG00000013848	NOLC1	92	78.788	Notamacropus_eugenii
ENSSHAG00000002222	-	100	81.602	ENSPCIG00000029012	-	100	82.331	Phascolarctos_cinereus
ENSSHAG00000002222	-	53	69.333	ENSPCOG00000019070	-	67	67.516	Propithecus_coquereli